Acanthaster planci (crown-of-thorns starfish): 110984024
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Entry
110984024 CDS
T05078
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110984024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110984024
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110984024
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
110984024
RNA polymerase I system
110984024
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
110984024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
KOW
Spt5-NGN
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
S1CSD-TOTE-1
Arabino_trans_N
Motif
Other DBs
NCBI-GeneID:
110984024
NCBI-ProteinID:
XP_022099501
UniProt:
A0A8B7Z3H4
LinkDB
All DBs
Position
Unknown
AA seq
1096 aa
AA seq
DB search
MSDSDASAFSDVESEGSYQAKSDVEDESPVASEAEEAPSDEGSEVGSMAAGGNEEEEEEE
EEGLDLTLPDDEEEDEMYDSEEDDTMTKRKKARFREFILDEADVDNDYEDDEEGDWEEGA
KDLIDKTSRVEQDESERHGARRLQQLLSHQKEDEIEEYYKRKYAETSSRSRYADEDELPD
QITQQGLLPGVKDPNLWMVRCKIGEEKATAMQLMRKFIAYQYQDEPLQIKSVVAVEGLKG
YIYVESFKQTHVKHAIQGVGNLRMGQWNQLMVPIKEMTDVLKVVKEIVALKPKSWVRLKR
GVFKDDLAQVDYVEPSQNQVTLKLLPRIDYTRMRGVMRTANPDKRKKKRRPMQKLFDEEA
IRAISGEVSKDGDFLIFEGNRYSRKGFLYKTFAMSAIVAEGIKPTLTELERFEDRPEGID
VQLVAETKSSQEQAHSFAPGDNVEVIEGELIHLQGKVITVEGNTISVLPTHEDLKDILEF
PASELRKHFKIGDHVKVIAGRYEGDTGLVVRVEENMAVLFSDLTMHEMKVLPKDMQLCQE
MSSGVDSLGQFQLGDLVQLDLQTVGVIVRLEKETFQVLNMNNKLVHVKAAAITRKKDSRN
AIALDAEQNNIQVKDIVKVIDGPHSGRQGEIKHIYRSFAFLHSRLMTENGGIFVCRTRHI
VLAGGSRQMDSGFGIGYTPMSPRISSPAHPSSGGMGNAPMGRGRGRIGRDMEMIGQTVRI
SQGPYKGHIGIVKDATESTARVELHAMFRTISVDKNRLNRVGGQIRTGATTAYGRTPMYG
SQTPMYGSGSKTPVYGSQTPLHDGSRTPHYGSQTPLHDGSQTPGRSGAWDPNITNTPSRS
SDYDFSYDEASPSPQPYGATPNPATPGYGSETPPSNGPYTPATPGSSSGMYGSESTYSPY
QPTPSPGNYQPTPSPSSASFQQAPSPGSYQPTPSPSSYQPTPSPGGSYQATPSPVGFPMT
PGAPSPLGFNPQTPGGGMMGLEGGTAYEWQTTDIEVTIVSHEDQALVKKTGVIRSISGRM
CSVYLPDEERVVNVESVHLEPVTPAKMDRVKVIDGDDRDQTGVLISIDNDDGIVKMDGPS
DFKILNLRVLAKLHKD
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagtgacgccagcgcattttcagatgtggagagtgagggcagttatcaggca
aaaagtgacgtagaggatgagagcccggttgccagtgaggcagaggaagcccccagcgat
gagggaagcgaggtggggagcatggccgctgggggcaacgaagaagaggaggaggaggaa
gaggaagggttggacctgaccttgccggatgacgaggaagaagacgagatgtacgactcg
gaggaggatgacaccatgaccaagcgcaagaaggctcgcttccgggagttcatcctggat
gaggccgatgtggataacgactatgaggatgacgaggaaggcgattgggaggagggggcc
aaggacctcatcgataagaccagccgggtggagcaagacgagtctgagaggcacggtgct
aggaggctgcaacaacttctcagccaccagaaggaagatgagatcgaggagtactacaag
aggaagtacgcggagacatcgtcacggagtcgctatgccgacgaagatgagctgccagac
cagatcacgcagcagggactcttgcctggcgtcaaggatcccaacctgtggatggtcagg
tgtaagattggtgaggagaaagccacagccatgcagttgatgagaaaattcatcgcttac
cagtaccaggacgagccccttcagatcaagtcagtggtggccgtggagggcctgaagggt
tacatctacgtggagtccttcaagcagacccacgtcaagcatgccatccagggggtgggc
aacctgcggatgggccagtggaaccagctgatggtgcccatcaaggagatgaccgacgtg
ctcaaggtggtcaaggagatcgtggccctcaaacccaagtcctgggtccggctcaagcga
ggtgtcttcaaggatgacctggcgcaggtcgactacgtggagccgtcccagaaccaggtc
accctcaagctgctgccccgcatcgactacactcgcatgcggggcgtgatgcgcaccgcc
aaccccgacaagaggaagaagaagcgaaggcccatgcagaagctgtttgacgaggaggcc
atcagagcaatcagtggtgaggtttccaaggatggtgacttcttgatctttgagggcaac
cgttacagccgcaagggattcctctacaagacctttgccatgagcgctatcgtagctgag
ggcatcaagcccaccctcactgagctggagcgttttgaagaccggcctgaaggaatcgac
gtacagctggtggcagagaccaaaagcagccaggagcaagctcacagcttcgcccccggt
gacaacgtggaggtcatcgagggagagttgattcacctgcaggggaaggtcatcactgtg
gaggggaacaccatatcggtcctgcctacgcatgaagatctcaaggacatcttggaattc
ccagccagcgagctcaggaaacacttcaagattggtgatcacgtcaaggtcatcgccggc
cgctacgagggcgacaccggtctggtggtgcgagtggaagagaatatggccgtgctgttc
tctgatctgaccatgcatgagatgaaagtgctgcccaaggacatgcagctgtgccaggag
atgagctccggcgtggactccctgggtcagttccagctgggagatctggtgcagctcgat
ctccagacagtgggtgtcattgtgcggctggagaaggagacattccaagtgctcaatatg
aacaacaagttggtccacgtcaaagcggcagccattaccagaaagaaagattcccgcaac
gccatcgcattggatgctgaacagaacaacatacaagtcaaggatatcgtcaaagtcatc
gacggaccacactcgggtcgtcagggtgagattaagcatatctatcggagctttgcattc
ctgcactctcgcttgatgacggagaacggcgggatctttgtctgtcggacaagacacatc
gtcttggctggtggctccaggcaaatggattcaggatttggcattggatacaccccaatg
tctcccagaatatccagccctgcccaccccagcagcggtggtatgggcaacgcaccgatg
ggcaggggacgaggccgaattggtcgagacatggagatgattggtcagacagtccggata
tcacagggaccatacaaaggtcacatcggtattgtgaaggacgctacggaatccacagcc
agggtggagctacatgccatgttcagaacaatcagcgttgacaaaaacagattgaacaga
gttggtgggcagatcagaactggcgcaacgacggcttatggtcgcacacccatgtatggt
tcccagactcccatgtacggctctggatccaagacaccagtctatggctcgcagacacct
ctccatgatggaagtagaacgccccactacggctcacagaccccgttgcatgatgggagt
cagacgccaggaagatctggagcctgggaccccaacatcaccaacacgcccagcaggtcc
agtgattacgacttcagctatgacgaggcgtccccctcccctcagccgtacggtgccaca
cccaaccctgccacccctggttatggatcggagaccccgcccagcaatggcccttacacc
ccggccactcccggtagctcgtctgggatgtacggcagcgaatccacctactcgccctat
cagccaactccatctcctggcaactaccaacctactcccagcccctcctctgcctccttc
cagcaagcccctagccctggcagctaccagcccaccccgtctccctctagctaccagccc
acgccttccccaggaggcagctaccaggccacccccagccccgtgggcttccccatgaca
cccggagccccctccccactgggcttcaacccccagacccccggcggagggatgatgggc
ctggagggggggaccgcctacgagtggcagaccacggacatcgaggtgaccatcgtgtcg
cacgaggatcaggccttggtcaaaaagacgggggtcatccgcagcatctcgggaaggatg
tgttctgtctacctgcctgacgaggagcgtgtggtcaacgttgagagcgtccacctcgag
ccagtcactccagcaaagatggacagagtaaaagtcatcgacggtgacgatcgtgaccag
accggcgtactgatcagcatcgacaatgacgatggcatcgtcaagatggacggaccatcc
gacttcaagatcctcaaccttcgagtactggccaagctgcacaaagactaa
DBGET
integrated database retrieval system
