Acanthaster planci (crown-of-thorns starfish): 110987416
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Entry
110987416 CDS
T05078
Name
(RefSeq) collagen alpha-2(I) chain-like
KO
K06236
collagen type I alpha
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc04512
ECM-receptor interaction
aplc04518
Integrin signaling
aplc04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110987416
04518 Integrin signaling
110987416
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110987416
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aplc00536
]
110987416
Glycosaminoglycan binding proteins [BR:
aplc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110987416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
110987416
NCBI-ProteinID:
XP_022105828
UniProt:
A0A8B7ZJL6
LinkDB
All DBs
Position
Unknown
AA seq
1022 aa
AA seq
DB search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NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagtagccagtgcctcccttgtaggaacgtcttaccatctacatggttgcttg
tgtcctgtgattgttggtcttccaggaaagccaggcctcccagggattcctggtcaagga
attgctggcccaaaaggagagagcggacaaagtggacaagcagggccacctggggagaaa
ggagatcagggtgctcgtggagcagctggcctggatggattgccagggcttcaaggtgca
aaaggggaaactggacctaaagggaatcatggagcagagggcagaagaggtccccaagga
gttacagggccaacagggagtcatggggcaactggcagtagaggagcgcaaggacctgtc
ggcccaaagggggaacaggggacaccagggacaaggggtggtcgaggagcgactggtagc
agaggtcctcaaggacctgctgggcaaaaaggggaacaaggacaaataggaccagacgga
cctaaaggcaatcaaggagcaacaggtaacacaggacctcagggacctgttggaccaaag
ggggaccatggggcaacaggtggcagaggacatcaaggagctgttgggccaaagggggaa
cggggccaagtagggccagaaggaccaaaaggaggtcaaggaccaactggtagcacaggt
cctcaaggagctgctgggacaaaaggggaccgtggtcacataggaccaggaggacctaaa
ggagatcaaggagcaactggtagcacaggtcctcaaggagctactgggccaaaaggggat
cgtggccacataggtccaggaggacacaaaggagatcaaggagcaactggaagcagaggt
cctccaggagccatcggaccaaaagggaacagtggagtaacaggaccagcaggacctaaa
gggaatcaaggagcaactggtaatagaggctttcaaggagttgctgggccaaaaggggac
catggcccaacaggaccaggaggacctaccggggagaaaggagcacctggaagcagaggt
cctcaaggagctgtggggccaaaagggcacaaaggactaacaggaacagctggacctaaa
gggaatcaaggatcaactggtagcacaggtcctcaaggagtcactgggccaaaagggaat
catggtcaaacaggacctgaaggacctaaaggggatcaaggagcaactggaagcacaggt
cctcaaggacccattggaccaaaaggggacagaggcccatcaggtccagaaggacccaaa
ggagatctaggggctaatggtgacagaggtcctcatggatctactgggcctaaaggggac
tgtggccccacaggaccacgaggacctaaaggaaatcaaggagcaactggtagcagaggt
cctcaaggaggcgctgggccaaaaggggactgtggccaaattggaccaggaggaccaaaa
ggagataaaggagcaactggtagcagaggtcctcaaggaccatctgggctaaaaggggac
agaggacaaacagggccagcaggacctaaagggaatcaaggagcaactggcaacagaggt
tctcaaggagctgcagggccaaaaggagaccttggccctacaggaccaggaggatcaaaa
ggaaatctaggagcaacaggcagcagaggtcctcaaggagctgcggggccaaaaggagac
cgtggttcagctggagcagaaggacccaagggggatcatggagcaactggcagcacaggt
cctcgaggagtacccgggcaaaaaggggaccgtgggccaacaggactacaaggacttaaa
ggggatcaaggagcaactggtagcagaggtcttcaaggagctgccgggcaaataggggac
cgtgggccaacaggaccaggaggacctaaaggggaccgaggaacagttggtagcagaggt
cctcaaggagccatcggtccaaaaggggaccatggcccaatgggaccaggaggacccaaa
ggggatcgaggaacaactggtagcagaggtcctccaggagccactgggccaaaagggaac
catggcccaataggcttaggaggacctaaaggtaaccaaggagcaactggtagcagaggt
cctcaaggagctgcagggccaaaaggggaacgtggagtaacaggaccaggtggaccaaaa
gggaatcaaggggcaacagggagcagaggtccccaaggagccacagggccaaaagggaat
catggccaaataggaccaagaggacctaaaggggatcaaggagcgattggtagcagaggt
cctcacggagccaccgggccaaaaggggacagaggactaataggaccaggaggacccaaa
ggagatcaaggagaacccggtagcagaggtattcaaggaactgctgggccaaaaggagac
cgtggattaacaggaccaggaggacctaaagggaatcaaggagtgaccgggagcagaggt
ccccaaggagcctctgggcaaagaggggaccgtggccctacaggaccagaaggactcaaa
gggaatcaaggagcaactggcaccagaggtcctcaaggagtcgctgggcaaaaaggggag
agtggccctaatggagcagcaggagccaaagggaatcaaggagcaacaggcagcagaggt
cctcaaggagttgctgggcaaaaaggggacagtggccctagaggagcagcaggagccaaa
gggaatcagggagcaactggcagcataggtcctcaaggagtaccaggtcaaaaaggggac
catggaacaacaggactagcaggacctagaggggatcaaggagcaactggcagcagaggt
ccccaaggagctcctgggccaaaaggagaccgtggcccttcaggaccagggggacctaaa
gggaatacaggtgcaactggcagcagaggtcctcaaggggttaccgggccaaaagggtac
agaggacaaacaggttcaattggaccaagagggtatcgaggagcaacaggcagcagaggt
gctccaggtgttaatgggcaaaaaggtcagaaaggtgaagaagggtattcatggtgttgt
gatttctga
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