Acanthaster planci (crown-of-thorns starfish): 110987013
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Entry
110987013 CDS
T05078
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110987013
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110987013
Spliceosome [BR:
aplc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110987013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
DNA_circ_N
Motif
Other DBs
NCBI-GeneID:
110987013
NCBI-ProteinID:
XP_022105083
UniProt:
A0A8B7ZHF7
LinkDB
All DBs
Position
Unknown
AA seq
815 aa
AA seq
DB search
MSRYERERPFDSSGRSDRRGGGGGFRGGSGSFGGGGGPPRFGGRGGARGGGGGMGGGGGL
REKFGQPGDRLRKPRWDPSKLAPFEKNFYKEHPDVTNRSPVEVDHFMRERSITTKGRNCP
RPVFKFHEACFPDYVMNELHKAGFTEPTAIQAQGWPLAMSGRDMVGIAQTGSGKTLSYIL
PAIVHINHQPFLERGDGPICLVLAPTRELAQQVQSVAFQFGRSSKIKSTCVYGGASKGPQ
LRDLERGSEIVIATPGRLIDFLEGGKTNLARCTYAVLDEADRMLDMGFEPQIRKIMEQIR
PDRQVLMWSATWPKEVCSLAEDFLRDYITVNIGSLSLSANHNILQIIDVCDDFQKDEKLI
KLLEQIMGEKENKTLIFAETKRRTDELTRKMRKDGWPAMCIHGDKSQPERDWVLNEFRSG
KAPILVATDVASRGLDVHDIKFVINYDYPNSSEDYVHRIGRTARSENTGTAYTFFTSNNA
KQASELIQVLQEANQKVHPKLVQLAQSARAFGKGRQRYRQGGSSFGGGNRGGSSDGYGGG
RGRGSGYGGSNNEKYGNNDFSQTNSRGGGNAGGRGGFRERGGDYGSNSRAPSYGEGNHGN
GAFGSGGPRRSGPQSGFQGGYPDRGVQNDKHSQAKEHRGFQPPHNDGPPNHPGRRPPPMP
MNQPQQSGNTGPKHMKPGHFSDGGMNREQKPGPLHMIQRPGGHNPQQNSHGNHMPPPPLR
QQQQGQPKAQPPKPPQKVDTSTLQQQAKAFAAQQQQQQQAQPPPAAMDPQQLQAAAGMDP
AAYSAAQQQYMQYYQAMAYWQQQQYQGTPPPTNAK
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtccagatatgaaagagagcgtccatttgattcttcagggcggtctgatagaagagga
ggaggcggagggtttcgtggaggcagtggcagttttggaggtggcggaggaccaccacga
tttggtgggcgtggcggagccagaggaggaggaggtggaatgggaggcggcggaggattg
agggagaagttcggacagccaggggacagactaaggaagcctagatgggacccttcaaaa
cttgctccctttgagaagaacttctacaaggagcatcccgatgtcaccaacagatctccg
gtagaggtagaccatttcatgagggagcggagcataacgacgaagggacggaattgcccc
agacccgtcttcaaattccacgaggcctgctttccagattacgtaatgaacgaacttcat
aaagctggcttcactgagcccactgccatccaggctcaaggttggccgttggccatgagt
ggcagggacatggtgggcatcgcccagacaggctccggcaaaacgctatcatatatactg
ccggctattgtacacatcaaccatcagccattcctggaaagaggagacggccctatttgt
ctagttctagctccaactcgagaacttgcccagcaggtacagagtgtcgcctttcagttt
ggtagatcctccaaaatcaagagcacatgtgtgtacggaggtgcatccaaaggaccccag
ctacgagatctagaaaggggaagcgagattgtcattgcaactccggggcgtctcatcgac
ttcctagaaggcggcaaaaccaatttggcccgatgcacctatgccgtcttggacgaggct
gaccgcatgttggatatggggtttgagccccaaatcaggaagatcatggaacagatacgg
cccgacagacaagttctgatgtggagtgccacgtggccaaaagaagtgtgctctctggcg
gaggatttcttgcgagactacatcactgtcaatatcgggtctctctccctctcggccaac
cacaacatcttgcagatcattgatgtctgcgacgactttcagaaagacgaaaaattgatc
aaactgctggagcagatcatgggagagaaggagaacaagacgctgatattcgccgagaca
aaacggagaacggatgagctgaccaggaaaatgcgcaaggatgggtggccggcgatgtgt
atacacggtgacaaatctcagcctgagcgagactgggtattgaatgaatttcgttcgggg
aaggcacctatcctggtggccacagacgttgcctcaagaggactcgatgtgcacgacatc
aagtttgtcataaattatgactatcccaactcctcggaggactacgtgcaccgcataggg
cgaacggcgcgcagtgagaacaccggtaccgcctacacgttcttcacgtccaacaacgcc
aagcaggccagcgagctcatccaggtccttcaggaggccaaccagaaggttcatcctaag
ctcgtacaactggcccagagcgctcgggcttttggcaaaggacggcaacgttaccggcaa
ggcggcagcagctttggaggaggtaatagaggaggctcgtcagatggatacggcggcggt
agaggcaggggctctggctacggtggatcaaacaacgaaaagtatggcaacaatgacttc
tctcaaaccaattctaggggagggggcaatgcgggcggaaggggtggctttagggaacga
ggcggggactatggcagcaacagtcgagccccctcttacggagaagggaatcacgggaat
ggggcctttggcagtggtggtccgcgcaggtctggcccccagtctggattccagggtggc
taccctgatcgtggtgtgcagaacgacaaacatagccaggccaaagagcacaggggtttc
cagccaccacacaatgacggccctcccaaccacccaggcaggaggcccccacccatgccc
atgaaccaaccccagcagtcgggtaataccgggcccaagcacatgaagccgggccatttc
tccgatggtggtatgaatcgggagcagaagcccggcccgttgcatatgatccaacgcccc
gggggtcataacccgcagcagaactcgcatggaaatcacatgccgccgccgccgctacgc
caacagcagcaagggcagcctaaagcacaaccccccaaaccgccccagaaagttgacaca
agcacgctgcagcagcaggccaaagcctttgccgcgcaacagcaacagcagcagcaggcc
cagccgccgccagccgccatggatccgcagcaactgcaagcagcggctggcatggatccg
gccgcgtattcggcagcgcagcagcagtacatgcaatactatcaggccatggcgtattgg
cagcaacagcagtatcaaggaaccccgccccctaccaatgctaaataa
DBGET
integrated database retrieval system
