Acanthaster planci (crown-of-thorns starfish): 110986860
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Entry
110986860 CDS
T05078
Name
(RefSeq) protein NRDE2 homolog
KO
K26109
nuclear exosome regulator NRDE2
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110986860
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
110986860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NRDE-2
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_N
TPR_19
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
Suf
Motif
Other DBs
NCBI-GeneID:
110986860
NCBI-ProteinID:
XP_022104815
UniProt:
A0A8B7ZIV5
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MSNRSTSLFPSAESVRSEGVIKPNAGTVGLQQEHEEQQENESLHWLTNKSFRSDDAVAIA
RQHLRTAGDRLQECSKTLPRHRETSESSNSDHDSGRTGIEESNSSLKHLKESERFESSPL
VGAKQSRKRKHKRDHEAEPGHRHQRKRHHHDRHHRDKKRKHKKNRRKEHDSSDSSDESPS
QRDSMKLERKTASVAEGFFIDVKADRSNLCFNSLHFTDIVAYHRVGQSCLGLDTQRQSVT
WKSATKAKKKHKAESNTFRYFTRDLVDLVDDNVEVHVGSTEVSQAQTFQQRTNPTQSTDS
YIPIDRPSPPRLDFDPLRIYDPSTQAYLGSTLESGCSNLEKPYQQSAPTIAGHSAFTKTV
ASYNRHLHEDPHDIPKWLEFVHFQDNADYDRQLSAGCHDDASTAKQGNRKRRAKLIAEKK
LAILDKALLRNPNSVPLQLEQLEIGKEFLDGSEQTRQWEKLLKSNPDDIALWREYLLFKQ
SSFSSFSISKVAGLYGKCFQTLVARQADLDGVEAVDLESHLLDLFVSLCHFWRQAGHTEK
AVAAFQAMIELNCFCPPQFQQDVHLQGQVAFLETFWDSAEPRFGERGARGWASWMLKKEM
GGWEEVRVPEADEGSQESSTPVAYSSHQPLWQAWMREEVFREGTHFAPWRPDEAKGETEE
DCEDPERMVLFDDISQALFKLTARQNHCCLVLYFLDFLGVPVPGCLLQSPSKDTSTSGIY
LEQPSQIFPPVSKPNLTFAGVAGNCRTLEQLTSSLDCIKASGVRDANIENRAFEDFVEDV
FSQITPVFPQPMQTQLLLMRLDFQMQRAMITIDDKHRQKKRLKEAKRFAKKLLGQEENRN
NLDLWAALADWEHSLKNVEEARRVLQTALLFLGQPRTDASTQAAIKLACSFADMFVHYDL
ASATSVGVVDASNMEALHVLTSVMEDGLFSPLQEVQGQSVSATRILKARRHYQEMITQAL
DSHSKERGESQDVDPLEFSEWCQPLGSYIVHLTKCFAIFQYLTVGMQAASVIFESTLSVL
RRGRSTGSHLSPRQLQVDRELLTVAHVKLFSFYTYSNPSPLGALRNLIKSSLLEFPASPA
LLEAFIQSETRSHIAGRVRRYFDQATKQSGCPTTWLFATRAELLRQEAIFAATAAAEVKG
LLTPQIEVSLPETGISNRIRALFDRASESRSSRHCVLLWRMYMQFEVQQGNLKRAESIFY
NALQHCPWAKVLYMDAVRYFPSKLQDYQDLLMEKELRIRAPLEEVELLIKT
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcggtcgacatcgttgtttccaagtgctgaatcagtaagaagtgaaggggtc
atcaagccgaatgctggcacagtaggcctacagcaagaacatgaagaacaacaagagaat
gaaagtctacattggctgaccaataaaagcttccggagcgatgatgcagtcgcgatcgcc
aggcaacacctgagaacagcaggggacagactccaagaatgttccaaaactctccctcgt
catcgcgagacatcagagagctccaactccgaccacgattctggaagaaccggtatagaa
gaatcaaactcgagcttgaaacatctgaaagaaagtgaacgctttgagtcttcaccactg
gttggcgccaagcaaagcagaaagcgcaaacacaagcgagaccacgaagcagagcctggt
cacagacatcagaggaaaagacatcatcatgacagacatcacagagacaagaagagaaaa
cacaagaaaaacagaaggaaggaacatgattcaagtgactccagtgatgaaagcccctct
cagagagattccatgaaattggagaggaagacagctagtgtagctgagggtttcttcatt
gatgtgaaagcagacaggagcaatctgtgcttcaacagccttcatttcactgacattgtt
gcttaccatcgcgtcggacagtcatgccttggattggatacacagcgtcagtcagtgact
tggaagagtgctaccaaagctaagaagaaacacaaggcagagtcaaacaccttcagatat
ttcacacgggatcttgttgatttagtggatgataatgtggaagtacatgtaggaagtacc
gaggtcagtcaggcacaaacatttcaacaaaggacaaatccaacacagagtactgattcc
tacatccccatagaccgtccaagcccacccaggcttgacttcgaccctctcaggatttac
gatccttccacccaagcgtaccttggatccactctggagtcgggctgctcaaatcttgaa
aaaccctatcaacagtcagcacctaccattgctggccactcggctttcacaaagactgtg
gcgtcatacaaccgtcacctacatgaggaccctcatgacattcccaagtggctggagttc
gtccatttccaggacaatgccgattacgacaggcagttgtctgctggctgccatgacgat
gcaagcaccgcaaagcaaggcaaccggaaaaggagggccaagctgattgccgaaaagaag
ctggccattctcgacaaagctctcctgcgcaaccccaacagtgtcccgctgcaactcgaa
cagctggagattggtaaagaattcttggatggatcagagcagacaagacagtgggaaaag
ctcctgaagtccaacccagatgacattgctctctggagagagtacctcctcttcaagcag
tcctccttctctagtttctccatctctaaggtggctggactctatgggaagtgcttccag
actttggtcgccagacaggcagatctggatggtgttgaggctgtagacttagagagccat
ttactcgatttgtttgtcagcttatgccatttctggcggcaggcaggccacacagagaag
gcagtggccgcttttcaggccatgattgagctcaattgcttttgtccccctcagtttcaa
caagatgtgcacctgcagggccaggttgcatttctggagacattttgggacagcgccgag
ccccggtttggagagagaggggccagaggctgggctagctggatgctgaagaaggaaatg
ggaggctgggaagaagtgagagtccctgaggctgatgaaggttcacaggagagttccacc
cctgttgcgtattcatcgcaccaacccctatggcaagcctggatgcgtgaagaggttttc
agggaaggcactcactttgctccctggcgtcccgatgaagccaagggtgagacggaggaa
gactgtgaggatcctgagcgcatggtcctgtttgacgacatcagtcaggctctcttcaag
ctcactgctcggcagaaccactgttgtcttgtcctttacttccttgactttctcggtgtc
ccggtccctggctgtttgttgcaatctcccagtaaagataccagcacttcagggatttat
ctagaacagccaagccagatttttcctccagtcagtaaaccaaatttaacatttgcggga
gttgctggtaattgtaggaccctagagcagctgacaagtagcctagactgcatcaaagca
agtggtgtcagagatgccaacattgaaaatagggctttcgaagactttgtggaggacgtg
ttcagtcaaattacgccagtttttccccaacccatgcagacgcagcttctgttgatgagg
ttagactttcagatgcagagagcaatgattaccatagacgacaagcacagacagaagaag
cgtctcaaggaggcaaagaggtttgccaagaagcttctgggccaggaggagaaccgcaac
aacttggacctctgggctgccctagcagactgggaacactctctcaagaatgtggaggaa
gccagacgtgtgcttcaaacagctcttttgttcctaggacagccacggacagatgcatcc
acgcaagctgccatcaaattggcatgttcatttgcagacatgtttgtccattatgacctt
gcctccgccacatctgttggagtggtagatgcaagcaatatggaagcactacatgtattg
acttccgtgatggaagatggattgtttagtcctcttcaagaggtacaaggacagagtgtg
tcagccacgaggatcctgaaagctaggagacactaccaagagatgataactcaagccttg
gactctcactcaaaggaaagaggtgaaagccaagatgttgatccattagaattctcagag
tggtgtcaacctttaggaagctacattgtgcatctgaccaagtgctttgctatcttccag
tacttgactgtgggcatgcaggcggcatcagtcatcttcgagtccaccctgtcagtactc
aggcgaggcagatcgacaggctcccacttgagtccacggcagctacaagtggaccgagag
ttactgacggtggcccacgtcaagctattctcgttctacacctacagcaatcccagccct
ctaggagcattgaggaacctcattaagagctcccttctagagtttcctgccagcccggct
ttgttggaggcattcatccaatcagagacccgatcccacatcgccgggcgagtccgccgg
tattttgatcaggcaacaaaacaaagcggctgtcccactacatggttattcgcaaccagg
gcagagcttttgcgacaggaggctatatttgctgctactgctgctgcagaagtcaaaggc
ctattaactccacaaattgaagtgtcgttaccagagacggggataagcaatcgtattcgt
gccttgtttgacagagcatccgagagtcgcagttctcgacactgtgtcttgttgtggaga
atgtacatgcagtttgaggttcagcaaggcaacttgaagcgggctgaatccattttttac
aatgccttacagcactgtccgtgggccaaggttctgtacatggatgcagtcagatatttt
ccttccaagctgcaagattatcaggaccttcttatggagaaggagctccgcatccgcgcc
cccctggaggaagtggaactcctcatcaagacttga
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