Acanthaster planci (crown-of-thorns starfish): 110985265
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Entry
110985265 CDS
T05078
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110985265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110985265
Enzymes [BR:
aplc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
110985265
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110985265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
GEP5
Motif
Other DBs
NCBI-GeneID:
110985265
NCBI-ProteinID:
XP_022101867
UniProt:
A0A8B7ZA72
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MEVTKKNFKEVLKTLPEILQSASFIAIDGEFTGLHHDVKPLPYDTPEERYDKLRQGSMDF
LLMQFGVCAFKFEKENSRYLVYPFNFYVFPRPMINSRKPDRRFLCQSSSMDFLASFNFDF
NKVFRDGIPYLTKLQKESIKEHVKEKHALHQQESSASQSSPGFISPPAKIQVDIPPEQKE
FVEGVCKQVDDFVKNEHEHVLNLAPCNGFQRKLTFQSVKARHESGLMLASKTGEKGERYI
EVTKATEEEKKLMMEKKLQADLDEVDDAAGFSQVIDLISSTGKPVIGHNMMLDVMHAIQH
FSFSLPENLSEFKELVGCVFPKLIDTKVMAGTQPFKEHIPLTGLAELEKSLSNDPFTKPT
FVTAPGYPSYCSTNDQSHEAGYDAFITGSCFATMANYLGSFLDPPKGCVSPTCNLIEPFH
NKMCLFRVQDLPYLNLTGKDLVPPRDHVFHLTFPAEWRTHDIQHLFSVFGQVFVSWIDQT
SAFVSLANREDASRVMKTIELSPDYALKTFKEYKRAVLNATPEMPMDLAQSSTSELGHHS
NNKANTTPFSAPRGLKRPHDASEVRGEDSEVAELTGVGGKKHKPMDPNAPVFVSRSSVSP
VEVTSSGNQQTPQQDSSDKDPPTELQKDGLKDTGDAESKDSSQKGEKQKLFEEPDTW
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaagttacaaagaaaaacttcaaggaggtgttgaagacgcttcctgagattttgcag
agtgcatctttcattgccattgatggggagtttaccggcttgcatcatgatgtcaaaccc
ttgccatatgacacaccagaggagagatacgacaagctcagacagggttctatggatttt
ttgttgatgcagtttggagtgtgtgcctttaagtttgagaaagaaaactcaaggtatctt
gtgtatccatttaacttctatgttttcccgaggccaatgatcaactccagaaaaccagac
cgtagattcctttgtcagagttcaagtatggacttcttggcttcgttcaattttgacttc
aacaaagtcttcagagatgggataccgtacttgacaaagttacagaaggaatctattaag
gagcacgtcaaagagaagcatgctctccatcagcaagaatcatcagcatcacaatccagc
cctggcttcatctcaccacctgctaagatacaagtcgacatacccccagaacagaaagag
tttgttgaaggcgtttgtaagcaagttgatgactttgtgaagaatgaacatgaacacgtg
ctaaacctggcaccctgcaatggattccagagaaagttgacattccagtcagtaaaagca
agacatgaatctgggctgatgttggcttcaaaaactggtgaaaagggtgagcgttacata
gaggttaccaaggcaacagaggaagagaaaaagttgatgatggagaagaagttgcaggca
gacttggatgaggtagacgatgcagcagggttctcacaggtcattgacctcatctctagc
acaggaaaacctgtcataggtcacaacatgatgctggatgttatgcatgcaatacagcac
ttcagcttttccttgccagagaaccttagtgagttcaaagagctggtagggtgtgtcttc
cccaaactgattgatacaaaagtcatggcagggacacagccattcaaggaacatattcct
ctgacaggcttggcagaattagagaaatccctgagtaatgatcctttcacaaaacctaca
tttgtaacagcacctggttaccctagctattgctcaaccaacgaccaatcacatgaagca
ggctatgatgccttcatcactggttcctgcttcgctaccatggccaactatctgggtagc
ttcttggatcctccaaaggggtgtgtctcgccaacatgcaaccttattgaaccattccat
aacaagatgtgtctgttccgagttcaagatctaccgtacctgaatctgacaggaaaagat
ttggttccaccaagagaccatgtgtttcacctcaccttcccagctgagtggcgaacacac
gacatccagcatctctttagtgtctttggccaggtgttcgtcagctggattgatcaaacg
tcagcctttgtgtctctggccaatagagaagatgcttcaagggtgatgaagactattgaa
ctgtcaccagactatgctcttaagactttcaaagaatataagagggctgtactgaatgca
acaccagaaatgcccatggacttggcacagtctagcaccagcgagctaggacaccattct
aacaacaaggcaaacacgacaccattcagtgcaccaagaggtttgaagcggccacatgat
gcctctgaagtcagaggtgaagattcagaggttgcagaactgactggtgttggaggaaag
aagcacaaaccaatggatccaaacgccccagtctttgtttcgaggagtagtgtctctcct
gttgaagttacttcatcaggtaaccagcaaacaccccagcaggattcttcagataaagat
cctccgactgagctacagaaagatggcttgaaagacactggtgatgcggaatcaaaagac
agttcccaaaaaggagaaaaacagaagttgtttgaagaaccagatacctggtag
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