Acanthaster planci (crown-of-thorns starfish): 110986800
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Entry
110986800 CDS
T05078
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110986800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aplc00536
]
110986800
Glycosaminoglycan binding proteins [BR:
aplc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110986800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
OLF
Motif
Other DBs
NCBI-GeneID:
110986800
NCBI-ProteinID:
XP_022104701
UniProt:
A0A8B7ZMV9
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MAGDKAGDGVHTRHVKILYFGLALLSIFTLACFVVTYVFVTQLRTELGQKCSCPDGEMLF
DITVLPSSGSTGDSARGPGHNDRGGIQAAEHQHRRRHHHESQVRAELELSAPGERGTDDL
RGLNRVRRGVTQGDEDPNSFRATSIEAYARLPITISIDSITAFCNKTISKCPPGPQGPAG
KQGSPGPQGPPGKQGAEGPMGEPGRPGEEGTNCNCSSDNFTLLLEKTTELALGTVIGQPG
PKGEAGEIGPSGPPGQSGEAGPQGPPGARGDQGDVGPMGPPGELGQKGDIGDEGPQGPRG
DPGLAGLDGMPGDPGQKGEVGEPGPVGPQGPIGPPGAIGSQGPDGSPGQKGDSGEIGPPG
EQGVPGNHGRHGKHGMKGDKGEKGELVFPGPIRMKGDQGDTGPAGMQGLKGEAGKDGTNC
SCVDPDADMMAELLLPTSAAAKQQLAGPPGPPGPQGPKGEKGEAGLRGYKGDMGPQGDLG
PQGPEGPNGTAGMKGAKGDVGAIGPPGPRGRRGDTGLEGARGQKGERGQEGLIGPDGAAG
LKGEKGDQGNVGDTGPIGPPRVRGEMGDLCNVTAFLKELMELDNETRKLIQGPPGLRGSP
GPIGPNGKQGEQGPRGDKGDTGEAGIVGPQGPVGPPGMKGTPGAKGLAGSFGYPGDPGEN
GDPGPPGPRGPVGDPGLQGQPGIDGLPGKEGAKGDMGDRGSDGLPGPIGVPGLPGANGTQ
GSPGQKGDKGDRGKLGPEGQPGREGTRGQKGEKGDRGIASGMVELGNSGDNGKPAPSKTT
DDPTPTTKPKQPPAVEMESSPNAECVLEKIGAPVDHEYGNTYWGSWMQDTAPDPPYPDKI
WITKHLLGDVIYEYKNMAALKSGIYSRYYRLTDVWSGTGHVIYNNALYYHNGGLPEIVRY
DMSSERVTARGTIPFALYRRMNGYGYLYDSDYTYLDLAIDDNGLWVVYKTTEHNQNLVVS
RVDLENLSIIKTIVSNHPQSSAGDAFIICGWLYTTKSSKNFHSTVDFAVNLYTGDELADA
DIPYQNGHMQMTVMSYNPRNQLIYGWDKGYMVTYNVTLTT
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggacaaagccggcgatggtgtccacactcgtcacgtcaaaatcctgtatttt
ggcttagcactgctgtcgatcttcacgttagcctgttttgtggtcacctacgtcttcgtg
acgcagctgagaaccgagcttggccagaaatgttcgtgtccggacggcgagatgctgttt
gacatcaccgttctgccgtcgagcggctccacgggtgactcggcacggggccccgggcac
aatgaccgcggtggtatccaggcggcggagcaccaacatcgccgccgtcatcatcacgaa
agccaagtacgagccgagttggagctgagcgcaccaggcgagcggggcaccgatgacctg
cgggggctgaacagggtgcgtagaggagtcactcaaggggacgaggatcctaattcattt
agggccacgtccatcgaggcttatgccagactacctattaccatttcgattgactcgatc
acagcattttgtaacaagactataagcaaatgtccaccaggaccccaaggtccagctggc
aaacagggtagcccaggaccacaaggccctccgggtaagcagggtgcagagggcccgatg
ggtgaaccaggaaggcccggggaagagggtacgaactgcaactgcagctcagacaatttc
accctgttgctggagaaaacaacagagttggcactgggaacagtaattgggcagcctgga
cccaagggtgaagctggggagatcggaccttctggacctccgggtcaaagtggtgaagca
ggaccacaggggccaccaggggctagaggtgaccagggggatgttggaccaatgggtcca
cctggtgaactaggacagaagggtgacataggggatgagggaccccaaggacccagaggt
gatccggggctagctggacttgatgggatgcctggtgatccaggacaaaagggcgaagta
ggggagccaggaccggtaggtccccaaggaccaattggcccacctggagccattgggtcc
cagggccctgatggaagcccaggacaaaagggtgattctggtgagattggaccccctgga
gagcaaggtgttccaggcaaccatggccgacatggtaagcacggaatgaagggggataaa
ggtgagaagggtgaactggttttcccaggaccaattcggatgaaaggtgaccaaggtgac
actggaccagcgggcatgcaaggattgaaaggagaggccggcaaggatggcacaaactgc
tcttgtgttgaccccgatgctgacatgatggcagagttacttcttccaacttctgccgca
gcaaagcagcagcttgcaggtccccctggcccacctggtccccaaggcccgaaaggtgaa
aagggtgaggcaggtctcaggggctataagggtgacatgggtccccagggtgacctaggt
ccacaaggacctgagggcccgaatggcacagcaggcatgaaaggtgcaaagggtgatgtg
ggtgcaattggaccaccagggcccaggggtcgtagaggtgacactgggctggagggcgcc
agaggtcagaagggtgaaagaggacaagaggggcttataggtcctgatggggctgctgga
cttaaaggtgagaaaggtgaccaaggaaatgtaggtgatactggacccattggaccaccc
agagtgaggggagaaatgggagatctgtgtaatgttactgctttccttaaggaattgatg
gaattggacaatgagactcgcaagcttatccagggtccacccgggctgaggggttcacca
ggccccattggccccaatgggaaacagggagagcagggcccccgaggggataaaggtgac
actggggaggctgggatagtgggcccacagggccccgtaggcccacctggcatgaaaggc
actccgggtgcgaagggcctggctggatcctttggctacccaggcgatcctggtgagaat
ggggacccaggacctcctggaccccgagggcctgttggggacccggggctacaaggccaa
ccgggcatcgatgggcttccgggcaaggaaggggccaagggggacatgggtgacagaggc
tcagatgggttaccgggtcccataggggtaccggggttacctggagccaatggaacccag
ggatctcctggacaaaaaggagacaaaggagaccgaggaaaacttggtcccgagggacag
cctggacgagaggggaccagaggacagaaaggagagaagggagaccgaggcatcgcatct
ggtatggtagaactcggcaattctggtgataatggaaagccagccccttcaaagactaca
gatgaccccacgcccactacaaaacccaaacaaccaccagcagttgaaatggagagctct
ccaaatgcagagtgcgtgctggaaaagatcggtgctcccgtagaccacgagtatggtaat
acctactggggttcttggatgcaggataccgccccagacccaccttaccccgacaagata
tggatcaccaagcatctccttggagacgtaatttatgaatacaaaaatatggccgccctt
aagtcgggcatatactctcggtactatcgcctgacagatgtctggtctggtacgggccat
gtaatctacaacaatgccttgtactaccacaatggtggcttgcccgaaatagtgcgctat
gacatgagctcagagagggtcacagcccggggcaccatcccgtttgccctgtaccgcagg
atgaatggatacgggtacctctacgactcagactatacctaccttgatctggccatcgac
gacaatggactttgggtggtatataagaccacagagcacaaccagaaccttgtagtgtcc
agagtggacctggaaaatctctcaatcatcaagacgattgtttccaatcacccccagagc
tctgctggggacgccttcatcatctgcggctggttgtatactaccaagagctccaagaac
ttccactccaccgtagactttgctgtgaatctttacaccggagatgaactggctgacgcg
gatatcccctatcagaatggccacatgcagatgaccgtgatgtcctacaacccaaggaat
caactgatatatggctgggacaaggggtacatggtgacatacaatgtcaccttgactact
taa
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