Acanthaster planci (crown-of-thorns starfish): 110988505
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Entry
110988505 CDS
T05078
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013
Nucleocytoplasmic transport
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110988505
03015 mRNA surveillance pathway
110988505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110988505
03041 Spliceosome [BR:
aplc03041
]
110988505
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110988505
Spliceosome [BR:
aplc03041
]
Complex C
Other components
EJC/TREX
110988505
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Pinin_SDK_N
MdcG_N
UCR_TM
Motif
Other DBs
NCBI-GeneID:
110988505
NCBI-ProteinID:
XP_022107770
UniProt:
A0A8B7ZSC6
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MANVAALLQEKLDKAKENLQSVDENIRKLTGREPGERRFPFVGERERDRDQRRVSLGIQG
PRGRGRGRGGGVQRADAFQRLGLPITRRQSTGSAFSRLGGRVDGPLPKRPRRKSNDDDDD
LPKHTIQSSVVATPKVVKTRQESIQEQNKDAQDQKRNRRMFGHLLGTLQKFKQESSDMES
KERKRSEIEKKLEEQALEEKKAVAAQKVHLFTERRNQQAELQKLERLVDIAKEQDAWDAH
TKKLNNFIRTKAKPPIFYKPAKPSLVTEKKLLDSKELLNEMMKKRRAKIEAEIRELQSEP
AGKETEPMGKETAEVKGKTKDKKKKHGKGKHEERKNGKQRERRGSGEGAPTTPPDARDSE
GEDSALGKAKDLVEDRGKEGEAGEGEPGKDGVGKRGSESEASSMEEEEEGELQERNGREA
EPDGEAHPVERAGCPPDDIDDGADRDEGKEKVEGEAGKEEDFRSALYREDDQRPELSWED
EPMEQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtggctgcgttgctacaggagaagcttgacaaagcgaaagaaaatctacaa
agcgtcgatgaaaacatacgtaaacttacaggaagagagccgggggaaaggaggtttcca
tttgttggagaacgggagagagatagggaccaacgcagagtgtctttggggatccagggg
ccacggggaaggggtagaggcagaggaggaggagtgcagagggcagatgcttttcagcgt
ttgggcttacccatcaccaggaggcaaagcaccggtagtgcattcagcaggctgggaggc
cgtgtggacggaccactgcccaagcgcccacgtaggaagagtaacgatgacgatgatgat
ctgcccaagcacaccatccagtcctctgttgtagctacccctaaggttgtcaaaacacgc
caagagtccatccaggagcagaacaaggatgcccaagatcaaaaaaggaatcggcgtatg
tttggccacctgctgggaaccctgcagaaattcaagcaggaatccagcgacatggagagc
aaggagcggaagcgatcggagattgaaaagaagctggaggaacaagcgttggaggagaag
aaggcggtggcagcccagaaggtgcacctcttcacggagcgacgcaaccagcaagccgag
ctgcagaaactggagaggctggttgatatcgcaaaagagcaagatgcctgggacgcccac
accaagaagctgaacaacttcatccgcaccaaggccaagcccccgatattctacaagcca
gccaagccctcgctggtgactgagaaaaaactgctggactccaaggagctgctgaatgag
atgatgaagaagcgccgagctaagatcgaagcggagatacgagagttgcagtcagagcct
gccgggaaggagacagagcccatgggaaaggagacagccgaggtaaagggtaagaccaaa
gataaaaagaagaagcatggtaagggtaagcatgaggagcgcaagaacggcaaacagaga
gaacggaggggcagtggcgagggagcacccacgacgccgccggatgccagggatagcgaa
ggggaggattcagccctcgggaaagccaaggacttggtcgaggatagaggcaaggagggg
gaagcaggggagggtgagccaggtaaggatggggtcgggaaacggggatcggaatcagaa
gcttcatccatggaggaagaggaggagggagagttgcaggagagaaacggccgggaggcc
gagccagatggagaagcccatccggtggaaagagccggctgcccaccggatgatattgac
gatggcgcagaccgagatgaagggaaggaaaaggttgaaggggaggctgggaaggaggag
gacttccggagcgctttgtaccgagaggatgaccagaggcctgagttgtcctgggaggat
gaacccatggagcagtga
DBGET
integrated database retrieval system
