Acanthaster planci (crown-of-thorns starfish): 110989029
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Entry
110989029 CDS
T05078
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110989029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110989029
Spliceosome [BR:
aplc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
110989029
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
PRP4
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_TEP1_C
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_Vps41
NBCH_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD_LRWD1
WD40_RFWD3
Beta-prop_Nup120_160
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
110989029
NCBI-ProteinID:
XP_022108791
UniProt:
A0A8B7ZYY4
LinkDB
All DBs
Position
Unknown
AA seq
507 aa
AA seq
DB search
MPSYISMSDDDDAPVAKRSKIHYGTLEERLREEDGKGAIQAGIEAGNISISSAETFDLED
HVSEQRLELLAEFERRKKLRQITVSTDDAQVKAQLRQRGEPICLFGEDKADRRERLRQLL
ALTGDDELMRQQNEELEREKKKKEEEQTTWYHEGPDSLKRARLWIAEYSLPRLGGKRIQE
AKQAKNIPESKRNARXQELHRHIRALTAEASQIGDTRPISYCQFSPNSKILATASWSGLI
KLWSIPELNEIRILRGHNHNVGAVVFHPQATLSLDDAACCMASCAADGSVKLWNLKSDEP
VANIEGHAARVARLAYHPSGRFLGTTCFDMSWRLWDLEAQEEILHQEGHSRAVYSIAFQG
DGSLCATGGMDAFGRVWDLRTGRCIMFMEGHLKSVLDLSFSPNGYQLATGSEDHSVKIWD
LRQRKCAYTIPAHSNIVSGVKFQGSSGDFLISCSYDNTAKVWAHPGWSPLITLAGHDSKL
MAVDISTDQHYIATASFDRTFKLWASE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgccaagttatattagtatgtcagatgacgatgatgcaccggtggccaagaggtccaag
attcattatggaaccctggaagagcgactgagagaagaggatggtaaaggagccattcag
gctggaattgaggctggcaacatcagcatctcatcagcggaaacgttcgaccttgaagat
cacgtgagcgaacagaggctggagcttcttgccgaattcgagaggaggaagaagcttcgt
caaatcaccgtgtcgactgatgatgcccaggtcaaggcccagctgagacaaagaggagaa
ccaatatgtctgttcggagaggataaagcagacaggcgagaacgtttacgccagttgcta
gcacttactggagatgacgagttaatgcgacaacagaatgaagaactagaacgggagaag
aagaaaaaagaggaagaacaaactacttggtaccacgagggaccagacagtctgaagaga
gccagattatggattgcagaatactccttgccaaggttgggcggaaagagaatacaggag
gccaagcaggctaagaatatcccagaatccaagaggaacgcgagancacaggaactgcac
cggcatatcagggcacttacagctgaggcaagtcagattggagatacacggcctatctca
tattgtcaattcagtcctaattccaaaatccttgcaacagcgtcctggagtggactcatc
aagttgtggtccatcccagaactgaatgaaatcagaatcctaagaggtcacaaccacaac
gtgggtgctgtggtgttccacccccaggccacattatcgctggatgacgctgcctgctgt
atggcgtcgtgcgctgctgacgggagcgtcaagctctggaacttaaaaagtgatgaaccg
gtagccaatattgagggtcacgctgccagggtagcacgtctggcttatcatccgtcagga
aggtttctgggaacaacctgttttgacatgtcctggcgtctctgggatctggaagcacaa
gaggagattctccaccaagagggccacagcagggcagtgtactccattgccttccagggg
gatggctccctatgtgcaacaggtggtatggatgcctttggacgggtgtgggacctgaga
actggccggtgcattatgttcatggagggccacctcaagtctgtcctggatttgagcttc
tccccaaatggttaccagcttgcaactggcagtgaagatcactccgttaagatatgggat
ctcaggcagcgcaagtgcgcttacaccattccagcccacagcaacatagtctcgggggtc
aaattccaaggttcatccggtgactttctaatcagttgctcatatgacaacacagcaaag
gtgtgggcgcatcccggatggtcacccctaatcacgctagcaggacacgacagcaagctc
atggcggtggacatctccaccgatcagcactacatcgccacggcgtccttcgaccgcacg
ttcaagctatgggcgtcagagtag
DBGET
integrated database retrieval system
