KEGG   Acanthaster planci (crown-of-thorns starfish): 110989727
Entry
110989727         CDS       T05078                                 
Name
(RefSeq) eukaryotic initiation factor 4A-III
  KO
K13025  ATP-dependent RNA helicase [EC:5.6.2.7]
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013  Nucleocytoplasmic transport
aplc03015  mRNA surveillance pathway
aplc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110989727
  09122 Translation
   03013 Nucleocytoplasmic transport
    110989727
   03015 mRNA surveillance pathway
    110989727
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aplc03019]
    110989727
   03041 Spliceosome [BR:aplc03041]
    110989727
   03009 Ribosome biogenesis [BR:aplc03009]
    110989727
   03012 Translation factors [BR:aplc03012]
    110989727
Enzymes [BR:aplc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110989727
Messenger RNA biogenesis [BR:aplc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110989727
   mRNA cycle factors
    Stress granule specific factors
     110989727
Spliceosome [BR:aplc03041]
 Complex C
  Other components
   EJC/TREX
    110989727
Ribosome biogenesis [BR:aplc03009]
 Eukaryotic type
  90S particles
   Helicases
    110989727
Translation factors [BR:aplc03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    110989727
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Cas3-like_C_2 AAA_22 AAA_30 UvrD-helicase TniB
Other DBs
NCBI-GeneID: 110989727
NCBI-ProteinID: XP_022109999
UniProt: A0A8B7ZX64
LinkDB
Position
Unknown
AA seq 400 aa
MASMRRVLSQEAATMRFETSESVDVTPTFDAMNLREDLLKGIYAYGFEKPSAIQQRAIKP
VVNGRDVIAQAQSGTGKTATFSVSVLQCLDTQVRETQALILSPTRELAVQIQKVILALGD
YMSVLCHACIGGTSIGEDIRKLDFGQHVVSGTPGRVFDMIKRRNLRTRSIKMLILDEADE
MLNKGFKEQIYDVYRYLPPATQVLLFSATLPHEILEMTTKFMTEPIRILVKRDELTLEGI
KQFFVAVDREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDM
PQKERDEIMKEFRAGATRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRY
GRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq 1203 nt   +upstreamnt  +downstreamnt
atggcgtccatgaggagagttctgtcccaagaagcggcaactatgcgcttcgagacaagt
gaaagtgttgatgtaacaccaacattcgatgcaatgaacttgcgggaagatcttttgaag
ggaatttatgcttacggttttgagaagccctcagccattcaacaaagagccatcaagcct
gtagtgaacggtcgtgatgtcattgcacaagcccagtctggtacagggaagactgccacg
ttctctgtctcagtcctgcagtgcttagacacccaggttcgagaaacacaagcactcatt
ttgtcgccgacccgtgaactggccgtacagattcagaaggtgatattggccctgggtgac
tacatgagtgtgctgtgccacgcctgcattggaggcacaagtattggtgaagacatccgc
aagctggactttggccaacacgtggtctcaggaacacccggcagagtctttgacatgata
aagagacgaaacctccgcactcgctccattaagatgctgatcctagatgaagcggacgaa
atgctcaacaaaggtttcaaggagcagatctacgacgtctaccgttacctccctcctgcc
acccaggtcctgctcttcagtgccacgctgcctcatgagatcttggagatgaccacaaag
ttcatgacagaacccatccgaattctggtcaagcgtgatgagttgacgttggaaggaatc
aagcagttctttgtcgccgtggaccgagaggagtggaagtttgacacgctgtgtgacctc
tacgacacactgaccatcacgcaagctgtcatcttttgcaatacaaagcgcaaggttgac
tggctgacagagaagatgagagaggccaacttcaccgtctcctcgatgcatggcgatatg
ccgcagaaggagagggacgaaatcatgaaagagttccgggctggagcgacgcgggtccta
ataaccacagacgtttgggcccgtggattggatgtgcaacaggtgtctctcgtcatcaat
tatgatctgccaaacaaccgtgagctttacatccatcggattggccgatcgggtcgttat
ggtcgtaagggtgttgccatcaactttgtcaagagtgatgacatccgtatcttgagggat
atcgagcagtactacagtacgcagattgacgaaatgcccatgaacgttgctgacttgatc
tga

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