Acanthaster planci (crown-of-thorns starfish): 110989668
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Entry
110989668 CDS
T05078
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110989668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110989668
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110989668
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110989668
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
110989668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCHC
Torus
zf-CCCH_2
zf-CCCH_3
zf-CCCH_12
zf-CCCH_4
zf-CCCH_RBM22
zf-CCHC_4
zf-C2H2_10
Lin-28A-like_zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
110989668
NCBI-ProteinID:
XP_022109909
UniProt:
A0A8B7ZWW7
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
METIVANVDCLRFDLETALEQQIGSQPLPFPGMDKSGAAVCQFYKQNSCSKGAMCPYRHV
GGEKSVVCKHWLRGLCKKGDECEFLHQYDMTKMPECFFFTKFGMCSNKECPFLHIDPESK
VKDCPWYDRGFCKHGPLCKNRHVRRVMCQNYLNGFCLEGPNCKFQHPKFDLPVLEAKDNI
KKIVCHNCKEVGHKAANCPKGSSAWVQQGRPSDRAIGVLGMVDTNAGGGTGQHLGQPHSN
GQPIRHFRSAENIKCFKCGELGHFANKCPKGYLAFLSNANSDQEQQPNRQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaaactatagttgcaaacgtggactgcttgcggtttgatttggagacggcgttggag
cagcaaataggatcacagccattacccttccctgggatggataaatcaggtgcagcggtg
tgtcagttctacaagcagaacagctgcagcaagggggcgatgtgtccctaccgccacgtt
gggggtgagaaaagcgtggtgtgcaaacactggctgagggggttgtgtaagaagggtgat
gagtgcgagttccttcaccagtacgacatgaccaaaatgcccgagtgtttcttcttcaca
aagtttggtatgtgtagcaacaaggaatgtccatttcttcacatcgacccggagagtaaa
gtcaaggattgcccgtggtatgacaggggattctgtaaacacggtccactgtgtaagaac
cgacacgtgcggcgggtgatgtgccagaattacctcaacggcttctgtctggagggacct
aactgtaaattccagcaccccaagtttgacctgccggtgttggaagccaaggataacatc
aagaagatcgtttgccacaactgcaaggaggtgggccacaaggcagccaactgtcccaag
ggatcgagtgcctgggtgcagcaaggcagaccatccgacagggccatcggcgtgctcggc
atggtggacacaaatgctggaggtgggacaggtcagcacctaggacaaccacacagcaat
ggccagcccatccggcacttccgtagcgcggaaaatatcaaatgcttcaagtgcggggag
ctcggccactttgccaacaaatgccccaagggatatctggcattccttagtaacgccaac
agtgaccaagagcaacagcccaacaggcagtag
DBGET
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