Acanthaster planci (crown-of-thorns starfish): 110989592
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Entry
110989592 CDS
T05078
Name
(RefSeq) nucleoporin NUP188 homolog isoform X1
KO
K14311
nuclear pore complex protein Nup188
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110989592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110989592
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110989592
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
110989592
NCBI-ProteinID:
XP_022109784
UniProt:
A0A8B7ZWI4
LinkDB
All DBs
Position
Unknown
AA seq
1724 aa
AA seq
DB search
MMLLHCLKHLLSFHRDTEHPFQEQYLECVLKLQKGKVCDMLLQQYETSFNSPAPSRHKRG
PLMSERHSIRWCLQGLTEQCELLEIILLYVRDQDDPSGYLLNLAQLFQKQAFGTRQPYRY
LLDAEELAHRLTARISFLCGMLLVESMNLDALIGLPDSDKPPSHRLVSDQKLAGELTSIF
QNLGTQPSHGPVFLAWLALHCTLWPEGDMAGVRRLGQQAVQLQVFRYISGQLVNLAGEKK
EILSLVCHVCVYSLLTLVLTLFQEDTLGGRDELIHLACQLLKQPQLCMEFWDSDVEGGIF
SLLRSSTNSFPLDFNPLLQLLTPLTSEGSRQVFAFVEHLPSFTEPLDNNRSMDLQSTNQK
GVWKLMQDKVVLPAGDHCRAFIMPAGSLGVQFQRGRVDLIRWNFDFSGWQLFQCLIDWLL
VRIRQGNIPSGVQVSQAEAIIDLVTHTLDADWSLFPELQLITDYLYQLISSSLTSLTNPP
LGLLSVCLKCIGVLAKHQPRQVWQSIQKSGFLPHTGNVYSDAAEAVSGEGIYPAEYGKLL
ASQEQPTGEYPVTLEFLRLLKTLLQGLCTSDVDVATSQDLLACVVFVQREIFTTFHNWRY
ARFDDREEVGKCSLDVFHVVLHVLPAISRTQTTQGASDKVKSVVSVRETCIHGFLYTPAG
EALLFIVASGIDNLEQRIIDQGSSFEGAAARLSQLIKMSLSILNRLLLLRPPSQPPCPLE
QALTSHTTGLPHQPHLIGLVAGYIYHRHDPRLPTLATLLLKRVAMVAPMSIFGCLGSQAA
AIRDIYLSRLQAHSEDERLKVGILELLTVAVETQPGLSELFLNLEKVKPASAERPESEKP
TVPSSPKVEIGKVSCLHAVLDTIEEVKQGSTHCPPDLHCAALGFLQALWLDCRETALSVL
RTRPKFWDDVAAPLFKDLEVPEGGTQAISSEIKIRAYAFRILALECYYVSSENLQKGLKA
VLRKLKQEDRYSHWSKCVHSLLESAAEQQTDLEEYLIRQHQLLVLVQAWRTLLLVSTSAN
GKAVELSDTKVQSAILSDIAASIDSLSCHLDSVLNQKACSLLSSLYMSLLTHWTSTQVSQ
WKHVDILVDVLERITDSDSPGLGNAATAIMAALTTLLKQRTSKQALHVETMETLLPIICL
ALQQSSQFYLKSQGDINKSLPSIKGSAQGFVSGRSQEYGQGTVTGSVGGSGLTADNLALP
GGQGRVAGTRSTNGLETRDKERASMPAVSKYSMPTIAAYLLDELLVGEKTRTSMWLPLLR
QHGMLNLLLTTLQSCLQVRQGLHYSEAVLLLLLDLASIPQAAESMQTTGLVQQICLPLLQ
LHQQNGEDAMTWSKVAKTEKADTLTWLSIYRHSISVVTVMLGTLQHSFLSDALDFFGVHR
ERMMQCLDAVRYNQSRACLMEAETTSAFIYQLSLFAKDLGSRLRTGEVQVLLLGVTSLCH
SCMALLIRPKLLQYLTERSAKHADLNKQQRMVLTMNGTPVRLRQQTSMTDLTEGKLSPEV
QHIQARLLVILGHGLAALRHFSPDLLTILLNPSVDILEYPMLLGLGFSTPALETDVQPSF
GMLISCINTCVQLLSKLDSSKTSLSPDETPPTIVAVAGPSAPVQHRYMDRPMIMFLLETS
VELLMVQGLRCLKDPTLPLRDRQRVKRELGTELATFLQSLQRYFRRGGGPSSPSSASPSS
SSSGLLRTPSASILSKSASHTLFSEAPEQAFFRVVQYFMQQILR
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atgatgctccttcattgcctcaaacatctactcagcttccacagagacacagaacatcca
ttccaggaacagtatttggagtgcgttttaaagctgcaaaagggaaaggtgtgtgatatg
ttactgcagcagtatgagaccagcttcaactcaccggcgcccagcaggcacaagagggga
cccctaatgagtgagaggcacagcatccgatggtgtctccagggtcttacagaacagtgt
gagctactggagataattctgttgtacgtccgagaccaggacgatccatcaggatatctt
cttaatttggcacagcttttccagaaacaagcttttgggacacgtcagccttacagatac
ctgctggatgcggaggagctggcccaccggttgacagcacgcatcagctttctgtgtggt
atgctactagttgagtccatgaacctggatgcactgattggcctaccagattcggacaaa
ccacccagtcaccgtcttgtgtcagaccaaaagctagctggggagctgacctccatcttc
cagaatctcggcacccagccgtcccacggcccagtcttcctggcctggctggccctccac
tgcaccctctggcccgagggggacatggccggggtgcgcaggctgggccagcaggccgta
cagctgcaggtgttccgctacatctcaggtcaactggtcaacctcgccggggagaagaag
gagattctcagtctggtgtgtcatgtctgtgtttactcccttctgaccttggtattgact
ctgtttcaagaggacacgcttggtggacgagacgaattgatacatcttgcatgtcagctt
cttaagcaacctcaactatgcatggagttttgggatagcgatgtagagggtggcatattc
tctctccttcggtcctccactaacagcttcccgctggacttcaatccgttacttcaactc
ctgaccccactgacaagcgagggcagcagacaggtgtttgctttcgtggaacatctcccg
tccttcacggagcccttggacaataaccggtcaatggacctgcagagcaccaatcagaaa
ggagtctggaagttgatgcaggacaaggtggtcctgccagcaggtgatcattgtcgagct
tttatcatgccagctggttcactgggtgtccagtttcagaggggcagggtcgacctgatc
cgttggaattttgatttcagtggctggcagttattccaatgtctgattgactggctattg
gtcagaattagacagggcaacataccatcaggtgtccaagtcagccaagctgaggccatc
attgaccttgtgacccacactctggatgctgattggtcgctgttccctgagcttcagcta
atcacagactacctctatcaattgatatcaagtagcttgacttctctgacgaatccccca
ctgggtctgttgtctgtctgcctgaagtgcatcggggtcctggctaaacaccagcccaga
caggtttggcagagtatacagaagtctggtttcctaccccataccggcaatgtgtacagt
gatgcagcagaagcagtcagtggagagggtatctacccagctgaatatggcaagctgcta
gccagccaggagcaacccacgggggagtatcccgtcaccctggagtttctccgcctcctc
aagacactcctccagggtctgtgtacaagcgatgttgacgttgctacgtcccaggacctg
ctagcgtgcgtagtctttgtacagcgagagatattcacaactttccacaattggagatac
gctcgctttgatgacagggaagaagtgggcaagtgcagtctggacgttttccacgtggtg
ctccacgttcttccagccattagcagaacccaaacaacccaaggtgcctctgacaaagtc
aagagtgtagtgtcagttcgtgagacctgcatccatggctttctctacaccccagcaggt
gaggcattgctgtttatcgttgcctcaggcattgacaacctggaacagagaatcatcgat
caaggaagttcctttgaaggtgccgccgcccgcctgtcccagctcatcaagatgtctctc
tccatcctcaaccgtctgctcctcctcaggccccccagccaacccccctgccccctggag
caggccctgacctcccacaccacgggcctgccccaccagccccacctcatcggcttggtg
gccggctacatctatcaccgtcatgacccccgcctgcctacgctggccacgctgctactc
aagagggttgccatggttgcgcctatgtccatttttggctgtcttgggagtcaggcagcg
gccataagggacatctacctgtctcgtctgcaggcacactcggaggatgaaagattaaag
gtcggcatcctggaactcttgacggttgccgtggagactcagcctggactgagcgaactc
ttcctgaatttggagaaggtcaagccggcgtccgcggagaggccagagagtgagaagccc
actgtgccatccagcccaaaggtggagattggtaaagtcagctgtctgcatgctgtgctg
gacaccattgaagaagtcaaacagggttctactcattgtccaccggaccttcactgtgct
gccctggggttcctccaggcactctggctggactgtagagagactgccctctctgtgctg
cgcaccagacctaaattctgggatgatgtagctgcccctctgtttaaagatcttgaagtt
ccagagggaggaacacaggcaatcagttctgagatcaaaatccgcgcctacgccttcagg
attcttgcactggagtgttactacgtctcaagtgaaaatcttcagaagggtctaaaagct
gttctgaggaagctgaagcaagaggacagatactcacactggtcaaagtgcgtccattcc
ctgctggagtctgcggccgagcagcagacagacctcgaggagtacctgatccgtcagcac
cagctgttggtgctggtgcaggcctggcgtacgctcctgctggtatccacctcagctaac
ggcaaagccgtggaattgtctgacactaaggtccagtcggccatcttgtccgatattgcg
gcttccatcgatagcctgtcctgtcatcttgactctgtcctgaatcagaaagcctgttcc
ctgctgtccagtctctacatgtcactcctgacacactggacaagcacccaggtcagtcag
tggaagcacgtagacattctggttgacgtgctggagagaatcaccgactcagactcacca
ggacttggcaacgctgccacagccatcatggccgctctcactacgttactcaagcaacgc
accagcaagcaagccctccatgtggaaacgatggaaactctccttccgatcatatgcctg
gcactgcaacagagcagccagttctacctcaagtcccagggtgacatcaataagtccctt
ccttctatcaaggggtctgctcaggggtttgtcagtgggaggagtcaggagtatggccag
ggaactgtcacagggtctgtcggtggcagtggtctgaccgctgacaatttagctttacca
ggtggccaggggagggtggcaggaactaggtccacaaatggactggagacaagagacaag
gaacgtgccagtatgccagctgtttccaaatattcgatgccaactatcgctgcgtatctc
ctcgatgagctgctagtcggtgagaagacaagaaccagcatgtggttgccgctgctcaga
cagcacggcatgctgaacctgctgctcaccaccctgcagtcctgcctacaggtcaggcag
ggattacactactctgaggctgtgctgttactgcttctggacttggctagtattccacag
gctgcagaatccatgcagaccacgggtctggtacaacagatatgtctgccactgttgcaa
ctacatcaacagaatggggaagatgcaatgacctggagcaaggttgccaagacggagaag
gcagatacactcacctggctgtccatttatcgccattctatctccgtggtgacggtgatg
ctggggactttgcagcacagtttcctatcagatgccttggacttctttggagttcatcgg
gaacgcatgatgcagtgcctggatgctgtgcgatacaaccagagccgagcctgtctgatg
gaggctgagacaaccagtgccttcatctaccagctctccctctttgccaaggacctagga
agtcggctgaggactggcgaggtccaggtgctgctgctgggggtgacatcgctgtgccac
agctgcatggcactgctgatcaggccaaagctgctgcagtatctgactgagaggagcgcc
aagcacgcagacttgaacaagcagcagcggatggtgctgaccatgaacggcaccccggtg
aggctacgacagcagacatccatgacggacctgacagagggcaaactcagcccagaggtg
cagcacatccaggctagattgctggtgattctcggccatggcttggctgccctgagacat
ttcagccctgatctgctgaccattctcctgaacccaagtgttgatatcttggagtatccg
atgttactaggtcttggtttcagcacaccggctctagagacagatgtccaaccatccttt
ggaatgctcatttcctgcatcaatacatgcgttcaactcctcagtaagttggacagcagc
aagacttctctctctcctgatgagactccgcccaccattgtggccgtagctgggccatct
gcccccgtacagcacagatacatggatagacccatgatcatgtttttactggagacctct
gttgagctgctaatggtgcaagggttacgatgcctcaaggatcccacactgcccctccga
gatagacagagagtcaaacgggaattaggaactgaattagccaccttcctgcagagtctc
cagcggtacttccgtcgagggggtgggccctcctctcccagctcggccagtccctcctcc
tcctcatccggccttctccgcaccccttctgcctccatcctctccaagtcggccagccac
accctgttctcggaggcccccgagcaagccttcttccgcgtggtgcaatacttcatgcag
cagatcctgcggtag
DBGET
integrated database retrieval system
