Acanthaster planci (crown-of-thorns starfish): 110983656
Help
Entry
110983656 CDS
T05078
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013
Nucleocytoplasmic transport
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110983656
03015 mRNA surveillance pathway
110983656
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110983656
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110983656
mRNA cycle factors
P-body specific factors
110983656
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110983656
NCBI-ProteinID:
XP_022098777
UniProt:
A0A8B7Z1C9
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MEDGNIEKGVIDEGRDNAASSMEDTANKDSASSDLGSTSSNDDAQDKELTVDHLHHGGDD
AGGVEKTAEGSSLSVKEEEGSISDTCVVSEAGGDVAMVTGMMTNDNGVNKTEEWTPNVPR
ADPKDGSTKESSRDQESESVPDNRGDQTQSKSDDASVDVDSGKVSEMPQASQEKENVVQS
PVEAVKTEKISAEETDTTEEVDVSNHNHLNSCESVKGRSDGVEMPTDELNKKSAEVTESK
KPVVIFPNPEPDAKVVEKNPGVATSPKAANQMDGANANNNAKGQSSGSNRDNKTSAGDTK
SAALINTKSVEKNSSKPDAPPPEIRERAGKSYSAQRSANRGSRKSGVPDPKSQDKQSTPR
PTEGDAKMESRGRASQEEAVKAKGKQASNQGREKTASGGNRPKEPDRESEKKHSDHRRRD
RDGTRDGKRTGEAIPAVKKPIKTKEEIEREEAEQKKKAEELKRAEEEKKAAEMKKQEEEE
QRLLEEENTRLAEEEQKHAVEISTEANERKQAKMALRAKNLAAAAERPDEDFFVKLDSSM
KKNTAFVRKLKTMTEQQRDSLTSEFNGLNLTKYVGEVATAIVESKFKMADISCTVHICSL
MHQRYAEFSAQLQLAIQKCHPAQAKKDDPKESKKEPVVFDSRIRVELRFLAELIVAGVFT
EKEGLPPLNNLLSSVLKADKESHAHISIIISFLKHCGEDFAGLVPRRNRLLAEKFNLTLP
SSEIFSAQRKGAYKSLLKDHYLSLTKHLLKEHRDLQNVERHNRRTLQTKGELSEERRKRY
EEMQASYQKLLVNTSTYADLIDEVVPDLPEAEITQEERDMMALDYLGSDKSGAEFDFDTS
LWEDEDTRTFHENLIDLRTMVPGILFKDSEKKASPDEKQEDLDKLGEDIVALEKTEGAEI
VSKEEAEAAEMAPREEPEGATTEEDISVEDVETTSALEPEQEDTEEEEEEAEQVTNMSKK
MLLDAYLQRLPQCVNRDFIDKAAIEFCMDLNTKINRRKLIKTLFNVPRTRLDLLPFYSRL
VATLYPCMPDIGTELVEKLKADFRWHVRKKDQMMIETKIKTVRFIGELTKFKICSKSDTL
QCVKFLLQDFRHHNIDMVCNLLDSCGRFLYRSSDSHLLTKALLELMMRKRSKLHLNERHS
TMVENTFFYCNPPEVKQVEKKERPVIHQYIRKLIFRDLSKTTTEKILKQLRKMDWTNVEI
KTYITKCLGNVWNVKFNNIHCVASLLAGLVPYHDDVGIQVVDAVLEDIRIGMEINHAKFN
QRRVSTVKFLGELYNYRMVESAVIFKTLYSLIRFGITLDGAENPLDPPEHLFRLRLVCTL
LDTCGQFFDRGTSKKKLDCFLVYFQQYIMYKRSLPIWNPLVHPFPLDTDNALADTLETLR
PKLKICTTLEEANEAVAELEKEQVQKHGGVIQMAIASVNPQPHGSPQLGTITEGDETKAT
AAVEFTSITEDEEISDSDSELEGVTRRGSEGGGEGHTSNSQSQGHSQNTGDEEVADDQMA
LDSAGETEEEDTVTVLTGGPKLIKCEEDDDFTAEFDKMLSESVQQRTVDTIKVPQQEIAI
PAQARPRPKKIIFDIFNPDNNEDDNEAEQQADSVNFVLMMRRGNKQHYHEFEVPKSSDLA
ANLRNRERLELAEKQRLKELTLTINDRQEEEDYQEMMAQFQKPATVVTPMTPKERKPKFH
HPKGAPDADQIFNSSGNRKW
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggaggatggaaacattgaaaagggtgtcattgatgaaggcagagataacgctgcctca
tccatggaggatacagcaaacaaggacagtgcatcctctgacttgggaagcacatcttca
aatgatgatgctcaggataaagaactgacagttgaccacctccatcatggaggggatgat
gcaggaggagttgaaaagacagctgagggctcatcacttagtgttaaagaggaggaagga
agcatttcagatacctgtgtagtcagtgaggcaggaggagatgttgccatggtgacagga
atgatgacaaatgacaatggagtcaacaagacagaagaatggactcccaatgtacctaga
gcagatcccaaggatggtagcaccaaagagtcttcacgagaccaagagagtgaatcggtg
cctgacaacagaggagatcagacacagtctaagagtgatgatgcctcagttgatgtcgac
tcgggaaaagtttcagaaatgcctcaagcatcccaagaaaaggaaaatgttgttcagtca
cctgttgaagcagtaaagacagaaaagatctcagcagaggagactgatacaactgaagag
gtggatgtctcaaaccacaaccatctgaattcctgtgaatctgtcaaaggtaggagtgat
ggtgttgaaatgccaacggatgaattgaacaagaaaagtgcagaagtgacagagtcaaag
aaacctgttgtaattttccctaaccctgaacctgatgcgaaagtggttgagaaaaatcca
ggggtggcaacatcaccgaaggcagccaatcaaatggatggagcaaatgccaacaacaat
gccaaaggtcagagttcagggtcaaacagagacaacaaaacgtcagcaggggataccaag
tctgctgctttgattaacaccaagagtgttgaaaaaaacagttcaaaaccagacgcaccc
ccacctgaaataagggagcgggctggtaagtcgtactctgctcagagatcagctaaccgt
ggcagtcgcaagagcggagtgccagatcccaagtcccaggacaagcagagcacaccgaga
ccgactgagggtgatgccaagatggagtccagagggagagccagccaggaggaggccgtg
aaggccaagggaaagcaggcctccaatcaaggcagggagaagactgccagtggggggaac
cggcccaaggaaccggaccgagagagcgagaagaaacacagtgatcatcgaaggagagac
agggatgggacgagagatggcaaaagaacaggggaggcaatcccggcagtcaagaagccg
atcaagaccaaagaggagattgagcgggaagaggcggagcagaagaagaaagcggaagag
ttgaagagagctgaggaggagaagaaggccgccgagatgaagaagcaagaagaggaagaa
cagcgtcttttagaggaggagaacacaaggctggctgaggaggagcaaaagcatgcggta
gagatttccaccgaggctaatgaacgtaaacaggccaagatggcactccgagccaagaac
ctcgctgctgcagctgaacgtcccgatgaggatttcttcgtcaaacttgactccagtatg
aaaaagaacacagcatttgtcagaaagttgaaaacgatgaccgagcagcagcgggactcg
ctgacgtcagaattcaacggcctaaacctgacaaagtacgtgggcgaggttgccacggcg
atcgtggagtccaagttcaagatggccgacattagctgcaccgtgcacatctgctccctg
atgcaccagcggtacgcggagttctccgcccagctgcagctggccatacaaaagtgccat
ccggcgcaggccaagaaggacgacccgaaggagagcaagaaggaaccggttgtttttgac
agcagaattagagtggagttgagattccttgctgagttgattgtggctggagtgttcacg
gagaaggagggcctaccgcccctgaacaacctgctgtcctcggtcctgaaggcggacaag
gaaagccacgcccacatctccatcatcatcagcttcctgaagcactgcggggaggacttc
gccgggctggtgccccgcagaaacaggctcttggcagagaagttcaatctgaccctcccc
tccagcgagatcttttctgcccagcggaagggcgcctacaagtctctcctgaaagaccac
tacctgtcgctgaccaagcacctgctgaaggaacacagggacctgcagaacgtagagaga
cacaaccgacgcacgcttcagaccaaaggagaactgagcgaagagagaaggaagcgatat
gaggagatgcaggcctcctatcagaaactgctagtcaatacctccacctacgcagatctt
atcgacgaggttgtaccagatctaccagaagcagaaataacacaagaggagcgtgacatg
atggcgctggattacctcggcagcgataaatcgggggcggagtttgactttgacacgtct
ctgtgggaggacgaagacacaagaacgttccacgagaacttgattgacctgcgtacaatg
gtcccagggattctgttcaaagatagtgaaaagaaggcatcgcctgacgagaaacaggaa
gatctggacaaacttggagaagatatcgtagcccttgagaagacggaaggggcagagatt
gtatcaaaggaggaggcggaagcggctgagatggcaccgagggaggagccagagggcgct
accacagaggaagacatttcagtggaggatgtggagaccacctcagccttggagcctgaa
caggaagatactgaagaggaggaggaagaggcagagcaagtgaccaacatgagcaagaag
atgctcctggatgcctacctacagcgcctccctcagtgtgtcaacagggacttcatcgac
aaggctgccattgagttctgcatggacctgaacaccaagattaaccgccgtaagctcatc
aagactctcttcaatgtacccagaaccagattggacctgttgcctttctactctcgcctt
gtggccactctctatccttgcatgcctgacattggcacagaacttgtggagaaactcaag
gctgacttcagatggcatgtgaggaaaaaagaccaaatgatgattgagacaaaaatcaaa
actgttcggtttatcggggagctgactaaattcaagatttgctccaagtcagacacattg
cagtgtgttaagttcctgctgcaagacttccggcatcacaacattgacatggtatgcaac
ctgctggacagctgcgggcggttcctgtaccggtcctcggactcccatctcctgaccaag
gcactgctggaactgatgatgcgcaagagaagcaaactgcatcttaacgaacgccacagc
accatggtggagaacactttcttctactgcaaccctccggaggtcaaacaggttgagaag
aaagagcggccggtgattcaccagtacatacgcaagcttatcttccgagacctgtccaag
accaccactgagaaaatcctgaagcaactccggaaaatggactggactaatgtggagatc
aagacctacatcactaaatgcctgggcaacgtgtggaacgtcaagttcaacaacatccac
tgtgtagccagtctcctggccggtctggtaccctaccacgatgacgtgggcatacaggtt
gtggatgccgtcttggaggacatcagaatcggcatggagatcaaccatgccaagttcaac
cagcgccgtgtctccaccgtgaagttcctgggggagctgtacaactaccgcatggtggag
tcggcggtcatcttcaagaccttgtactccctgatccgatttggcatcaccctggacggt
gccgagaatcctcttgaccctccggaacacctgttccgtctgcggctggtctgtaccctg
ctggacacctgcgggcagttctttgaccggggcaccagcaagaagaagcttgattgtttc
ctggtgtacttccagcaatacatcatgtacaagcgcagtctacccatatggaacccgctg
gtccacccgttcccactggacaccgacaatgccctggccgacacgctggaaacactacgc
cccaaactgaagatctgcaccaccctggaggaggctaacgaggcagttgccgagctggag
aaggaacaggtccagaagcatggtggtgtcatacagatggcgatagcatctgtcaacccc
cagccacatggttccccgcaacttggcaccatcactgaaggcgacgagaccaaggctact
gcagccgtggaatttaccagcatcacggaggatgaggagatctccgactcggactcagaa
ttggagggcgtgactcggcgggggagcgaagggggcggagagggccacacctccaacagc
cagagccaggggcacagccagaataccggagatgaagaggtggcagatgaccagatggcc
ctggactcggcaggcgagactgaagaagaagacacggtgactgttttgacaggaggtccc
aagctcatcaagtgtgaagaggacgacgatttcacggcagagtttgacaagatgctgtca
gaaagcgtacagcaacgcacggtggacaccatcaaggtgccgcagcaggagatcgccatc
cccgcccaggcccggccccgccccaagaagatcatcttcgacatcttcaatccagacaac
aacgaggacgacaacgaggccgagcagcaggcggactcggtgaactttgtgctgatgatg
cggcgcggcaacaagcagcactaccatgagtttgaggtgcccaagtcgtcggacctagcc
gccaacctcagaaacagggagaggcttgagcttgccgagaaacaacgtctgaaggaactg
acactcaccatcaatgacagacaggaagaagaggactatcaagaaatgatggcgcagttc
cagaaaccggcgaccgtcgtgacccccatgacccccaaggagcgtaagcctaaatttcac
catcccaagggtgcccccgacgcagaccagatcttcaactcctcgggcaatcgcaagtgg
tga
DBGET
integrated database retrieval system
