Acanthaster planci (crown-of-thorns starfish): 110985472
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Entry
110985472 CDS
T05078
Name
(RefSeq) rab5 GDP/GTP exchange factor-like isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110985472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aplc04131
]
110985472
Membrane trafficking [BR:
aplc04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
110985472
Protein recycling
Other Rab GTPase associated proteins
110985472
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
Motif
Other DBs
NCBI-GeneID:
110985472
NCBI-ProteinID:
XP_022102207
UniProt:
A0A8B7Z965
LinkDB
All DBs
Position
Unknown
AA seq
493 aa
AA seq
DB search
MSSAKKKKGFHMKESELLCKNGCGFYGNVAWQGYCSKCWREVCQKARQAQIESDALLARK
IADSERAQSLQSASSNSSETLTFDKFEEKKKQHSSTRSKAVKTFFGKTAKSGSKEMIQQQ
PVLERKHSTESQKAMGDFMEFLKMLNRPAAQDLNKQCRVFVEKIQRHTHLNIEEQSEMVQ
DFYAAMAERMKTHVAFKGKLAQGSSHEQLEGMLDNVEKVIMTRLYRTLFCPPYTDDEQKD
LAVQNRIRRLRWIMPAMLDAVIDEGNPRVRELIERAQTDLIEVNSRRAPIDKLSCIVRCS
KNIFKMISLSQDAPSSADDYLPALIYMVLKANPPQLHSNIQYITRFANPSRLMQGEAGYY
FTNVCCAISFIENLDAQSLSLSQEEYDSYMTGKAVPPGTISSEPICSGLRLMYANLTSLE
ELRGRQDRLMKSARELQAEMTAWKDSVIKQVDDVLREKPLIIRRAKVPAGLDTEISSTSQ
NLPAPLIPQVVNK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctgccaaaaagaagaaggggtttcacatgaaagagtcggagttgctctgcaag
aatggatgcggtttctatggaaacgtggcttggcaaggctactgctctaagtgttggcgt
gaagtatgccagaaagctcgacaagcacagatagagagcgatgccttactcgctcgcaag
attgccgacagtgagcgtgctcagtcactccagtcagcctcgagcaacagcagcgaaacg
ctcacctttgacaaatttgaggaaaagaagaaacagcactcttcaacgcgcagcaaagct
gtgaagactttctttggtaaaactgccaaaagtggaagtaaggagatgattcagcagcaa
ccagtcttagagcgtaagcacagcaccgagagccaaaaggccatgggtgacttcatggaa
ttcttgaagatgctgaaccgtccagcggcccaagacctcaacaagcagtgccgcgtgttt
gttgagaagatccaacgacacactcacctgaacatagaggagcaatctgagatggtgcaa
gacttctatgctgcgatggcagaaaggatgaagacccatgtagcatttaaaggtaaactt
gcacaaggttcatctcatgagcagcttgagggtatgttggataatgtggagaaggtcatc
atgacaaggttgtatcgcacgctattctgcccgccctacacagatgatgagcagaaggac
ctcgcggtgcagaatcgtatccgtcgcctgagatggatcatgccagccatgttggatgct
gtgattgatgaaggaaacccacgggtgcgagagctaattgagagggctcagacagatctt
atagaagtcaactcacgcagggcaccaatcgacaagctatcgtgcattgtccgctgcagc
aagaacatcttcaagatgatcagtttatcccaagatgctccttcaagtgccgatgactac
ttgcctgctcttatctacatggtactgaaggcaaatccaccccaactacactccaatatt
cagtacatcactaggtttgccaacccatcgcgattgatgcaaggtgaagctggatattac
ttcactaacgtgtgctgtgccatcagcttcatagagaatctagatgctcagtcactgtct
ctaagtcaagaagagtacgacagctacatgacgggcaaggccgtaccaccagggaccata
tccagcgagcctatttgtagtggactacggttgatgtacgctaacttaacctcccttgag
gagttacgaggtagacaggatcgactgatgaagagtgccagggagttacaagctgagatg
acagcttggaaggacagtgttatcaaacaggtggacgatgtcttgagggagaaacctctg
atcatcagaagagccaaggtaccagcaggattggacacagagatttccagcacatcacag
aacctaccagcgcctctgataccccaggttgtcaataaatga
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