Acanthaster planci (crown-of-thorns starfish): 110986359
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Entry
110986359 CDS
T05078
Name
(RefSeq) pre-mRNA-processing factor 19-like
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
aplc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110986359
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110986359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110986359
04121 Ubiquitin system [BR:
aplc04121
]
110986359
03400 DNA repair and recombination proteins [BR:
aplc03400
]
110986359
Enzymes [BR:
aplc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110986359
Spliceosome [BR:
aplc03041
]
Complex B
Other components
Prp19 complex
110986359
Complex C
Prp19-CDC5 complex
110986359
Ubiquitin system [BR:
aplc04121
]
Ubiquitin ligases (E3)
U-box type E3
110986359
DNA repair and recombination proteins [BR:
aplc03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
110986359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_SCAP
Beta-prop_HPS5
PEP5_VPS11_N
WDR90_beta-prop_4th
U-box
zf-Nse
Beta-prop_DCAF12
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
PAS_11
DUF7305
Pullul_strch_C
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
110986359
NCBI-ProteinID:
XP_022103864
UniProt:
A0A8B7ZDY1
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MALVCSICHEVPEHPVLSTVSNHVFERRLIEKFIAENGVDPINGEVLSEDQLVDIKVSPL
VKPRPPTATSIPAILKLLQDEWDACMLHSFTLRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAAPGMVPAQIAALPAGAAQGVVRHEPMEAAEPGPAAMTEDIIQ
KLQEKANLLTAERKRRGKKVPDELMPPDDIRSFRTQSSHPGLHSASVPGILSMDLQASDT
SKVLTGGADKSVVVFNKDTEQVTAVMKGHNKKVTNVIYHPTEEIVFSSSPDTTIRIWFVG
NASCQQVIRAHNAPVTGLSLHATGDYLLSCSEDQHWAFSDIASGRVLTKVTDDSIGHALT
CAQFHPDGLIFGTGTGSSIIKIWDLKEGTNVANFPGHSGPITALAFSENGYYLATAADDA
VVKLWDLRKLKNFKNITLDDRYEVKSLCFDQSGTYLAVAGTDLRVYLCKQWQELKVFSDH
TDMTTGVRFGQHTTFVSSVSMDRSLKFYGL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgtttgctcaatttgccacgaagtccctgagcaccctgtgttgtcaacggtg
tccaaccatgtctttgagcgtcgactcattgagaagtttatcgctgagaatggagttgat
ccaatcaatggggaggttctgtccgaggaccagcttgtagatattaaagtgagccccttg
gtcaagccgcgcccacccactgccaccagcatcccagccatcttgaagttgctgcaggat
gagtgggatgcgtgcatgctgcacagcttcaccttgcgccagcagctgcagacagcccgg
caggagctgtcccacgccctgtaccagcatgacgcggcctgccgtgtcattgccagactc
accaaagaggtcacagctgctcgtgaagctctggctaccctgaagccccaggccgcacca
ggcatggtccccgcccaaatcgctgcccttccagcaggtgctgcccagggtgtggttaga
cacgaacccatggaagctgctgagccaggaccggcagccatgacagaagacatcatacag
aagcttcaagagaaggccaacctgctgactgcagagcgtaagcgcagaggcaagaaagtt
ccggatgagctcatgccccctgatgacatcaggtccttcaggacccaatcctctcaccca
ggtttgcatagtgccagtgtaccaggtatcttgtccatggacctccaggcctcagataca
tcaaaggtgttgacaggtggtgcggacaagtcggttgttgttttcaacaaggacacagaa
caggtgacagccgtcatgaaaggtcacaacaagaaagtcaccaatgtcatttatcaccca
acagaggaaatcgtgttcagctcctctccggacacgacgatccgcatctggtttgttggt
aatgcctcctgccagcaagtcatccgtgcccacaatgctccggtcacaggtctgagcctg
cacgccacgggtgactaccttctgagttgctctgaagatcagcactgggcattctctgac
atcgcaagcggtcgcgtgctgaccaaggtcactgatgactccatcgggcatgctctgaca
tgtgcccagttccaccctgatggtctgatctttggcacaggaaccggcagcagcatcatt
aaaatctgggatttgaaagagggcaccaacgtggccaacttccccggccactcgggaccc
atcactgccttggccttctccgagaacggctactacctggcgactgccgccgacgatgcc
gtggtcaagctgtgggatttacgcaaactgaaaaatttcaagaatattaccctagatgat
agatacgaggtgaagtcactgtgctttgaccaaagtggaacctacttggctgtagctggc
actgatctgagagtttacctctgcaaacagtggcaggaactcaaggttttctcagatcac
acagacatgacaactggtgttcgatttggccagcacacaacctttgtatcttccgtcagc
atggatcgcagcctcaagttctatgggctctga
DBGET
integrated database retrieval system
