Acanthaster planci (crown-of-thorns starfish): 110984718
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Entry
110984718 CDS
T05078
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110984718
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
110984718
Spliceosome [BR:
aplc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110984718
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
HA2_C
Helicase_C
OB_NTP_bind
R3H
DEAD
Ank_2
HA2_N
Ank
Ank_4
AAA_19
AAA_22
Ank_5
Ank_3
nSTAND3
AAA_11
ATPase
AAA_7
Motif
Other DBs
NCBI-GeneID:
110984718
NCBI-ProteinID:
XP_022100852
UniProt:
A0A8B7Z7B0
LinkDB
All DBs
Position
Unknown
AA seq
1553 aa
AA seq
DB search
MPKKKKENEESSKEVGEEVKIAVSIAVKEFRHDEGKKELEFPSSLSNAERKYIHLLAQSV
GLKSKSKGKGASRYLTLYKKENTKQGSVTTFDLTRDSRNESHGLLQRFPVTQKEKQELQP
RMERRVFGVTGGQARDIPKTTGRLNNGIPQIPPRRAPSDLDVFRQTLPVYQMRDEILQMM
NRHRVSMICGETGSGKTTQVPQFILDECCQKKHSCRILCTQPRRLSALSIAERVATERGE
SIGQTVGYQIRLESRVSPKTLLTFCTNGVLLRTLMSGDNALQSVTHVIVDEVHERDRFCD
FLLIQLREILVKQKHLRIILMSAALDTELFIRYFNNCPLLSVPGKIFDVEELFLEDALKC
TGYTNDKMKKFMRDKAKLAKQTVELNEWYKERSATSVASTEQDDVVSKLSEELAAVSGLS
RANSDKALLDASVDVADMPEWLIKAMDSALSDCWLKGKDESFDQLMHLILNENVSVDYTH
SETSVTPLMLAAGRGKVEAVERLLSLGANPTHRASNDMTPVDWATKFNQADVVEILQAHI
TNMQVEVDDESHLIKDSVDISDEDKELLQAYHHSFDDERVDLNLIVSLLTYISEKSEEGA
VLVFLPGYDDIVALRDILLNDEAKFADSNHYQVYTLHSSMQSSDQKKVFRKPASGVRKIV
LSTNIAETSVTINDVVFVLDSGKVKEKSFDALTSVSMLKSNWISKASAKQRKGRAGRCRP
GMCFHLMSRIRYKSLPDFQTPEILRLPLQELCLHTKLLAPINISVAEFLSKAPDPPAPLI
VKNAVQLLKAIDAIDNWEDMTELGHHLADLPVEPRLGKMVLYSIVLKCLDPVLTIVCALA
YRDPFLLPNHPSQKRAAMAVRKKYAATTFSDHMALLRAFQAWQRARSDGWEKAFCQRNFL
SQATMEMIVGMRTQLLGQLRASGFVRARGPGDIRDLNTNSENWAVVKASLCAGMYPNIMK
VDRKKSQLMTQTESKIRFHPNSVMHDTGNGQSTMHQAHVGIIRSLPTDWLIYEEMTRFQH
HTSVRCATVISPLAVALFCGPSRLLPDALFQPDDNISNGTNQDESESDPEDEDRGQRAGL
KLDDWIVLKADTEAANLALHLRQKWHTLFLRRMRMPAKPWAPGDEAVLRTIVKVLSNEEQ
SLGLQQPVGIGQRPKPMAMDHFNSTPPRKSMSNRFSKQSPSTIQTATKSETASTKDLEFR
PSSGSSRQWNCASPSNQAKKPTFTKPASTLNASAPPFQGKAVYYHNSGVSSGINPSSSGR
AYSSVSQTYRGLMANGSGNPVRFFIVKCNNAMNIDLSYSNGLWCVSPSTGQILSNAFKTS
QAIFLIFSVQGSGQFEGFGRMTSDLQYKQTIDWRDSCMRNGAEFGVQWMKRASVSFDQTR
AILNPWNDNLRVHVSRDGQELEPSVGQNLLQLWAQTTSCPGDEHLSMTCWGQEARGQRGH
HLSLDTQHGIQSHSPQIMMHGQNWHGDTRLQPLAHSSPAYNQGPAAYCKKEVGPAGDGST
DDNQSTEGTVPKGQRWSIDDGSESGITAYECEYQSPDGFYPPQVPYSQDNYQT
NT seq
4662 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaaagaagaaagaaaacgaagaatcttccaaggaggttggtgaagaagtcaag
atagctgtcagtattgctgtcaaagagttcagacatgatgaaggcaagaaagaacttgaa
ttcccttcctcactcagcaatgcagaaaggaagtacatacacctactggctcagtctgta
ggactgaaatccaaaagcaaaggtaaaggagccagtcgctacctgacattgtacaaaaag
gagaacaccaagcaaggcagtgtaacaacatttgatctgactcgcgattctcgcaatgaa
tctcatggtttacttcaacgatttccagtcactcaaaaggagaaacaggagcttcagcct
cgaatggaaagaagagtctttggtgtaacaggtggacaagccagagatatccctaagacc
acaggtagactcaataatggcattccgcagattccaccaaggagggctccctctgatcta
gatgtatttagacagaccttgccagtgtatcaaatgagagatgagatcttgcagatgatg
aacaggcacagggtatccatgatctgtggagaaacagggtctggcaagaccacacaggtc
ccacagtttattctggatgaatgttgccaaaaaaaacatagctgtcgtatactgtgcacc
cagcctcgtcgattgtcagctctgtctatagcggaaagggttgccacagagagaggtgaa
agcattggacaaacagtgggatatcagatcagattagaaagcagagtgtcacctaaaaca
ttgctgacattctgtacaaatggtgttcttctgcgtaccctcatgtctggtgataatgca
cttcagtctgttacacatgtcattgttgatgaggttcatgagagagatcgtttctgtgat
ttcctcctgattcaactgagagaaatcttagtaaaacagaagcatctacggattatcctc
atgagtgctgcccttgatacagagctcttcatacgatacttcaacaactgccctctgtta
agtgttcctggtaaaatctttgatgttgaggaactttttcttgaggatgcattgaaatgc
actggctacaccaacgacaaaatgaaaaagttcatgagagacaaggcaaagttagccaaa
cagactgttgagctgaatgaatggtacaaagaacgtagtgctaccagtgtagcatcaact
gagcaagatgatgttgttagtaaactgtctgaggagcttgctgctgtcagtgggctgagt
agggcaaacagtgacaaggcattgttggatgcctcggtagatgtagctgacatgcctgag
tggttgatcaaagccatggatagtgccctcagtgactgctggctgaagggcaaagatgag
tcatttgatcaacttatgcacctgattttaaacgagaatgtcagtgttgattacacccac
tcagagaccagtgtcacacccctgatgttggcagctgggaggggcaaagtggaagctgtg
gagaggttacttagtctgggggctaatcctactcatagggcatcaaatgacatgactcct
gtagattgggccacaaaattcaatcaggctgatgttgtggagattctccaggctcatata
accaacatgcaagtggaggttgacgatgaatcccacttgattaaagacagtgttgacatc
agtgatgaggataaagaactcctacaggcatatcatcacagctttgatgatgagcgagtt
gacttgaatcttattgtgtcattactgacatacatctcagaaaagtcagaagaaggtgca
gttcttgtgtttctaccaggctatgatgacattgttgctttgagagacattctcttaaat
gatgaggcaaagtttgcagacagtaaccattatcaagtctatacattgcactcatctatg
caaagctctgatcagaagaaagtattcaggaaacctgcttcaggggtcaggaaaatcgtg
ctatccacaaatattgcagaaacaagtgtcaccatcaatgatgttgtctttgttttggac
tcgggaaaagtcaaagagaaatcctttgatgctctaacatcagtgtcaatgttgaagagt
aattggatctcaaaagccagtgccaagcagagaaaaggaagggctggtagatgccgacct
ggtatgtgcttccatttgatgagtaggattcgttataagagtttacctgacttccagacc
cctgaaatactcaggttgcctctacaggagttgtgtcttcacaccaagttgttggcacca
atcaacataagtgttgctgaattcctatccaaagcccctgacccacctgctcctctcata
gtgaagaatgctgtgcaattgttgaaggccattgatgcaatagacaactgggaagatatg
acagagttgggtcatcacttggctgatttacctgtggaacccaggctaggcaaaatggtt
ctatactccattgtactgaagtgccttgatcctgtgttgaccattgtgtgtgctcttgcc
tacagggacccattcctgttgcctaatcacccatctcagaaacgtgctgccatggctgtt
cgtaagaagtatgcagcaactacattcagtgatcacatggcattattgagggctttccag
gcttggcagagagctcgtagtgatggctgggagaaggcattctgtcaaagaaacttcctg
tcacaggcaactatggaaatgatcgttggcatgagaacacaactcctcggtcagcttaga
gcctcagggtttgttcgtgcacgtggtccaggggatatccgtgacctcaacactaactca
gagaattgggcagttgtcaaggcatcattgtgtgcaggcatgtaccccaacatcatgaag
gtggatcgtaaaaagagccaattgatgacgcaaacagagagcaagattcgtttccatcct
aactcagtaatgcatgacactggtaatggacagtcaacaatgcaccaggcacatgtaggc
atcatcaggtcattgcctacagattggctcatctatgaagaaatgacaaggtttcagcac
catacaagtgtccgctgtgctactgtcatctcaccccttgctgtagctctcttctgtggc
ccctcccgcctgctcccagatgcactgtttcaaccagatgataacatctccaatggtaca
aatcaagatgagagtgaaagtgatcccgaggatgaagacagaggtcaaagggcggggtta
aagttagatgattggattgtgctcaaagctgacactgaggctgcaaacttggccctgcat
ctcaggcagaagtggcacactttgtttctacgtcggatgcggatgcctgccaagccatgg
gcccctggagatgaggctgtcttaagaactattgttaaagttcttagcaatgaggaacag
tcattgggactgcaacagccagtaggaattggacagaggcccaaaccaatggctatggat
catttcaatagcacaccacctcggaaaagtatgtccaaccggtttagcaaacagtcgcca
tcaacaatccagacagctacaaagtcagaaacagcatcaacaaaagatttggaattcaga
ccatcttcaggcagctcaaggcaatggaactgtgcttccccctctaaccaagccaaaaaa
ccgactttcactaagccagcttcaactctcaatgcatcagcccctccttttcagggaaaa
gcagtgtactaccataatagtggtgtcagcagtggcataaacccaagtagcagtgggaga
gcttacagttctgtctcccagacctatcgaggattgatggctaatgggtctggcaatcct
gttagattcttcattgtgaaatgcaacaatgctatgaatattgacctgtcttacagcaat
ggtttgtggtgtgtgtctcccagcacaggtcaaatcctaagcaatgcatttaagacttcc
caagccatattcctgattttctcagttcaaggcagtggtcagtttgaaggttttggcagg
atgacttctgatctgcagtacaagcagacaatagactggagagacagttgtatgaggaat
ggtgcagagtttggagtgcagtggatgaaaagagctagtgtgagttttgatcagacacgt
gccatactgaacccctggaatgacaatctgagagtacatgtcagcagagatggacaggag
ttggagccatcagtaggacaaaatcttcttcagttgtgggctcaaaccacatcctgtccg
ggagatgaacacttatcaatgacatgttggggtcaagaggctagaggtcaacgaggacat
caccttagtttagacactcagcatggcattcagtcccacagtccacaaatcatgatgcat
ggccagaattggcatggagacaccagacttcaaccacttgcacattcatcaccagcatac
aaccaggggccagcagcctactgcaaaaaagaggtgggaccagcaggtgatggttcaaca
gatgataatcagagcactgaagggacagtacccaaagggcaaagatggtcaattgatgat
ggaagcgagagtggaataacagcttatgaatgtgaatatcaatcaccagatggattctat
ccacctcaagtgccttatagtcaagacaattatcagacataa
DBGET
integrated database retrieval system
