Acanthaster planci (crown-of-thorns starfish): 110981122
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Entry
110981122 CDS
T05078
Name
(RefSeq) DNA-binding protein SMUBP-2-like
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aplc03009
]
110981122
03012 Translation factors [BR:
aplc03012
]
110981122
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
110981122
5.6.2.5 RNA 5'-3' helicase
110981122
Ribosome biogenesis [BR:
aplc03009
]
Eukaryotic type
Other ribosome biogenesis factors
110981122
Translation factors [BR:
aplc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
110981122
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
Viral_helicase1
nSTAND3
UvrD-helicase
Flavi_DEAD
SLFN-g3_helicase
ResIII
AAA_16
AAA_22
DEAD
AAA
Helicase_RecD
DnaB_C
cobW
IstB_IS21
SRP54
CbiA
Herpes_ori_bp
RuvB_N
NTPase_1
UvrD_C_2
NPHP3_N
AAA_7
KOW2_Spt5
ATP-synt_ab
V_ATPase_I_N
Motif
Other DBs
NCBI-GeneID:
110981122
NCBI-ProteinID:
XP_022094082
UniProt:
A0A8B7YN41
LinkDB
All DBs
Position
Unknown
AA seq
1059 aa
AA seq
DB search
MAVREFIKKQSELLALEREAEIAETSALAENVPLKELQRRGVCLLKLHPASQSTGLYGRT
LVTFAPRKGHGDGTLPTHNISSGDIVGVSPSHGGGASSTEDPSGIVSRVTQSSITVAFDH
KDTEGPVTFEYEGLYRLTKLANDVTYRRLKRSLSDLDACSSSQAHHLVDVLFGEADVSPP
SLPLPQPRQPAESAELQFFNENLDRSQREAVTFALGQRDVAIIHGPPGTGKTTTIVEIIR
QAVKQKLKVLACAPSNVAVDNLVERLAAGKVHIVRLGHPARLLHSIQRYALDAILASSEE
AGIVRDVRKEIDQTRTLLSKTKQAGEKRRLRDEARTLRKELREREQHAVQEILQRADVVL
ATNTGASPTGPLSHLPREHFDLAVVDECAQALEAGCWIPLLLAPRCVLAGDHQQLPPTIL
SDRAAADGLAVSLMERAVKLHDDKITRMLTTQYRMNSAIMRWSSDALYDGKLAADESVAR
HLLKDLPGVEQNEDTSLPLLLIDTAGCGLEELDLESEVSKGNEGEADLVAVHIERLLDSG
VPAWEIAVIAPYNLQVELLRLRLSGRHPDLEIKSVDGFQGREKEAVVISLVRSNSKGEVG
FLAEDRRINVAVTRARRHVAVICDSDTIRHHGFLKNLVEYMEANGEVRSAFQYQDEIDLS
SSDAPRPDYLKFRQSKPSIKKDKGAKPKQPRPKEKRHHTSDTKTRSFDPEVSAKREAELT
AQVQSFAKDRTADRLAFPPTLNSHDRLVVHQAAEQLGLYHSSIGEGRDRHIIISSQPIRT
DVAESKSSSHGSDGKDSTDSVEEKLANVHVDAVLEELRTENLMDVIIGADHDGTDVLSLD
AEGNVEKENTDLVNVRDGAIKDINCQGEASFAQKARPPKQETKSSEEATDLHKCKFCKKK
LPPGSVLLHEIHCEKKMEEKRRLQEVSKTKKKTDKSKQRNALEHTTEEDFDKLIALAVES
DNRCNFVRCAERIALTGVRCAFCNRRYCFGHAMPEVHGCGEMARAHARKVVHREKEVWAG
SGTRERKVDPTRRAQLERKLEKKRGEMEEKRTRKSAKKK
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgagggaatttatcaagaagcaaagtgaactactggctcttgagagagaagca
gaaatagccgaaacaagtgcgctagcagaaaatgtacccctgaaggaattacagcggcgt
ggtgtttgcttgctgaagcttcatccagccagccaatccacaggactttatgggaggaca
ttagttaccttcgcacccagaaaaggccatggtgatggcacactgccgacgcataacatc
agttcaggagacattgtcggtgtaagcccctcccatgggggcggggcttcctctactgag
gatccatctggcattgtttcgagagtcacacagtcgtcaatcaccgtcgcattcgatcac
aaagacacagagggacctgttaccttcgagtacgagggactgtacaggttgactaaactc
gccaacgatgtcacgtaccgaaggttaaaaaggtccctttcagatcttgatgcctgctcc
tcgagccaggctcatcatctggtcgatgttttgtttggggaagcggatgtcagtcctcca
tccctgcctctaccccagcctcggcaaccagcagagtcggccgagctgcaatttttcaat
gaaaatctagaccggtcccagcgggaggccgtgacatttgccctcggccagcgagatgtc
gccatcatccacggaccccctggcacggggaagacgacaaccatcgtggagattatcaga
caggctgtcaagcaaaaactaaaggtgttggcttgtgcaccgtccaacgtcgccgtagac
aatctagtggagagactggccgctggcaaggtgcacattgtccgccttggccaccccgca
aggctcttgcactccatccagagatacgccctggacgccatcttggcatccagcgaagag
gcagggatcgtccgtgacgtaaggaaggagattgatcagaccaggaccctgctatccaag
acgaagcaggccggtgagaaacgccgtctgagagacgaggcccggaccctacgcaaggag
ctccgagaacgggaacagcacgccgtccaagagatcctccagcgggcagatgttgtcctg
gctaccaacaccggggcctcgcctacggggcccctgagtcacctccccagggagcatttt
gacctggcggtcgtggacgagtgtgcccaggccctggaagccggttgctggatacccctc
ctgttggcaccgcgctgcgtcctcgccggagaccaccagcagctgccacccacgattctc
tcagacagagcagcagcagatggactcgcagtgtctctcatggagcgtgccgtcaagctc
catgacgacaagatcacccgcatgctgactacccagtaccgcatgaacagcgccatcatg
cggtggagctccgacgcgctgtatgacggaaagctagcagcagatgagtcagttgcaaga
cacctcctgaaagatcttcccggggtggagcagaacgaggacacgtccttgccgctgttg
ctcatcgacacggctggctgcggcctagaggaactggacctggaatcggaggtgtccaaa
ggcaacgaaggggaggcagatctggtggctgtccacatcgagcggctcctggacagcggg
gtaccggcttgggagattgccgtgattgcaccctacaacttgcaggtggagctccttcga
ctgcgactcagcggaaggcaccctgacctagagatcaagtcagttgatggcttccaagga
cgagagaaggaagctgtggtgatctccctcgtgcgatccaacagcaaaggggaggttgga
ttcttggctgaggatcgccgcatcaacgtggcagtcacgcgagcccgccgccacgtcgcg
gtcatctgcgattcagacaccatccgccatcatggcttcctgaagaacctagtggagtac
atggaagccaacggagaagtcaggagtgctttccagtatcaggatgaaattgacttgagc
agcagtgatgcccccaggccagattatctgaagttccgtcagagcaaaccatccatcaag
aaggacaagggggctaaacccaagcagccccgcccaaaagagaagcgtcaccacacctcc
gataccaagacaaggtcatttgatccagaagtctctgcaaagcgagaggctgaactgaca
gcgcaagtccaaagttttgccaaggatcgaaccgcagatcggctggcatttcctcctact
ctgaactctcatgaccgcttggttgttcatcaggctgctgaacaattgggtctctaccat
tccagcataggggagggtcgagatcgacacatcatcatcagcagccagccaatcaggact
gatgtagccgagtcaaaaagtagctcccatggctctgatggaaaagattcaactgattca
gtggaggaaaaactagccaatgtacatgttgatgctgtcctcgaagaattgaggacagaa
aacctgatggacgtcatcattggtgctgaccatgatggaacagatgtgctatcccttgat
gccgagggaaacgttgaaaaggaaaataccgatctagtcaatgtcagagacggtgcaatc
aaggatataaattgtcaaggggaggcgagctttgctcagaaagcgcgacccccaaaacaa
gagaccaagtcttccgaggaggcgactgatcttcacaaatgcaaattctgcaaaaagaaa
ctgccgccggggagtgtgctccttcacgagatccactgcgagaaaaagatggaggagaag
cgacgtctccaggaggtctcgaaaaccaagaagaagacggacaagtccaagcagcgcaac
gccctggagcacaccacagaggaagactttgacaagctgatcgccttggcggtggagtcg
gacaaccgctgcaactttgtccggtgcgccgagaggatcgcgctgacgggcgtgcggtgc
gccttctgcaaccggcgctactgcttcggccacgccatgcccgaggtgcacggctgcggg
gagatggcccgggcccacgcccggaaggttgtgcaccgggagaaggaggtgtgggctggg
tctgggacacgggagaggaaggtggaccccacccgccgggcccagctagagaggaagctg
gagaagaagcggggcgagatggaggagaagagaaccaggaaatcagccaagaagaaatga
DBGET
integrated database retrieval system
