Acanthaster planci (crown-of-thorns starfish): 110986786
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Entry
110986786 CDS
T05078
Name
(RefSeq) collagen alpha-1(I) chain-like isoform X1
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110986786
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aplc00536
]
110986786
Glycosaminoglycan binding proteins [BR:
aplc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110986786
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
OLF
Motif
Other DBs
NCBI-GeneID:
110986786
NCBI-ProteinID:
XP_022104678
UniProt:
A0A8B7ZG94
LinkDB
All DBs
Position
Unknown
AA seq
1585 aa
AA seq
DB search
MTTDKSDACTHTLHFKILYFGLILLTAFSVTCFAVTYVFMTQLRTELGQKCSCPDGETLF
NITVRPRKGSKSHSARGPAHPERDGAPVVEHQHHRHHHNKSQVRAELELTAPVEPEAGDQ
RGQNRVRRFTFQNEGTSTILVSSIEACARLPITISMDTIRAFCNETITKCPPGPQGPAGK
PGSQGPKGSPGKQGEEGPMGYPGRRGEDGRTGPPGQKGDSGDNGAKGETGDRGSPGLSGQ
RGESGPQGPPGARGDRGDTGPMGPPSEPGQKGEAGDPGPAGTQGVKGCNGERGLPGPNGA
PGPRGEVGAVGPQGSKGDLGPTGVKGQPGADGQRGEPGQKGEIGGIGRQGSRGNPGPSGV
TGPPGTKGQRGESGPPGVMGDVGPQGLKGGRGPSGVTGPPGLHGEPGQKGESGIVGPQGP
KGNTGPQGQHGSNGISGAKGEKGTIGNQGLRGPKGLKGNTGPEGARGDKGERGTIGNKGL
RGPKGLIGNTGPEGARGDKGERGTIGNQGLRGPKGLRGNTGPEGARGDKGERGTIGNKGL
RGPKGLRGNTGPEGARGDKGERGQEGPRGLEGSAGPKGERGNPGEEGDPGPIGQPGVKGE
MGHVTIHTKGDGPKVLVGPPGAKGDKGDSGESGDVGPPGPLGPPGTKGTPGIKGLPGSFG
RPGEPGEKGALGLVGPKGATGHPGLRGQSGIDGLPGEDGAKGDKGDRGSDGLLGPSGAPG
LPGPDGARGPPGQKGARGTQGNEGQSGPKGNQGDIGTKGESGNTGPSGNQGPSGLPGRPG
LKGQRGEPGQKGELGGVGPKGDPGPLGVRGPPGSDGRHGETGEKGELGGVGPKGDMGPPG
VTGPPGLDGQRGEPGEKGEVGRSGAMGLQGLAGPSGSVGPQGPSGPQGLKGDPGGTGPQG
EPGRLGKQGQKGDKGCLGPEGLSGPQGQPGLIGMPGLKGQKGDLGERGLQGPRGSKGIMG
TRGSKGDPGQEGIMGPGGTPGRKGEKGNPGEEGDTGPIGPPGARGAMGDACNFDAILDNL
RELDNESLKLIMGPKGKQGGKGPKGNKGDTGRPGDMGPQGPTGQPGTKGTQGIKGRSGEK
GALGPVGPPGPTGYPGLRGQPGIDGLPGTDGAKGDKGDRGTDGLLGPTGAPGLHGINGTH
GSPGQKGDKGDKGQFGPEGQPGQKGEKGEEGGRAVTTGITGLVSTVDNGKSGFQMTTDSS
TSIPKPETSPSLDTDSTPNPAPQVTTAGLAPTTEPTLSPSPDLLSTPNPALRITTPTTVT
KTTLLPDFEATTTSALRITTPTTVTKTTLLPDFEATTTSALQSTIDDSTPIATLSSTPDT
TASTPKSECVLEKISAPEDHKYGSTYWGSWMQDTAPNPSQPDKIWVTKHLYGVTIFEYQN
MEALKLDTYTRYHTLSYTWAGTGHVVYNNSLYFHRSYLPEIVRYDLSSETVTAKVSIPFA
RHRRVRGQGYLYSSNYTYFDLAVDDNGLWVIYKTTELNQNLVVSRLDPEDLSIKTTIVSN
HPPRWAGEAFIICGRLYTTKSSEQFNSTVDFGVNLFTGEELADVDIPYRIGHLKMTMMSY
NPRNQLIYGWDKGYMVTYNVTLTKL
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgacaacggacaaaagcgatgcgtgtacccacacgctccatttcaaaatcctctacttt
ggattgatactattaactgctttctcagtaacctgttttgcggtcacctacgtctttatg
acgcagctgagaaccgagttgggccagaaatgctcatgtccggacggtgagacgctgttt
aacatcactgtgcggccgcggaagggctccaagagtcactcggcgcggggccctgcgcat
cctgagcgggatggagccccggtggtggagcatcaacatcatcgtcatcatcacaacaaa
agccaagtacgggccgagttggagctgacggcaccggtcgaaccagaggcaggtgaccaa
cgggggcagaacagggtgcgaagattcacctttcagaacgagggtaccagcactatcttg
gtctcgtccattgaggcctgcgcaagactacctattaccatttcgatggatacaataaga
gccttctgtaatgaaacaataaccaagtgcccaccaggaccccagggtccagcaggcaaa
ccaggcagtcaaggaccaaaaggttcaccaggtaagcagggtgaagagggcccgatgggt
tacccgggaagacgcggggaggacgggaggactgggccaccaggacaaaagggtgacagc
ggtgataatggagccaaaggtgaaaccggtgacagaggatcccctggactgtctggccaa
aggggcgaatcgggaccacaggggcccccaggggcgagaggtgaccgaggggacactgga
cctatgggtccgcctagtgaaccgggacaaaagggcgaggctggagacccaggacctgca
ggcacccaaggggttaaaggttgcaatggggagagaggactgccaggtcccaatggtgca
ccaggcccgaggggtgaagtgggagcagttggacctcaagggtccaagggtgatctgggg
ccaactggggtaaaaggtcaaccgggagccgatggtcagcgtggtgagccggggcaaaaa
ggtgaaataggtggcattggacgtcaagggtccagggggaatccaggcccatctggagta
acaggaccaccaggaactaaaggtcagcgtggtgagtctggcccaccgggtgtaatggga
gacgttggaccgcaaggactgaaggggggtcgcgggccatctggagttacgggaccacca
ggtctgcatggtgagccaggtcaaaagggtgaatcaggaattgttggaccccaagggccg
aagggtaacacgggtccacaaggacagcatggctcgaacggtatatcgggggcaaaaggt
gaaaaaggtaccataggtaatcaaggactgcgggggcccaagggtctcaaagggaacact
ggaccagagggcgctagaggtgacaaaggtgaaagaggtaccataggtaataaaggactg
cgggggcccaagggtctcatagggaacactggaccagagggcgctagaggtgacaaaggt
gaaagaggtactataggtaatcaaggactgcgggggcccaagggtctcagagggaacact
ggaccagagggcgctagaggtgacaaaggtgaaagaggtactataggtaataaaggactg
cgggggcccaagggtctcagagggaacactggaccagagggcgctagaggtgacaaaggt
gaaagaggacaagaggggccaagaggtctagaagggtctgctggaccaaaaggtgagagg
gggaacccaggagaagagggtgatcccggacccattgggcagcctggagtgaagggagag
atgggacacgtcactattcacacaaagggagacggacccaaggtgttagttgggccacct
ggggctaagggggataaaggtgattcaggagagtccggggacgtgggcccaccgggccca
ctaggccctcccggcacgaaaggcactccaggtatcaagggcctgccaggatcctttgga
cgccccggcgagcctggggagaagggagccctcggccttgtgggacccaagggggccact
gggcaccctgggctccgtggtcaatctggcattgatgggttacccggtgaggacggggca
aaaggggataagggcgacagagggtcagatgggttactgggtccttcaggggcaccaggt
ttacccggacccgatggagctcgaggacccccaggacaaaaaggagccagaggaacccaa
ggaaacgaggggcagtcaggaccaaagggtaaccaaggtgacattggaaccaaaggtgaa
agtggtaacactggaccctctggcaatcaaggaccatctggtttaccgggaagaccagga
ctcaaaggtcagcgcggtgaaccaggacaaaagggtgaacttggaggtgttgggcccaaa
ggtgatcctggaccacttggagttagaggaccaccggggtctgatggtcggcatggtgaa
acgggagaaaagggtgaactgggaggtgttgggcccaaaggtgatatgggaccacctgga
gttacaggaccaccagggttggatggtcagcgtggtgaaccaggagaaaaaggtgaagtg
gggaggtcaggagccatgggtctccagggtttggctggcccatctgggtctgtggggcct
cagggtccttcaggaccccaaggactcaagggcgatcccggtggaactggacctcaagga
gagccaggccgacttgggaagcaaggacagaagggagataagggttgcctgggcccagaa
gggctatccggcccacaaggacaaccgggcctgattggaatgccagggctgaaaggtcaa
aaaggcgacttgggagaaagaggcctgcagggccctcgaggttccaaaggcattatgggg
accagaggtagcaagggtgatccgggccaagagggaatcatggggcctggaggaactcct
ggacgaaagggtgagaagggtaacccaggagaagaaggtgatactggacccattggaccg
cctggagcgaggggagcgatgggagatgcatgcaattttgacgctattctggataattta
agggagttagacaatgaaagtctaaagctgatcatgggtcccaagggcaaacaaggggga
aaaggcccaaaagggaataaaggcgacactggaaggcccggggatatgggcccccaaggc
cccactggccaacctggtaccaaaggcacccagggtatcaagggccgttctggggagaag
ggagccctcggccctgtgggaccccctgggcctactgggtaccctggactacgtggacaa
cctggcatcgatgggctaccaggcacggacggagcgaagggtgacaaaggtgacagaggg
acagacgggttactgggtcccacaggggcacctgggttacacggaatcaatggaacgcat
ggatctccaggacaaaaaggggacaaaggagacaaaggacaatttggtcccgaaggacag
cctggacagaaaggagagaaaggggaagagggtggccgagcagtcacaactggtattacg
ggtcttgtcagtaccgttgacaatggaaagtcaggttttcaaatgactacagatagttcc
acttccattccaaagcccgagacatcgccatcccttgatacagacagcactcccaaccca
gctccccaggtgactacagccggccttgctcccactacagagcctacactatcaccatca
ccagacttactgagcactccaaacccagctcttcgcatcacaactccaacaacagtgacc
aagacaacgttgttgcctgacttcgaggctactacaacttcagctcttcgcatcacaact
ccaacaacagtgaccaagacaacgttgttgcctgacttcgaggctactacaacttcagct
cttcagagtactatagatgattccacacccattgccacattatcatcaacacctgacacg
acagcgagtactccaaagtcagagtgtgttctggaaaagatcagtgcgcccgaggaccac
aagtatggaagtacctactggggttcttggatgcaggacaccgccccaaatccgtcccaa
ccagacaagatatgggtgaccaagcatttgtatggagttaccattttcgaataccaaaat
atggaagctctaaagttggacacgtacactaggtaccacaccctctcatatacctgggct
ggcacgggccatgtggtctacaacaattccctatactttcaccgtagctacttgcccgag
attgtgcgatacgacctgagctcggagaccgtcacagccaaagtaagcattccgtttgcc
cggcaccgaagagtgcgtgggcaggggtacctgtacagttctaattacacttattttgac
cttgccgtcgatgacaacggactgtgggtaatttacaagaccacagagctcaaccagaac
cttgtggtgtccagactagatccagaggacctctccatcaagacgacaattgtgtccaat
caccccccgcgctgggcaggcgaagccttcatcatctgcggccggctgtatacaaccaag
agttctgagcaattcaactctactgtggactttggagtgaacctattcacaggagaggaa
ctggctgacgtggatattccctatcggatcggccacttaaaaatgaccatgatgtcctac
aacccaagaaatcaactgatttatggctgggacaaggggtacatggtgacatataatgtc
accttgactaaactctaa
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integrated database retrieval system
