Acanthaster planci (crown-of-thorns starfish): 110984137
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Entry
110984137 CDS
T05078
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110984137
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110984137
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
110984137
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
Rrp44_CSD1
OB_HELZ2
Rrp44_S1
CSD2
Motif
Other DBs
NCBI-GeneID:
110984137
NCBI-ProteinID:
XP_022099658
UniProt:
A0A8B7Z220
LinkDB
All DBs
Position
Unknown
AA seq
1088 aa
AA seq
DB search
MCGPCARSLTLLVSLDGNSGKFPVKQGRVLQLCTFRHRMLKTDKVVQVKTRQGRALRLVR
EQYLREDVPCNSELCLAGCRKTGSSTTPADVTHYIVPDCHVTGEFLEIFELPELTGIIFM
QTVLHHVLYEKGHRFYRRIRAKVKDSRNHCTIFANEFCRYAYNPRQAGESQNDWLVRAVY
DSAVWYYNHLAGQKPIVFLTQGEDAVVKYGSETVGVHVMNIQKYLEVFWPDLTQAHDIYE
SLAASLADSRENKKGSSKEYTDYLPSDVLAAGIKSGLYIEGTLRVNKYHAEKEAFVARGS
GSKGINLDSDILISGRKNRNRAIHGDQVAVELLPRSQWVGQINSLSSTDDPEDASDTDQS
NVKPTGRIVGVLQRHWRDYVASFPDKQQGQGSGAGKVLVIPWDQRFPKIRISTRQAEALR
DHRIIVRLDSWEMASLYPSGHFVRSLGPIGSLETEIAAILVENRISVGAFTEAQLKELPT
NSEDNPWMMTDEEIKQRRDLRETHLIFSVDPKGCEDVDDTLSVRELKNGKVLELGVHIAD
VSHFVQPNSLTDLEAKQRSATVYLADRCYNMLPSILSADLCSLIGGVDRYAVSVMWQLDP
QTYEVRQVWYGRTVIRSSHKMFYEAAQALHDGKDVRQDIPELAGMNEDEVETRLSELRWC
IDKLMDIARTLKARRVVGGAVQLERVEVKVELNEEQEIEDLIPKQAMEIHETIAECMIFA
NHWVAKKISETFPNFALLRRHPLPRQDQFHYLIDSAKVKGFTIDTSSNKALADSLGKCVD
LKDPICNKILRSLAIKAMSKALYFSTGSLPMDQFFHYGLALDRYTHFTSPIRRHADIIVH
RLLIAAISKDHDGGQGLPGNSELEELCGHINDRHRDSQLAQQDSQALFQVLFFKDRDPTT
DECCTVDAVIHGLRANGFLIFIPRYEIKGAISLKDREGRVCDLSEDGRPSWTAGSLTRTS
YGITVTTATSQSTFKLFDHVTVRISVLSSRSHGWSLQFELISNRPHLASQLTEQGQGLRT
DIIKEVTGASKKQRETSLSSLDEDVDVMGRSLAQLRLEYGQTDSAKSQYHLLQEFVEMGL
QESYSELG
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggtccttgtgcgcggtctctaacgttactcgttagtcttgacggaaattcaggt
aaatttcctgtaaaacaaggcagagttttacagctttgtacattccgtcataggatgttg
aagacagacaaggtggtgcaagtgaagacaaggcaggggcgggctttacggctggtcagg
gagcagtacttgagggaggatgtaccctgcaatagtgagctctgcctggcagggtgcaga
aaaactgggagttcgaccacaccagccgacgtgacccattatattgttcccgactgtcat
gtgactggcgagttcctagaaatatttgagctgcctgagttgacaggaatcatcttcatg
caaacggtgcttcaccatgtgttgtatgagaaaggccatcgcttttaccgacggataaga
gccaaggttaaggacagccggaaccactgcaccatctttgccaacgagttttgccgctat
gcctacaaccccaggcaggcaggcgaaagtcaaaacgactggctcgtcagggctgtatat
gacagcgctgtgtggtactacaaccatctggccggacagaaaccgatcgtttttctgact
caaggtgaagatgccgtggtcaaatatggaagtgagaccgttggtgtccatgtcatgaat
attcagaagtacttggaggtcttctggcccgatctcacccaggcccacgacatctatgag
tcactggccgcatcgttggctgacagcagggaaaacaagaaaggaagttctaaggagtac
acggattacctaccaagcgatgtcctagccgctgggatcaagtctggattgtacatagag
ggaactttgagggtcaacaaataccacgcagagaaggaggcctttgtcgcccgaggaagc
ggaagcaaaggtatcaacttggactcggacatcttgatatccggaaggaagaacaggaat
cgtgccatacatggtgaccaagttgccgtcgagctgctgcccagatcacagtgggtgggt
caaatcaactccctatcttcaactgatgatccagaagatgcgtcagacacagaccagagc
aacgtcaaacccaccggtcgaatcgtcggcgtgctgcagaggcattggagggactacgtg
gcgtccttcccagacaaacaacagggccagggttcgggagcagggaaggtccttgtcatt
ccctgggatcagcgcttcccaaagatacgcatcagcaccagacaagcggaagcactacga
gatcacaggatcattgtacgacttgactcgtgggagatggcctcactgtatcccagtggt
cactttgtgcggtcactcggaccaattggcagccttgagacggagattgccgccatcttg
gtagagaaccgcatctctgtcggggcgttcacagaggcacagttgaaagagttacctacc
aattctgaggacaacccctggatgatgacggatgaggaaattaagcagagacgagacctc
cgggagactcatctgatcttcagcgtcgatccaaaaggctgtgaagacgtcgacgatact
ttgtctgtaagggaactaaagaacggtaaagttctggaacttggagttcacattgccgat
gtctcacactttgtccagcccaactcgctcacggatcttgaggccaagcagagatcagcg
acagtgtacctggccgaccgatgttacaacatgctgccctctatcctgagtgccgacctc
tgctctctgattggcggagtggaccgctacgccgtgagcgtaatgtggcagctggacccc
caaacctacgaagtccgccaagtctggtacgggcgtaccgtcatccgctcctcccacaag
atgttctacgaggctgcacaagcattgcatgatgggaaagatgtgaggcaggacatacca
gaattggcaggaatgaacgaggacgaagtggagacacgtttgtcagaattgcgctggtgc
atcgacaagctaatggacatcgccagaaccctgaaggcgcggagggtggtgggtggggca
gtgcagttggaaagggtggaagtcaaagttgagctgaacgaggagcaagaaattgaggat
ctcattcccaaacaggctatggagatccatgagaccattgcggagtgcatgatctttgcc
aatcactgggtcgccaagaagatatcggagacgttcccaaactttgcactgctgaggcgt
cacccattgcctaggcaggaccagttccattatctcatcgacagcgccaaggtgaagggc
ttcaccatcgacaccagttccaacaaggcccttgcagattcgcttggcaagtgcgttgac
ctcaaggatcccatctgcaacaagattctgcgttccctggcgatcaaggccatgtccaaa
gcactgtacttctcaaccggtagcctgccaatggatcagttcttccattacggtctggct
ctggacagatacacacatttcacatcaccaatcagaagacatgctgatattatcgtgcat
cgtctgttgatagccgccatttcaaaggatcacgatggtgggcaagggcttcctggcaac
agcgaacttgaggagttgtgcggtcacattaatgacagacacagggattcccagctcgcc
cagcaggactctcaggctctattccaagtgttgttcttcaaggacagggacccgacaaca
gacgagtgctgcacagtggatgctgttatccacggtctgagagccaacggttttctcatc
ttcatcccaaggtatgaaataaaaggagcaatttcgctgaaagacagagaaggtcgagtg
tgcgacctctcagaagacggcaggccatcgtggacagcaggctcattgacaagaacttct
tatgggatcaccgtgacaacagccaccagccaatcaacattcaagctctttgatcatgtg
acagttcgtatctcggtgctgtcctcgagatcccacggatggtctcttcagtttgagctg
atttccaaccgtccgcatctagccagccagctgaccgaacaaggccaaggactgcgtacg
gacatcataaaggaggtcactggtgcatctaagaagcagcgtgagacatcgttgagtagc
ctagatgaggacgtggacgtcatgggtcgtagcttagctcagctcaggctggagtatggt
cagacagacagtgccaagagccagtaccacctgctgcaagagtttgtcgagatgggccta
caggagagttacagtgagctgggctga
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