Acanthaster planci (crown-of-thorns starfish): 110988724
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Entry
110988724 CDS
T05078
Name
(RefSeq) regulator of nonsense transcripts 1-like
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
AAA_16
SLFN-g3_helicase
UvrD-helicase
Helicase_RecD
DEAD
nSTAND3
ATPase
SRP54
AAA_22
DUF269
NACHT
AAA
Motif
Other DBs
NCBI-GeneID:
110988724
NCBI-ProteinID:
XP_022108204
UniProt:
A0A8B7ZS25
LinkDB
All DBs
Position
Unknown
AA seq
1147 aa
AA seq
DB search
MSVDAYGPSSQSLTFLDTEDGELLGADTQGTDFEYNVGDFTLPSQTQTQSQASQLDVVSQ
SQSQAGLSLDTKPAQQNGFVEDGVASTVQTLKELTFEEDEEETYYTKDLPDHACRYCGIH
DPAAVVLCNTTKKWFCNGRGNTSGSHIVNHLVRAKCKEVTLHRDSPVGETALECYNCGCR
NVFLLGFIPAKVDSVVVLLCRQPCATQSNLKDMNWDPSQWQPLIQDRCFLGWLVKVPSEQ
EQLRARQISAAQINRLEELWKNNSEATLEDLEKPGADEEPASVMLRYEDAYTYQNIFGPL
VKMEADYDRRTKENQNQSNISVRWDIGLNRKTRAFFNFPKKEDLKLMQGDELRVRYLGDL
QEPWSGVGHVVKIPDNYGDEICIELKSNAKVPVNCITNFVVDFVWKSTSFDRMQSALKTL
AVDETAVSSYLYHKLLGHEVENMVIKSSLPKRFSAPNLPELNHSQVSAVRTVLTRPLSLI
QGPPGTGKTVTSASIVYHLAKQGLGQVLVCAPSNIAVDQLTEKIHKTGLKVVRLSAKSRE
AIDSPVSFLTLHKQVRNMEGSEEQTKLQALKDEIGELSSADEKRYRTLKRNSERELLQNA
DVICCTCVGAGDPRLARFRFRAVLIDESTQATEPECLIPVVLGCKQVILVGDHCQLGPVV
MCKKAANAGLSQSLFERLVVLGIRPIRLQVQYRMHPSLSAFPSNIFYEGSLQNGVSAADR
IAKAVEFPWPQPDKPMFFYATSGQEEISSSGTSFLNRTEASNVEKITTSFLRAGVKPEQI
GIITPYEGQRAFIVQYMQYSGPLNVKLYQEVEIASVDAFQGREKDYVILSCVRANDHQGI
GFLNDPRRLNVALTRCRFGVIIVGNPKVLSRHPLWNHLLTYYKEQKVLVEGPLNNLKESL
IQFSKPRKLVNTANPGGRFMTTAMFSAKEAMIPGSIYDRSGMMNGDSSRYVPGPGRIHDQ
MGYIQQGSAQFGGANLPMPVNMFMPPPPQPGAHFFNQGMRGGGPSPMGGQQVPQQRGKGA
PPYSKRRGKTPGQQQQGVHGRGPQPGVGGATQGGASQNMSQYNLSMQSQEGTMAFSQGPL
TQGMSMSQPGLSQAGFSQPGLSQPGLSQPELSQDSYLGEEFKSQMDAALSQDSTYQGDRN
YQHGFGY
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtagatgcgtacgggccgagctctcagagtttaactttcctggacacggaagac
ggcgagttattaggcgctgacacacagggcacggacttcgagtacaatgtgggggacttc
accttgccatcccaaactcagacacagagccaagcatcacagctggatgtggtctcacaa
agccagagtcaggccggcctgtctttggataccaaaccagcccagcagaatggttttgtc
gaagatggcgtagcctccaccgtgcagactctaaaggaattgacatttgaggaggacgag
gaggagacgtactacaccaaggatctccctgaccatgcctgcaggtattgtggaattcac
gacccagccgctgtggtgttgtgcaacaccaccaagaagtggttctgcaatgggcgggga
aacacctctggaagtcacattgtcaaccacctggtgcgtgccaagtgcaaggaggtgacc
ctccatcgggacagccccgtgggagagacggccctggagtgctacaactgcggctgccgc
aatgtgttcctgctgggtttcattccggccaaggtggactcggtggtcgtgctgctgtgc
cgtcagccctgcgccacccagagcaacttgaaggacatgaattgggatccgtcccagtgg
cagcccctgatccaggaccgctgcttcctaggctggttggtcaaggtgccctcggagcag
gagcagctgcgggccaggcagatctcggccgcccagatcaaccggctggaggagctgtgg
aagaacaactcagaggccacgttggaggacctggagaagcctggtgccgacgaagagccg
gcgtcagttatgctgcgttatgaggatgcctacacctatcagaacatctttggccccctg
gttaagatggaggccgattatgaccgtcggaccaaggagaatcagaaccagagcaacatc
tctgtgcgttgggatatcggactgaatcgcaagacaagggcattcttcaattttcccaag
aaagaagatctgaagctgatgcagggagatgagctgagggtacgttaccttggcgacttg
caagaaccttggtcaggagttggacatgtagtcaagataccggacaattatggagacgag
atctgcatcgagttgaagagtaatgccaaggtcccagtcaactgcatcaccaactttgtg
gttgactttgtctggaaatccacgtcttttgacaggatgcagagtgccctgaagaccctc
gccgtggacgagacagccgtgtccagctacctctaccacaagctgttgggccacgaggtg
gagaacatggtcatcaagagcagcctgcccaagcgcttctcggcacccaacctgcctgag
ctgaaccactcgcaggtgtcggccgtccgcacggtgctgacccgccctctcagcctcatc
cagggcccacctggtactggaaagacagtgacttcagcaagcatcgtgtaccatcttgca
aagcaagggctgggacaagtcttggtgtgtgcccccagcaacatcgccgtagaccagctg
acggagaagattcacaagacggggctgaaggtggtcaggcttagtgccaagagccgagag
gccatcgattcccctgtctcattcctcaccctccacaaacaggtgcgcaacatggaagga
agtgaggagcagacaaaactgcaggccctgaaggatgagattggagagttgtccagtgcc
gacgagaaacgctaccgcacactcaagaggaactctgagagggaattgttacagaacgct
gacgtgatttgctgcacgtgcgtcggtgcaggtgatccgcgcctagctcgcttccgtttc
agggcagtgctgattgacgagagcactcaggccaccgaaccagagtgtctcatacctgtt
gtcctcggatgcaaacaggtgatccttgtcggtgaccattgccagctgggtcctgtggtc
atgtgcaagaaggcagccaatgccggcctgtcgcagtcgctgtttgagcggctggtggtt
ctgggcatccgaccaatcaggctgcaggtccaataccgcatgcacccatccctgagcgca
ttcccgtcaaatatcttctatgaaggatcgcttcagaacggagtgtcagcagcggaccgt
atcgccaaggctgttgagtttccctggccccaacctgataagcccatgttcttctatgct
acctctgggcaagaggaaatatcgagctcaggaacctcctttctcaacaggacggaggcg
tccaacgtggagaagatcaccacctccttcctccgtgccggcgtcaaacccgagcagatc
ggcatcatcaccccgtatgagggccagcgggccttcattgtccagtacatgcagtacagt
ggcccgctcaatgtcaagctttaccaggaggtggagatcgccagcgtggacgccttccaa
gggcgagagaaggactacgtcatcctgtcctgcgtccgggccaatgaccaccaaggcatt
gggttcctgaatgatccacgccgtctgaatgtggctctgacccgttgcaggttcggtgta
atcatcgtgggcaatcccaaggtcctatcccgtcaccctctgtggaaccacctcctgacc
tactacaaggagcagaaggtgctggtggaggggccactgaacaacctcaaggagagcctg
atccaattcagcaagcccaggaagctggtcaacactgccaacccgggcggtcgcttcatg
acaacggccatgttcagtgccaaggaggccatgataccaggcagcatatacgaccgatca
gggatgatgaacggggattccagtcgctacgtccctggaccgggtcgcatccacgaccag
atgggttacatccagcagggctccgcccagtttgggggagccaaccttcccatgccggtc
aacatgttcatgcccccacccccacagcctggcgctcacttcttcaaccaggggatgagg
ggtggcggcccatctcccatggggggccagcaggtgccccagcagaggggcaaaggggca
ccaccctactccaagaggagggggaagacgccgggccagcagcaacaaggggtgcatggg
aggggtccccagccaggagtgggtggagccactcagggtggggccagtcagaatatgtcg
cagtacaacctgtctatgcagagccaggaaggcaccatggcgttttcccagggaccactc
acccagggtatgtccatgagtcagccgggcctgtctcaagctggcttctctcagcccggc
ctgtctcagccgggcctgtcccagcccgagctctcgcaggacagctacttgggggaggag
ttcaaatcccagatggacgcagccctctcccaagactccacctatcagggggatcgcaac
taccagcacggctttggctactag
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