Acanthaster planci (crown-of-thorns starfish): 110987988
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Entry
110987988 CDS
T05078
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110987988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aplc03400
]
110987988
DNA repair and recombination proteins [BR:
aplc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110987988
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
BUD22
Motif
Other DBs
NCBI-GeneID:
110987988
NCBI-ProteinID:
XP_022106903
UniProt:
A0A8B7ZMR9
LinkDB
All DBs
Position
Unknown
AA seq
1369 aa
AA seq
DB search
MPKNTLFSYFTKSPAVARKATSPVIADDVGEQKSKSPKETAKGTQSNGTGMGMKRGKDCK
FSIGDIVWAKLEGYPWWPSLVCNHPSLGSHVKQGKRPQVHVQFFDEPHSRSWIQEKCVEL
FRLQDFERGGKFFTQKPDIVKAAKEAKSALAMKLEERLNLVVCIKSDEEEEDGEEEMEQT
GMNSTDKTGTSDNGDDTDEDEGEVGHKTRRHATRVTRRTPRSVAKSRKRRRIIEQSDDDS
SGDDYRPDDSEDSSDSGSSGVDENEVSEPSSESEAGTPQKSRKRKRGATTTPSIGKGRKV
LKPTFNVMTPNPKEPSEPKGTPQAQKTFTTPTVSCKTKSRLSSFLAPEASPGPSAPLDSD
ESRFPHQRYEWLKDGQRKDLNGNPQNHPDYDPRTLYVPRSFLDKATPAMRQWWEMKSQHF
DTVLFFKMGKFYELYHMDAEVGVKELGLIFMKGENAHSGFPEIAYGRYSDTLIQKGFRVA
RVEQTETPDMMQERIKKMSKMVTKYDKVVKREICRISTKGTRTFSFIDGDTCVAQHSYLL
AVKETFDDSSGGERTYGICFVDTSIGKFHLGQFQDDRHCSRFRTLIAHYTPAQVIYERGK
LSSSSQQILTNNLLSVIKEPLVPGTEFWDASKTLKTLAESKYFEDKEGKGRRLDEEEGGQ
GSMPTVLWDMVSESDTLGHSAKEGYELAVSALGACTWYLKKCCLEQELLSMGNFELYTPL
DVDASVKENVVDFSTGRQHMVLDGVTLNNLEILENVTTGTPEGTLLERLDLCCTPFGKRL
FKQWLCAPLCNPNSINDRLNAVEDLIDIPDKMAEVNELLKKLPDLERLLSKIHTLGSARR
SRDHPDSRAIFFEDTTYSKRKIQDFLTALGGFKTAGDIVQIFKNSTSNFKSNILRQCVSP
VSDGGRFPDLKEHLVFFENAFDQDKAKQAGAIIPSKGVDPEYDGAIAGMKAANQRLDDYL
EKQRKRLGCRAVVYWGTGKNRFQLEVPESALARHTPEDYELQSAKKGFKRYWTPELKELF
AELVAEEERRDVALRDSMRRVFYAFDEHYGDWDQAIQCLSVLDVLQSLSNVSQAGDGPMC
RPEIVPPTPNMQPFIAIQNGRHPCISHTFTGGDFIPNDTYIGTTDNAMETNSEMGTSCCV
LVTGPNMGGKSTLMRQAGLIIIMAQLGCYVPAEGCRLTPVDRVFTRLGARDNILSGESTF
FVELSETSSILQHATAHSLVLMDELGRGTATYDGTAIASAVVKELSETIQCRTLFSTHYH
SLVEEFGHDANIQLGHMACMVENENEDDPSQETITFLYKFAAGACPKSYGFNAAKLADIP
DEIVLVARKKAHDFEKSADRLKAFRTLQRLSLGPDLARKLTTMQQMIRL
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaaataccttgttttcgtattttaccaagagtccagcagtagcacggaaggct
acatcgccagtgattgctgacgatgtcggggaacaaaagtccaagtcgccgaaggagaca
gccaagggcacacaatcgaacgggacggggatgggcatgaagaggggcaaagactgcaag
ttcagtattggtgatatcgtctgggccaagctggaaggctatccttggtggcccagccta
gtctgcaatcacccatccctaggctcacatgtcaagcaaggcaagaggccacaggtgcac
gtgcagttctttgatgagccccacagccgatcctggatacaagaaaaatgcgtggagctt
ttcaggctgcaagacttcgagcgcggagggaagttcttcacccagaaaccggacatcgtc
aaggcggcaaaggaggctaagagtgccctcgccatgaaattagaggagagactgaatctt
gttgtatgcatcaaatcggacgaggaagaagaggatggagaggaagaaatggaacaaact
ggaatgaacagcactgacaagactggcaccagtgataacggagatgacacggatgaagat
gaaggggaggttggacacaagaccaggagacatgccactcgggtgaccagacgtacccct
cgctcagtggctaaaagtagaaagagaaggcgcatcattgagcaatctgacgatgacagt
tctggtgacgattacagaccagacgacagtgaagattcgtcagacagcggcagttcgggc
gtggacgaaaacgaagtttcggaaccatcctcggaatcagaggccggcacaccgcagaaa
tcgcggaagagaaaacggggcgccaccactactccctccattggcaaagggaggaaggtc
ctgaagccaactttcaacgttatgacccctaaccccaaggagccttccgaacccaagggc
accccccaggcccaaaagacattcaccactcccaccgtcagctgtaagacaaagtcaaga
ttgtcaagcttcctagctccagaggcgagcccagggcccagtgcacctcttgatagtgac
gaatctcgatttccccaccagcgatacgaatggctgaaagacggtcaaagaaaagatctt
aacggaaacccacagaatcatcctgactatgatcccaggacgttgtacgtacccagaagt
ttcctggacaaagcaacacctgcaatgcgacagtggtgggagatgaaatcacagcatttt
gacacagttttgttctttaagatgggaaagttttacgagctctatcacatggatgctgaa
gtgggcgtgaaggaactgggtctgattttcatgaagggtgaaaatgctcattcaggcttt
ccagagatagcctacggtcgctatagcgacactctcatccagaagggcttccgtgttgcc
agggtggagcagacagaaactccagacatgatgcaagagagaatcaagaaaatgtccaaa
atggtgacaaaatatgacaaagtggtcaaacgagaaatttgtaggatctccacgaaagga
acgcgcacgttcagttttatcgatggggatacgtgcgtagctcagcacagctacctcctg
gctgtcaaggagacatttgatgacagcagcggaggagagaggacatatggtatctgcttc
gttgatacatccattggaaagtttcacctgggtcaattccaagacgatcgtcactgttca
cgattccgaacgttgatcgcacactacactccagcccaggtcatctatgagagaggtaaa
ctctcatccagttcccagcagatcctcactaacaatctcctgtcagtcatcaaggagccc
ctggtgcctggcacggaattctgggacgccagcaagacgcttaagacactggccgagagc
aagtactttgaggacaaggaggggaaggggcggagactggatgaggaggagggagggcag
ggaagcatgcctactgtgctttgggacatggtttctgaatcggacacactgggtcattca
gccaaagagggctatgagttagcagttagcgctttgggagcctgcacatggtacctcaag
aaatgctgccttgaacaagaactcctgtccatggggaactttgagctgtacacaccgctg
gacgttgatgccagcgttaaggaaaatgtggtggacttttcaaccgggagacagcatatg
gttctggatggagtaacactgaacaatctggaaatcctggagaatgtgaccacagggact
ccagagggcaccctacttgagaggctggacctgtgctgtacaccgtttggcaagaggttg
ttcaaacagtggctgtgtgcccctctgtgcaaccctaactccatcaacgacagactaaat
gctgtggaagatttgatagacataccagacaagatggcagaggtcaatgaactcttgaag
aaactgcctgatctagaaaggctcctcagcaaaattcacacgctgggttcagccagacgt
agccgagatcaccctgatagtcgagcaatcttctttgaggacacaacgtacagcaagcgc
aaaatccaggactttttgacagcattggggggcttcaaaactgctggcgatatcgtccag
atttttaagaattctacctccaacttcaagtccaacattctacggcagtgtgtcagccca
gtcagtgatggaggtcgcttccctgacctcaaggaacatttggtattctttgaaaatgcc
tttgaccaagacaaagccaagcaggctggtgctatcataccaagcaagggtgttgacccc
gaatacgacggtgccatcgctggcatgaaggcagccaatcagagactggatgactacctg
gagaaacaacgcaagaggcttgggtgtagggccgtcgtgtactggggtacgggaaagaac
cgcttccagctggaggtaccagaaagcgccctcgcccgccacacacccgaggactacgag
ctgcagtcggccaagaagggcttcaagcggtactggacgccggagttgaaggagctgttt
gctgaactagtcgccgaggaggaacgcagggacgtggcgttgcgggactccatgaggcgg
gtgttctacgccttcgatgaacactatggcgactgggaccaagccatccagtgtctgtca
gtcctggatgtccttcaaagtctgtccaacgtcagccaggctggtgacgggccaatgtgt
cgtcctgagatcgtcccaccaactccaaatatgcagcctttcattgccattcaaaatgga
cgtcatccatgtattagtcacacattcactggaggtgatttcattccaaatgacacatac
attggaactactgataatgccatggaaaccaactcagagatgggtaccagttgctgcgta
ttggtcaccgggcccaacatgggtggaaagtcaaccttgatgaggcaggctggattgatc
atcatcatggctcagcttggttgctatgtacccgccgaagggtgtcgactgacgccggtg
gatcgtgtgttcacccggcttggtgccagggataacatactttctggggaaagtactttc
tttgttgaactgagtgagacatcgagtatcctccagcatgccacagcacactcactggtc
ctgatggacgagctaggaaggggaacagccacctatgatggaacagccattgctagcgct
gtcgtcaaggagctgtctgagaccatccaatgccgcacactcttctcaactcactatcac
tcactggttgaagagttcggtcacgacgccaatatacaactgggccatatggcctgcatg
gtggagaatgagaatgaagatgatccaagccaagagaccatcacattcctctacaagttt
gccgccggagcttgccctaagagttacggattcaacgcggccaaacttgccgatatacca
gatgagatcgttttggttgcaaggaagaaggctcacgactttgagaagtcagctgacaga
ctcaaggcattcagaactctacagagactgagtctggggccagaccttgccaggaaattg
acaaccatgcagcagatgatccggttgtaa
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