Acanthaster planci (crown-of-thorns starfish): 110989293
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Entry
110989293 CDS
T05078
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33-like
KO
K15542
polyadenylation factor subunit 2
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110989293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110989293
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110989293
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
PROPPIN
Motif
Other DBs
NCBI-GeneID:
110989293
NCBI-ProteinID:
XP_022109269
UniProt:
A0A8B7ZV24
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MEGGGGTAVASPQSSQGFFHRPRLPYREKNQFYKHHHYYNRMLGEQGPNNATNFDGKRMR
KSITRKTVDYNSSVIKLLESRVWQRDSRDVRWIQPDPTYSHELSLPETYLHNPINAVTTR
FVRTSTNKIRCPIFCCVWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDYPVRAMTW
SHNDLWLLTGDHLGYIKYWQSNMNNVKMYQAHKDQPIRGASFSPTDSKITTCADDGTVRI
FDFVRCYEERVLRGHGAEVKCVDWHPQKGLVVSGSKDSQQPIKLWDPRSSNPLATLHAHK
STVMAVRFNQNGNWLLTASRDHVCKLFDIRTMKEMYTFRGHKKEATAISWHPIHETMFAS
GGSDGSLLFWEVGNEKEVASVETAHDSIVWSLAWHPLGHILASASNDHTTKFWTRNRPGD
RMRDRYNLNMLPIGTSEEMLEFDDDTSALPSIPGMGLEHGLPEHLKKPEEGLTEDDISLD
TSIPGLESSVEELAKLKPQPQRKVPYAKPIPADFQRQWDKTKAPGIAPQQTETSQDEDAG
KKEAKDSEDDEAKKMERMVKNSGVAVAQAHQAVLNAMKNAKENGGQLPLSGMMMGQPHPG
GPPVMGPMPGMGMDGHSGMGGPAGRGRPPGGSGPEGMNPNEGAFNPGPRGMPAPNQPGTG
SKGKAGIPALMGIRLNGPSSRVPGNGGPPEVGVMDVPPPNLPKEMMDAPEGRTLGQDFLP
HSPPLPLPSDNTDFPTASGKDRNRRDFSDPRDEDLRGDIDLRQGFTDVDMRQQFHDPPPP
KRFDGRFDRGESPPGGWGNRMPPRDGLHQDFDMRQQRGPHGGARMGPRGDDPRDPPFDDL
RHSRSEDRPDLDALRRREGSPGGRRREDFMDEDLRQPPGRFLGGGPPGSRSWRGGDSSEE
DPFRGFDPGQDPGPSRGSFPDRGGFGSQDEDMRGGTRSRFGLDEPFDPDFRPKGLLPHPG
DDGPRKPRSLPLLGDRDDRANYPDLGSPHDSGDMKRTWNEGPGDGRDMDQLEPFGNFGGP
GGPGRGQGNMWRGGRGDIRGGGPGMRGRGDPSMRGRGDPGMRGSPSGFRGPFRGGMGRGG
MGRGGMGRGGPGW
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggtgggggcaccgccgtggcctcgccacagtccagccagggcttcttccac
cggccccggctaccgtaccgggagaagaaccagttctacaagcaccaccactattacaac
cgcatgctaggtgagcagggtcccaacaacgccaccaactttgacgggaagcgcatgcgg
aagagtatcacccggaagacggtggactacaactcgtcggtcatcaagctgctggagtct
cgtgtttggcaaagggactctcgggatgtgcgttggatacagcccgacccgacgtactca
cacgagctatcattaccagagacatatttgcacaatcccatcaatgcggtcaccactcga
tttgtccgaacctccactaacaagatccgctgcccaatcttctgctgtgtctggacccct
gagggtcgtaggctggtgacaggggcatccagtggagaattcaccctctggaacggactg
accttcaactttgaaacaatccttcaggcccacgactaccccgtgcgggccatgacctgg
agccacaacgacctctggctgctgacaggtgaccacctgggctacatcaagtactggcag
tccaacatgaacaacgtcaagatgtaccaggctcacaaggaccagcccatccgaggcgca
agcttctcaccgactgactccaaaatcacaacatgcgccgatgacgggacagtcaggatc
tttgattttgtacgatgctatgaagagcgcgtgcttagaggtcatggggcagaggtcaag
tgcgtggactggcacccacagaagggcctggttgtgtcaggcagcaaggacagccagcag
cccatcaagctgtgggacccccgctccagcaacccattggccacactccacgctcacaag
agcaccgtcatggccgtccgtttcaaccagaacggcaactggctcctgacagcctcccgc
gaccatgtctgcaagctcttcgacatccgcaccatgaaggagatgtacacattccggggc
cacaagaaagaggccacagccatttcatggcatccaattcacgagaccatgttcgctagc
ggtggttcagatggatctctcctcttctgggaagtcgggaatgagaaggaagtggctagc
gtagagactgcccacgacagcatcgtttggagcctagcctggcatccactgggtcacatc
ctagcttcggcatccaacgatcataccacaaaattctggaccaggaatcgacccggtgac
agaatgcgagaccgctacaacttgaacatgttgcccatcgggacatctgaagaaatgttg
gagtttgatgatgatacctcagcattgccctccatcccaggcatgggactggagcacggt
ctgccagaacacctcaagaaacccgaagaggggctcacggaggatgacatctctctggac
acctccatccctggcctggagtcttcagtggaagagcttgccaagctcaagcctcagccc
cagcgcaaggtgccctacgccaagcccattccagctgacttccagcgacaatgggacaag
accaaggcccccggcattgctccgcagcagacagagacgtcgcaagacgaagatgccggg
aagaaggaggctaaagacagcgaagacgatgaagctaagaagatggaaaggatggtaaag
aactcaggcgtggctgtggcccaagctcatcaggccgtcctaaatgcaatgaagaatgcc
aaggagaatggcgggcagctgcccctatcgggaatgatgatgggacagcctcacccagga
gggccacctgtgatgggtcccatgcccggaatggggatggatggacactcggggatgggt
gggcccgctggtagaggcagacctccaggggggagtggacctgaagggatgaatccaaat
gagggtgcatttaacccgggtccccgtggtatgccggctccgaatcagcctgggacgggg
tccaagggtaaggcggggatcccagccctcatggggatacgcctgaacggccccagttct
agagtacctggcaatggtgggccaccagaagtgggtgtgatggatgtaccgccccctaac
cttcccaaggaaatgatggatgcacctgagggtaggaccttaggtcaggatttcttgcct
cattccccacccctgccactccccagtgacaacacagactttcctactgcctcaggcaag
gacagaaaccgacgggattttagcgacccaagagatgaggatctccgtggggacattgat
ctccggcagggctttactgacgtggatatgaggcaacagtttcacgacccaccccctccc
aaacgatttgacgggcgatttgaccgtggtgagagtcccccaggtggttggggcaataga
atgccacctagggatggactacaccaggactttgatatgagacagcagaggggaccccat
gggggagcaaggatgggacccaggggggatgacccaagggatccgccttttgatgacctc
aggcactcaagatctgaggatagaccagatctggatgccctccgaaggcgagagggctca
ccaggagggaggagacgggaagatttcatggatgaggacttgcgacagcctcctgggcgg
ttcctgggaggaggcccccctggatcgaggtcctggagagggggtgattcatctgaggaa
gatccttttcgagggtttgaccctggccaggatcctgggccatcaagaggcagcttccca
gacaggggtgggttcggatcacaagatgaagatatgcgaggaggaactaggagtcgattt
ggcttggatgagccattcgacccagactttcgtcccaaaggactgctgccacatccaggt
gacgatgggccacgaaagccccgctcactgcccctactcggtgaccgtgatgacagggcg
aattaccccgaccttgggtccccacatgacagcggcgacatgaaaagaacttggaatgag
gggccaggagatggccgagacatggaccaactggaaccatttgggaactttggaggtccg
ggtggcccaggccgcggacagggaaacatgtggcgtggagggcggggggacataagggga
gggggcccaggcatgagaggccggggagaccccagcatgagggggagaggggatccgggg
atgaggggcagtccgtcgggattccgggggccatttcgtggtggaatgggaagggggggc
atggggaggggtggcatgggtcgaggcggcccaggctggtga
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