Acanthaster planci (crown-of-thorns starfish): 110982473
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Entry
110982473 CDS
T05078
Name
(RefSeq) protein RRP5 homolog
KO
K14792
rRNA biogenesis protein RRP5
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aplc03009
]
110982473
Ribosome biogenesis [BR:
aplc03009
]
Eukaryotic type
90S particles
Other 90S particles
110982473
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1_RRP5
S1
OB_RRP5_4th
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
Spt6_S1
HAT_Syf1_CNRKL1_C
Suf
NRDE-2
OB_RRP5
TPR_19
UTP6_C
DUF2110
PPR
TPR_CcmH_CycH
ProQ_C
PPR_2
Motif
Other DBs
NCBI-GeneID:
110982473
NCBI-ProteinID:
XP_022096574
UniProt:
A0A8B7YTF6
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MDEESFPRGRGKNKIDSSLTQKPVKRKHDQLVLFEDDGASGKERKVTLRKEKKSKKPKLS
GDDDEESLPKQFEYDEETEEHIDSIGERPKAAPETVPKFSQLTHKTISADMLILGVVKEV
HEYEIVVSLPNMMTGYVQITDVSFTYTKLLEMLGDDSIELSEDMQDVPSLQTLFTVGHQV
VCKVKSVGSTGTGRQRIQLTLDPQAIHSQLNPGMLKPGMIISGSVSSIEDHGYVVDVGIP
GVNSFLSSGLAEAFIMTNNQGQPLSIAQPIKCLIKDVKSDGRSLVLSANPSSVAKATAKM
SSHDSFVSLVPGTKVKATIQNINKDNIRVEFLSSYRGCIDQLHFEDNTKPSTEYEEKQVV
RACVIFHCPHSKSLGLSLMPAHTESPVQADQQPLFQGLCTGDIIKKAKVVRIDPKIGMLL
QLNDQDRGIVYLPHIADTKVTNPNSLYHVGSKVVCRILDFNLMDGIATVSMKQSVLDQPF
LGYHDIQPGCLVEGTLTAILEKGLSIKISDHVSGFVPRIHMADVIIHKPQGKFTVGELLE
LRVLYVNPERRRLLLTHKKSLVHSTLPVITSYDQPRRDMILHGFIISIKDFGYLVRFYND
ITGLIPRSELCTGPQPVPDGSYFIGQVVKCRVIKTYSPEAKRITLSLRLSATEDKQTKEI
DYKNPRMGKLTDVKVTKVRDLGLEVSIHPEGTPAFLPKVHLSDFVENCSLMLACYEKGDT
ITNAMHWSFSPTRNCAIVTCKPMLIEARQNKELVRGFSEVQSGTLVMGVVKRVMPYGIFI
ELPNNVVGLAPKAAMSDDFISSSNAFQIGQTLRARVSEVDHEKSRFLLSLKSSICLPKKG
EGQSLLEKYFHERDVIIRKLANKEGWEKLLEIQIGSEVTARITQKVEGGVYCKLPNKLSG
YIPDAVIEEQADIEEGSKVKACVLHVDLSAKVAELTLDPEIIKFVALDAKKKKTPKKSKS
SEDTEAVVAMVKDDFILVCLKASGKLAYIPGRRHLNDIRTGVDVLIVGQTIKVTKQRMLN
NRILASQFVSNKKDPKPAPKKAGDATTTAEQKEKKKKTPQGVIEAHKLQLGQKVTAVVRS
VQECQLNVRVNHVITGRIHVTEITDKMVQNKFPLHKFKEGMELEAKVIGHREVKDHRYLP
ITHTNFTKLALDLTIRPSKLNDDKYIVEDESLQKQLQRYQSGQTISCVVQKYVENILWVL
VTGLLQGKVYQLNLCKNLGMLEHPAQYFLPGSVRKAKVVSVDHQHQVLELTLVGSGSTEL
TPGTVTNGRILKILSGIGLVIQLPFGYRGRVFLTDLRDHYTENALKGYREKQFVRCCVLE
VADKENVALSMRPSAVSKHHDPAINPDISSIQELSVGDVVKGYVKNFTKVGVFVSLSRKL
QGRIQLKNLSVSYIKEPEALFPKGRLLTVKVLNIDKKSHKIELSSSGLDTGADDPVPKHL
GSPKPKPRKRRRQDSQGSDLDSGLEEPETLSDSEVEVVHTPRQDTPVARLQVTSGFTWDT
NPKVKDARGETMFLGDQEDSGSDESEAEAEQTSLEEPQPKKSKKEKQAAEKAEEDLLYKM
ERELMEVDRTPETAEEFDRLVLSSPDSSLMWVRYMAFHLQSAEIEKARAVAERALKTINF
REEQEKLNVWVAFMNLENLYGSEETLLKVFERALLHCEPLKVFQNLVSIYSRTGKLESAE
QLYKSMVKRFNLKKDVWISYGSFLMQNGRQDDAHKLMQRSFKSLMPKEHNDVIVKFAQME
FKFGEAERGKTMFENILSNYPKRTDIWSVYLDMMIKQADVKAIR
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaagctttccccgtggtcgtggcaaaaacaagattgactcatccctgacg
caaaagcctgtcaagagaaaacatgaccagttggttctgtttgaggatgatggtgcatca
ggcaaggagaggaaagtgacactcaggaaggagaagaaatccaagaagccaaagctgagt
ggagatgatgatgaggagtcacttccgaagcagtttgagtatgatgaggagacagaagaa
cacatagacagcattggtgagaggcctaaggctgcacctgagactgttccaaagttctct
caactcacgcacaagaccatatcagcagacatgcttatattgggagtggtgaaagaagtc
catgagtacgagattgttgtcagtcttcccaacatgatgactggctatgtgcagatcacc
gatgtgtcatttacctataccaaactattagaaatgttgggggatgattcgattgagctt
tctgaagatatgcaggatgtacccagtctacagaccctcttcactgtgggtcatcaggtt
gtctgcaaggtcaagtcagtagggtcaacagggacaggacggcagcggatccagttgacc
cttgacccccaggctatccactcacaattaaaccctggcatgttgaaaccaggaatgata
atatctggcagcgtgtccagcattgaggatcacgggtatgtcgttgatgtaggcatccct
ggagtgaacagctttctcagtagtggtttagctgaagcattcatcatgacaaacaaccaa
gggcaaccattgtccattgcccagccaatcaagtgcctcatcaaggacgtgaaatcggat
gggaggtctcttgttctctctgcaaatccaagctctgttgccaaggcgacggccaagatg
tcttcccatgacagttttgtctctcttgtgcccgggacaaaggtcaaagctaccattcaa
aatattaataaagacaacatcagggttgagttcctgtcttcatacaggggctgcatagac
caactacattttgaagacaacactaaaccttccactgagtacgaggaaaaacaagtggtg
cgagcatgtgtaatattccactgtcctcacagtaaatccctggggttgagcctgatgccg
gcgcacactgagtccccagtgcaggctgatcagcaacctctattccaaggcctgtgcact
ggtgacatcatcaagaaagccaaagttgtaaggatagatcccaaaattggaatgttgctt
caactgaatgaccaagacagaggcattgtttatcttccacatatagcagacacaaaggtt
accaatccgaacagtctgtaccacgtaggcagcaaggtagtctgtaggatattagacttc
aacttaatggatgggatagcaacagtctctatgaagcagtctgtgttggatcagccattc
cttggttaccatgacatccagcccggttgcttggtcgagggtacccttacagccatattg
gagaagggtctctccattaagatatctgatcatgtgagtgggtttgtacccagaattcac
atggctgatgtgatcattcataaaccgcagggcaaattcactgtcggcgagctgttggaa
ctcagggtgctgtacgtgaatccagagagacgtcgcctgctgctgacccacaagaaaagt
cttgtccattctacactgcctgtcataacctcttacgatcagcctcgcagggacatgata
ctgcacggtttcattatctcaatcaaggactttggctatctcgttcgtttctacaatgat
atcacaggtttgatcccacgttccgagctctgtactggcccacaaccagtaccagacggc
tcttacttcattggtcaagtagtcaagtgccgagtaatcaagacctactcaccagaagcc
aaacgcatcactctgtcactcaggctatcagcaacagaggataaacagaccaaggaaatt
gactataagaacccacgcatgggcaagctgacggatgttaaagtaacaaaggtcagagat
cttggacttgaggtcagcattcatcccgaaggcacccctgcatttcttcccaaagtgcac
ctgtcagactttgttgaaaattgcagcctgatgttggcatgttacgagaaaggtgacacc
ataaccaatgccatgcactggtcattctcacccaccagaaactgtgccattgtaacttgc
aaaccaatgctgatagaagccaggcaaaataaagagctggtccgaggcttcagcgaggtg
cagtcggggacactggtcatgggagtggtgaagcgagtaatgccgtatggaatcttcatt
gaactcccgaataacgtcgttggactagccccaaaagctgcaatgtcagatgatttcatc
agcagctccaacgccttccaaattggccagaccctaagagcccgagtctccgaggtggac
cacgagaaatctcgcttcctactgagtctcaagtcgtccatttgcctccctaagaagggc
gaggggcagagcttgctggaaaagtacttccatgagagggatgtgatcatcagaaaactg
gcaaacaaggaaggttgggagaagctcttggagattcagattggtagcgaagtcacggcc
aggataacccagaaagtagaaggaggtgtttattgtaaactgcccaacaaactctctgga
tacatcccagatgctgtcattgaagaacaagcagatattgaggaggggtcgaaggtcaaa
gcctgtgtcctgcatgtagacctcagtgctaaagtggctgaattaacccttgatccggaa
atcatcaaatttgttgccttggatgccaaaaagaagaagacgcccaagaagagcaagagt
tcagaggatacagaagcggtggttgccatggtgaaggatgatttcatcctggtgtgcttg
aaggcctctggcaagctggcttacattcctgggagaaggcatctcaatgacatacggaca
ggagttgatgtgctaatagttggacagacaataaaagttaccaaacaaaggatgctcaac
aatcgcatcttggcatcacagtttgtcagcaataagaaagaccctaagcctgctccaaag
aaagcaggagatgccaccacaacagctgaacaaaaggagaagaaaaagaagacaccccag
ggagtgattgaagctcacaagttacagctaggccaaaaggtcactgctgtggtgaggtct
gtacaagagtgtcagctgaatgtcagggtcaaccatgtgatcactggtagaatccatgtg
actgaaataactgataagatggttcagaataagtttccactgcacaaatttaaagagggt
atggagttggaggccaaggtcataggtcaccgtgaggtcaaggatcaccgctatcttccc
atcacacacaccaacttcaccaagttggcattggacctgaccatcagaccaagcaaactg
aatgatgacaagtacattgttgaagatgagtcattacagaaacaactgcagaggtatcaa
tcaggacagaccatcagctgtgtagtacaaaagtatgtggaaaacatcttgtgggtgttg
gtaaccggcttgctgcagggcaaagtgtaccagctaaacctgtgcaaaaatctgggcatg
ttggagcacccagcccagtactttttgccagggtccgtccggaaggccaaagttgtcagt
gtggaccaccagcaccaagttttagaactcacactagttggtagtggatccacagaactg
acccctggcacggtcaccaatggccggatattaaagatactgtctggcattggcctggtc
atccagttacccttcggatatcgtggtcgagtctttctaacagacctgagagaccactac
acagaaaatgcactgaagggctacagggagaaacagtttgtaagatgctgtgttttggag
gtggcagacaaagagaatgtagccttgtcaatgcgaccatctgctgtcagtaaacaccat
gatcctgccattaatccagacatatcgtccattcaggagctgtcagtaggagatgtagtc
aagggctatgtcaagaacttcaccaaagtcggtgtctttgtcagcctatcaagaaagctg
cagggccgaattcagctcaagaacctgtcagtctcgtacatcaaggaaccagaagcattg
ttccctaaaggcagacttcttaccgtaaaagttctcaacattgataaaaagtcccataag
attgagctgtcatcctctggtttagatacaggagcagatgacccagtacccaagcatctc
gggagtccaaagccaaagcccaggaagagaaggcgtcaagattcacaagggagcgattta
gacagtggcttggaagaaccggaaacactcagtgattcagaggtggaggttgtacataca
cctcgacaagacacaccagtggccaggctacaagtcacatctgggttcacttgggacact
aacccgaaggtgaaagatgcgagaggcgagacgatgttcctaggtgatcaggaggactcc
ggcagtgatgagagtgaggcggaggcggagcagaccagtctagaggagccgcagccaaag
aagagcaaaaaggagaaacaagcagcagagaaggcagaggaagatttgctgtataagatg
gagcgggagttgatggaagtcgaccgaaccccagagacagccgaagagtttgatcgcttg
gtcctgagctcaccagactcatcgctaatgtgggtgcgctacatggcgttccacctgcag
tctgctgagatagagaaagccagagcagtggctgagagagctctcaaaaccatcaatttc
agagaggagcaggagaagttgaatgtctgggtggccttcatgaaccttgaaaacctgtat
ggctcagaagagacattgctcaaggtgtttgagagagccctgctacactgtgagccgttg
aaagtcttccagaacctggtcagcatttactctcgcactggcaaacttgagtcagcagaa
caactgtacaaaagcatggtgaaacgcttcaacctgaagaaggatgtgtggatcagttac
ggttccttcctcatgcaaaatggtcggcaggatgacgcccacaaactcatgcagagaagc
ttcaagagcctgatgcccaaagaacacaatgacgtaattgtcaaatttgctcagatggag
tttaagtttggtgaagcagagaggggcaagacaatgtttgagaatatcctgagcaactac
cccaaacgaactgacatatggtcagtctacctggatatgatgatcaagcaagcagatgtg
aaagccattaggtaa
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integrated database retrieval system
