Acanthaster planci (crown-of-thorns starfish): 110989011
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Entry
110989011 CDS
T05078
Name
(RefSeq) ATP-dependent RNA helicase DDX1-like isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110989011
03016 Transfer RNA biogenesis [BR:
aplc03016
]
110989011
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110989011
Spliceosome [BR:
aplc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110989011
Transfer RNA biogenesis [BR:
aplc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110989011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
FlgD_ig
Motif
Other DBs
NCBI-GeneID:
110989011
NCBI-ProteinID:
XP_022108756
UniProt:
A0A8B7ZYV3
LinkDB
All DBs
Position
Unknown
AA seq
737 aa
AA seq
DB search
MTAFAEFGCIEELVQAVEDIDWLLPTDVQAEAIPLILGGGDVLMAAETGSGKTGAFCLPV
IQIVHESLRDGASGKLEGKIKAKADTSKWQMNVFDRGDAMAIDESGLLCQSREFSWHGTR
SNQGVINRGKYYYEATVTDEGLCRVGWSTSNASLDLGTDKNSFGFGGTGKKSFGRQFDSY
GEAFGKDDVIGCYLDLDNGTIEYAKNGVYLGHAFDIPQHLLRQPMFAAVVLKNAEMNFNF
GATQLKYRLEGGYKPLCKAPEDCVMKSPNSAGQQAISGKAQPNAPKAIILEPSRELAEQT
LNQIRLFKKHLNQHSPRELLIIGGMPAKQQIDALQNGIDIVVATPGRIDDLIGTGKLLLN
QVQFFILDEADGLLSAGYGQQISRMHEQIPKVTIDGKRLQMIVCSATLHSFEVKKLAEKL
MHFPTWVDLKGQDSVPETVHHVVVKVDAISDASWQRKGNKVKTDGVHSNDRIQYGSQSRE
TLSEAVKILKIDYLLRAINEHNMDRGIIFCRTKLDCDNCEKYMATLGGGPLAPVNHQYSC
VCLHGDRKPPERRDNLQKFKDGKVRFLICTDVAARGIDVKGVPYVVNVTLPDEKESYVHR
IGRVGRAERMGLAMSFVSAVPEKVWYHSCPSRGRGCYNTDLKEHGGCCIWYNERQYLADI
EEHLGVVIDQAEPNMKVAVNEFDGKVVYGQKKINTGSNYKGHVAVLAPSVKELAQLEKQA
QTSFLGFSGVQNTLFAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgtttgccgagtttgggtgcattgaagaactggtgcaggctgtggaagacatt
gactggctgctgcctactgatgtgcaggctgaggccattccattaatccttggagggggt
gatgtcctcatggcagcagagactggaagtggaaagacaggggctttctgtctgccagtg
attcaaattgtccacgagtcactgcgagatggtgcaagtgggaaactagaaggaaaaatc
aaggccaaagcagatacctctaagtggcagatgaatgtgtttgatagaggggatgccatg
gctattgatgagtcaggccttttgtgccagagcagagagttctcatggcatgggacacgt
tccaaccaaggcgttattaacagaggcaaatactactatgaagctacggtcactgacgag
ggcttgtgtcgtgtcggctggtccacgtccaatgcaagcctggatcttggcactgataaa
aacagctttgggtttggaggcacaggaaagaagtcatttggtcggcagtttgacagctat
ggagaggcatttggcaaagatgacgtcatcggttgctatctagacttggacaatggcacc
atcgagtacgctaaaaatggtgtgtaccttggacatgcgtttgatattcctcagcacctt
ctcagacaaccaatgttcgcagccgttgttctgaagaatgctgaaatgaatttcaacttt
ggagccacacagttgaagtacagactggagggaggttataagcccctatgcaaggcgcca
gaagactgtgtaatgaaatcccctaattcagctggacagcaggccatatctggcaaagcc
caacctaatgcgcccaaagctatcatacttgagccgtcaagggaattagctgagcagact
ctcaatcagatccggcttttcaagaaacatctgaaccagcacagcccaagggagttgttg
attattggaggcatgcctgccaaacagcaaattgatgccttgcagaatgggattgatata
gtggtggcgacccctggtagaattgatgaccttatcggcactggcaaactcctactgaat
caggttcagtttttcattcttgatgaagccgatggcttgctgtcagctggctatgggcaa
cagatcagccgcatgcatgagcagattcccaaggtgaccatagatgggaaacgactacag
atgattgtttgttctgcaaccctgcattcatttgaagtgaagaaacttgccgagaagttg
atgcatttcccaacatgggtggacctgaagggtcaagacagcgtaccagagaccgtccac
cacgtggtcgtcaaggtggatgccatcagcgatgcctcctggcaacgcaaaggaaacaaa
gtaaagaccgatggtgtacatagcaatgacagaatacagtacggcagtcagagtagagag
acgctctcagaggcagtcaaaatcttgaagatcgattacctgctgagagccattaacgag
cacaacatggaccgcggtatcatcttctgccgcaccaagctggactgcgacaactgtgag
aaatacatggcaactctaggcggaggtccgctagctcctgtcaatcatcagtattcctgt
gtctgtctccacggggatcgcaagcctcctgagcgccgtgacaacctgcagaagttcaag
gacggaaaggtacgtttcttaatctgcactgacgttgcagcaagaggcattgatgtcaaa
ggagtcccttatgttgtgaatgtcacactacctgatgagaaggagagttatgtccatcgc
atcggccgtgtcggacgagcagaaagaatgggacttgctatgtcatttgtgtcagcagta
cctgaaaaggtgtggtaccactcatgtcctagtcgtgggcgtggctgctacaacacagac
ctaaaggagcatggggggtgctgcatatggtacaatgaaaggcagtatttagcagacatt
gaagaacatctgggtgttgtgatcgaccaagctgaacccaacatgaaagtagcagtcaat
gagtttgatggcaaagtggtctacggacagaagaaaatcaatacagggagtaactacaaa
ggtcatgttgccgtcttggccccatccgtcaaggaattggcacagctggaaaagcaggca
cagacatccttcctggggttctctggggtacagaacacgctgtttgcagcttga
DBGET
integrated database retrieval system
