Acanthaster planci (crown-of-thorns starfish): 110982237
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Entry
110982237 CDS
T05078
Name
(RefSeq) ATP-dependent RNA helicase DDX55-like isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aplc03009
]
110982237
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110982237
Ribosome biogenesis [BR:
aplc03009
]
Eukaryotic type
Pre-60S particles
Helicases
110982237
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
110982237
NCBI-ProteinID:
XP_022096211
UniProt:
A0A8B7YY78
LinkDB
All DBs
Position
Unknown
AA seq
591 aa
AA seq
DB search
MEGHWESLPVSLSKTTHKSLQQMGFDRMTPVQAAAIPLFMNNKDVAAEAVTGSGKTLAFV
IPILEILLRRETPLKKREVGAIILTPTRELALQIDEVLSDFTTFLPQLTQQLVIGGSNLA
NDIKQIQDKGANIIVATPGRLEDLFQRKDFGLNLPAMVRSLEVLVLDEADRLLDMGFKTS
INMILSYLPKQRRTGLFSATQTDEVEALIRAGLRNPVRITVKEKKTSANVIQKTPMTLKN
YYLICESDEKFNLLIAFLRKHREEKHMIFFSTCHCVDYFSKALREILKKTTVLSLHGKMK
RRRNAVFSEFRKLNSGVLVCTDVMARGVDIPEVHWVLQYDPPSNASAFVHRCGRTARIGN
TGNALVFLLPTEDAYVDFIQLNQKTPLQRYPIHEEVEKIDVLPRLRKIAQKDRAMFEGGT
RAFVSFVQAYSKHECSLIFRLKDLDFARLARGFALLRMPKMPELKGKTFPDFQTLDVDYS
AIPYREKAREKQRQTNMKRVQDGGGTSRKKGPKRKLQPWSKKQEIKEKRQDRRQRKEHAK
KKKRQLEEEDLNELMQDARLVKKLKTGKISDAEFDKEMGLKDASQEEEDLK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccactgggaaagtcttcccgtttctctcagcaaaacaactcataaatctctt
cagcagatgggctttgatcgcatgacacctgtacaggcagctgcgattcctctcttcatg
aacaataaggatgttgcagcagaagcagtgactgggagtggcaagacattggcctttgtc
attcccatcttggagatcctactgaggagagaaacaccgctaaagaaaagagaggttggc
gcaatcattttaacccctaccagggagttggccctacagatcgatgaagtcctgtcagat
tttaccaccttcctgccccagttaacccagcagttggtaattggtggcagcaaccttgcc
aacgacatcaagcagatacaggacaaaggggccaacattattgtcgccacccccggtcgc
ttagaggatctcttccagcgcaaggactttgggctgaatcttccagcaatggtcagatcc
ctggaggttcttgtactggatgaggctgataggcttctggacatgggctttaaaacaagt
attaatatgattttgagctacctacccaagcagcgacggacaggtcttttctcggcaacg
cagactgatgaggttgaagcgttgatccgggctggtctgagaaatccagtgcgcatcaca
gtgaaggagaaaaagacatcggccaatgtcatacaaaaaacacccatgacattgaaaaat
tactatctgatatgtgagagcgacgagaaattcaatttgttgatagcgttcctgcggaaa
cacagggaggagaagcacatgattttcttcagcacctgtcactgtgtggactacttctcc
aaggcgctgagagagatcctgaagaagacgacggtgctctccctgcatgggaagatgaag
cggaggcggaatgctgtcttctcggagttcaggaagctcaacagtggtgtgcttgtttgt
accgacgtcatggccagaggagttgacattcctgaggtccattgggtgctgcagtatgac
ccaccaagtaatgcaagtgcctttgtccaccgctgtggaaggacagccaggataggcaat
accggtaacgctctggtctttctgctgcccacggaagatgcctacgtggacttcattcag
cttaatcaaaagactccgcttcagagatatcccattcacgaggaagtagagaagatagac
gtcctgccaaggctgagaaagatagcacagaaggatagggcaatgtttgaaggagggacc
cgggcatttgtgtcatttgtgcaggcctattccaaacacgaatgcagtttaatcttcagg
ttaaaagatctcgactttgctcggttggccaggggctttgccctactgcgcatgcccaag
atgccggaactcaagggcaagactttccccgacttccagacactagacgttgactacagt
gccatcccctacagggaaaaagctagagagaagcagagacaaactaacatgaagcgggta
caagatggcggaggtacctccaggaagaaaggaccaaagagaaaacttcagccatggtcg
aagaaacaggaaataaaggagaagagacaggacaggaggcagagaaaagagcacgccaag
aagaagaagagacagcttgaggaagaggacttaaatgagctgatgcaggatgcaagactg
gtcaagaaacttaaaactggaaagatatctgatgccgaatttgacaaagaaatgggcctc
aaggatgccagtcaagaagaggaagacctcaagtag
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