Acanthaster planci (crown-of-thorns starfish): 110983742
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Entry
110983742 CDS
T05078
Name
(RefSeq) PAB-dependent poly(A)-specific ribonuclease subunit PAN3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110983742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110983742
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110983742
mRNA degradation factors
3'-5' decay
Pan complex
110983742
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
Pkinase
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
Torus
UL97
Motif
Other DBs
NCBI-GeneID:
110983742
NCBI-ProteinID:
XP_022098943
UniProt:
A0A8B7Z018
LinkDB
All DBs
Position
Unknown
AA seq
820 aa
AA seq
DB search
MNSGSTGTKKPALCRYWAAKKTCFYGNECQFMHADPNSPYGRSPTADNNSFGGGHISQDL
AAMDLADPHMAPDHFFTAPFEMDNDNFGGSTSKFQHFMQRSHSVGTGLSHYSEEGRHHED
EGRRSMFGQMSPQGASIDTKMSANFGGMKISPSNDVNSNIQGMQFYPGARNTGSIKEFTP
RANANPSTNSAEFLPNVRNADFKQGGTQANDLISKIPEFVPRSLAQPGNGMMNDTSGMRG
TNNNSATLVPHSSGGMNDHYNSGSLSAGASPHQSPGNSPSMRRKGQPPPLDISAAQANFP
GAMVQENIGGTTYFYTEDQVHPAMPRAVYPNFHVYQSMPAHVAYMKPKPNAPSFFVGEEL
KIDIYNRQAVSMAQVDPTENPDIPQEVDKYHTLFPLEPPPKSPMEKSSTFGYTTTCYKAI
NKKDNKLYCLRRIHGFRMTNTQWMVLVDKWKKLQHSNIVTLREVFSTKAFGEHSTVFVHD
FHPTALTLMNRHFTGPGAHASNGFSGGGNAFGKGQHPKGGFMDHQGPHHTGMNGPQQRTG
LLPESLIWTYIVQLSSALRTIHAAGLACRVMDPTKILVTGKSRLRVNCVGIFDVLTFDGG
NNPLAMISHYQQEDLVSLGKVVLVLACNSVQSIQRQHIPASLDLVAHNFSSDLKNLILYL
LTTQPRPRSVNDIMPMIGARFYTQLDAAQMRGDVLEEEVAKEVVNGRHFRLLCKLGVMNE
RPEFNGDPTWSETGDRYLLKLYRDYLFHQVTSDSTPWIDMAHIVQSLNKLDAGVPEKVTL
MSRDEQNILVVSYTDLKRCFETTFEEIQQSQSAPIEEVPQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtggctccacagggaccaaaaagcctgcgttgtgtcgttactgggcggccaaa
aagacttgtttttacgggaatgaatgtcagtttatgcacgctgaccccaattcgccctac
ggtcggtcgcccactgcagacaacaactcattcggtggggggcacatcagtcaagacctt
gcagccatggaccttgccgatccacacatggcacctgaccatttcttcacggctccattt
gaaatggacaatgacaactttggaggatccacaagcaagttccagcatttcatgcagagg
tctcattcagtgggcactggcttgtctcactactctgaggaaggtcgacaccatgaggat
gagggacggagatccatgtttggccaaatgtccccgcaaggtgccagtattgacaccaag
atgtcagccaattttggtgggatgaaaatatcaccttccaatgatgtgaactctaacatc
cagggcatgcagttttatcccggtgcccgcaatacgggcagcatcaaggagttcacccct
cgcgccaatgccaatccaagcaccaactcagccgagttcctgcccaatgttcggaatgct
gacttcaagcagggcggtacccaagccaacgatcttatctctaagatcccagaatttgtg
ccaaggtccctagcccagccgggcaatggaatgatgaatgataccagtgggatgaggggg
acaaataacaactcagcaacactggtgccccatagctctggtggcatgaatgaccactac
aattcaggttccctttcagctggtgcctcacctcatcaatcccccggcaactctccatcc
atgagaaggaaaggtcagccccctcccctggacatcagcgcagctcaggctaacttcccc
ggtgccatggtgcaggagaacattggtggcaccacatacttctacacagaggaccaggtc
catcctgccatgccaagagctgtgtatcccaacttccatgtctaccagtccatgcctgcc
cacgtggcttacatgaagcccaaacccaatgctccatcattcttcgttggcgaggaattg
aagatagatatatacaacaggcaggcagtgtctatggcacaggtggacccaactgagaac
ccagacattccacaggaagtagacaagtatcacactctgttcccactggaaccgccccct
aagagccccatggagaaatcaagtacttttggctacaccaccacgtgctacaaagccatc
aacaaaaaggacaataagctctactgcctccggagaatacacggtttcagaatgaccaac
acacaatggatggtccttgttgacaagtggaagaaactgcagcattccaacatcgtcact
ctgcgtgaagtcttcagcactaaagcctttggagaacattccacggtgtttgtccatgat
tttcaccccactgccttgacactgatgaacagacacttcacaggcccaggagctcatgcc
agtaatggctttagtgggggagggaatgcctttggtaaggggcagcaccccaagggtggc
ttcatggaccatcagggcccacaccatacaggtatgaatggtccccagcaacgcactggt
ctcctgccagagagtctgatctggacgtacatcgtccagctgtcctcggccctgcgtacc
atccatgctgctggcttggcctgccgtgtgatggaccccactaagattttggtcactggc
aaatccagattacgtgtcaactgcgtcggcatctttgacgtcttgacctttgatggtggc
aacaaccctttggctatgatatctcactaccagcaagaggacctagtatctcttggtaag
gtggtgctagtgttggcctgtaactcagtgcagagcatccagagacagcacataccagct
tccttggatctggtcgctcacaacttctccagcgatctcaagaatctcatcctgtatctt
ttgactactcagcccaggcctcggtccgtcaatgacatcatgcccatgattggggccagg
ttctacacccagttggacgctgcacagatgcgaggggatgtgctggaggaagaggttgcc
aaggaggtggtcaatgggcgacacttccgccttctgtgcaagctgggggtcatgaatgag
aggcccgagtttaatggtgatcccacttggtcagagactggcgaccgttacctgttgaag
ctgtacagggattacctcttccaccaagtcacatctgatagcacaccttggattgacatg
gcacatatcgtgcagtcactgaacaagttggatgctggggtgccagagaaagtgacactg
atgtcacgtgatgagcagaacatcctagtggtgtcgtacaccgacctgaaacgctgcttc
gagaccacctttgaggagattcagcaaagtcagagtgctcccattgaggaggtgccgcag
tag
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integrated database retrieval system
