KEGG   Acanthaster planci (crown-of-thorns starfish): 110989486
Entry
110989486         CDS       T05078                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013  Nucleocytoplasmic transport
aplc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110989486
  09122 Translation
   03013 Nucleocytoplasmic transport
    110989486
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aplc03019]
    110989486
   03041 Spliceosome [BR:aplc03041]
    110989486
Messenger RNA biogenesis [BR:aplc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     110989486
Spliceosome [BR:aplc03041]
 Complex C
  Other components
   EJC/TREX
    110989486
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    110989486
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_EML RMC1_N eIF2A Beta-prop_Vps41 WD40_RFWD3 Beta-prop_NOL10_N WD40_MABP1-WDR62_1st Tricorn_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C DSE1_N Beta-prop_WDR35_TULP_N NBCH_WD40 Beta-prop_HPS5 PAC11 Beta-prop_WDR75_1st TRM82_WD WDR90_beta-prop_4th Beta-prop_EIPR1 CFAP251_N Beta-prop_SPT8 B-prop_COPA_B_2nd PD40 Beta-prop_NUP159_NUP214 ASA1 Beta-prop_ELP1_1st Beta-prop_DCAF12 Beta-prop_ACSF4 WD_LRWD1 DPPIV_N
Other DBs
NCBI-GeneID: 110989486
NCBI-ProteinID: XP_022109582
UniProt: A0A8B7ZWW1
LinkDB
Position
Unknown
AA seq 322 aa
MASYLDEIQKYFLHHNRTKEFSGNHTAKVHSVGWSCDGRLLASGSFDKTVSVFLLERDRM
SREATYRGHTDSVDQLCWHPFHPELFVTASGDKTIRIWDARANKTVATVNTKGENINICW
SPDGQTIAVGNKEDLVTFVDARTHRVKSEEQFKFEVNEISWNNENDLFFLTNGHGCINVL
SYPDLKSLHVLNAHPANCICIEFDPTGKYFATGSADALASLWDVKELVCLRTFSRLDWPV
RTLSFSHDGKMLASASEDLAIDIACVETGEKITEVQCESPTFTVSWHPKRHLLAFACDDK
DKYNRDRDAGTVKLFGLSNDLC
NT seq 969 nt   +upstreamnt  +downstreamnt
atggcgtcatatttggatgaaattcaaaaatattttctgcaccacaaccggacgaaggaa
ttcagtggaaatcatactgccaaagtacattcagttggctggagctgcgatggtcgtctt
cttgcatcagggtctttcgacaaaactgtgagcgtgttccttctagaaagagatcgaatg
tcaagagaagcaacatatcgaggtcacacagacagtgttgaccaactatgctggcaccca
tttcatccagagttatttgttacggcatctggagataagaccatcagaatatgggatgca
agagctaacaagacagtagcaacagttaatacaaaaggtgagaacataaatatctgctgg
agtccagatggccagacaattgctgttggcaacaaggaagatcttgtgacctttgtggat
gccagaacccatcgtgtaaaatctgaggaacaatttaaatttgaagtcaatgaaatttca
tggaataacgagaatgacttatttttcctgactaatgggcatggctgcataaatgtttta
agctatcctgatctgaaatctcttcacgttctcaatgctcaccctgccaactgtatttgc
attgagtttgacccaactggaaagtactttgcaacaggaagtgctgatgctcttgccagt
ttgtgggatgtcaaagaacttgtttgcctgaggactttctcaagactggattggcctgtg
agaacattaagcttcagccatgatggaaagatgcttgcatctgcttcagaggatctggct
attgacattgcttgtgttgaaacaggtgagaagatcactgaagtccagtgtgaaagtcca
acattcacagtttcatggcatcccaagagacatttgctggcatttgcgtgtgatgataaa
gataagtacaacagagatagagatgctggcactgttaaactgtttggactctcaaatgat
ttgtgttga

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