KEGG   Acanthaster planci (crown-of-thorns starfish): 110984200
Entry
110984200         CDS       T05078                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018  RNA degradation
aplc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110984200
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110984200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aplc03019]
    110984200
   03041 Spliceosome [BR:aplc03041]
    110984200
Messenger RNA biogenesis [BR:aplc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110984200
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110984200
Spliceosome [BR:aplc03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110984200
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 110984200
NCBI-ProteinID: XP_022099828
UniProt: A0A8B7Z2I4
LinkDB
Position
Unknown
AA seq 130 aa
MCLLSLRNAPPVLHVFFTQAHVHVFSDDMAQQEKKKKESILDLSKYIDKPTRVKFQGGRE
VTGILKGFDPLLNLVLDGTTEFQRDPDDPYKITEDTRDLGLVVCRGTSLVLICPEDGMEQ
IANPFLQQEG
NT seq 393 nt   +upstreamnt  +downstreamnt
atgtgtcttctcagcctccgtaatgctccccctgtattgcatgtattctttactcaagcg
cacgtgcatgtcttttcggacgatatggcgcaacaagaaaagaagaagaaggagagcatc
ttggatttatccaagtacattgacaagcccaccagggtaaaattccaaggcggaagggaa
gtgactggaattctcaagggatttgacccacttctgaatcttgtgctggatgggacaact
gagtttcagagagacccagatgatccctacaaaatcacagaggacaccagggaccttggc
ctggtggtctgtagggggacatcgttggttctcatttgccccgaggatggcatggagcag
atagcaaaccctttcttgcagcaggaaggctga

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