Acanthaster planci (crown-of-thorns starfish): 110990520
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Entry
110990520 CDS
T05078
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110990520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110990520
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110990520
mRNA degradation factors
5'-3' decay
Decapping complex
110990520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WDR55
CENP-B_dimeris
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_EML_2
Beta-prop_HPS5
EIF3I
NBCH_WD40
DUF7557
Beta-prop_TEP1_C
Motif
Other DBs
NCBI-GeneID:
110990520
NCBI-ProteinID:
XP_022111257
UniProt:
A0A8B8A1M5
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
MDNSFNTSSSGSLSGSHHSDHANASQILKELLNVGKPMHQAYSSTSSMDGNAENNPDPQD
AISKDFIQAGGDSAAPLNLRDTVRQTIELVGNDQSGSVPVYGREVSVIPSEASKRDSRAP
GSSKVKITPVVKYDWEHKYYVGNLVAVNQIYLVYVLKIQSGYGLRILDRRTSVRALLKGF
EDIITDVAFAHHQSNVLGCIDRLGNMTVWQILDVDGKIAPNSKLKVMRPPGTHPTDYHRL
VWCPYLPDDPTASDSSSISDENSRLLAVTHEERAEFWDLDVVIELFGNVVNADSVTDGVI
RICSGHTKPITDLSVAPDGQVLATASEDGTVKFWQMDMAAPDQAPARLHRFSPHDGRPLS
SLIFCDNHKYQDPDLPFWRFLITGACANRELMMWCTVTWTCLQKISFTRPGLLPEPFLKI
KLDLSASFLIATDITRKVLYVLQVHQDHSEGHAHMSSITEFLLTQPTLSFAIVDAGKCRL
KPLLEEGEEGEELNSGEMLEMLQGDMEPSHFPNSGVLVKMFCINSTSVQDLQVRFQPNSS
VEHGNMAGSVSSASQDDYALQDGLSDMSMNDTDRSAGTDVDRVSAVRQASSLTPGGSLTS
SFTSESTNPSTSPGQPYLMTPEAIKSSSAKTLAEHLRESNSSASSFTQVSALNTSADDLL
TGSHHSGENSTPTPRTLTPVSSLPATPKSPQRPDRSATPPQVDAALAREKDEDGSAEDDE
GPKSPPPTPTELASPELIARSAASTDDLVELLENARMKEKRISDSSAEVAHILQGHLGQD
GDQEAEVEDDQGREDEEDEKEDDDVESKAIPVTVDSIAFADAVKQLVDPVQVTQPPSSLI
EMHGEDASGVTQGREVVVISPKQEKLGVTASEEAPGGEGIPTPTQGEEGETAETPQSGDE
SREQQVGGAMAPVPQQLLEVQEQESRSEHSSDVEPADSTSPPGSKSKAKKQRRDKYSRSS
PRPRKSLPTEADARLDMPEINNTLQQVLNLLQSQQQELKQMKQDIAKSQPANSIIQSMRS
RIDKLDKSLCTKLETSMAKQSEQERQRLNTAMQERQSLDKQKQERLLECVSQNLNKSVNS
RLDKTVRTEIENKVVPEIGKLIAPMSEQLSTVVSQKLTATDQLMRENIGKLVRSKSTTEA
LGQSAANALSNTIQTTYREAFRTSVVPAFEQSCQSLFMQVNTAFEAGTRQYTQQLESHLN
KQRQQERESRDPIVAELVSLAEEFKASSQTLKESILSSVNDEVEKQLQKANEKLEEDLLG
KVRKLLKEELQNALRDHQSRVESSITAAVVRSQAPTPVPQGPDIRQVQSQITQLLQQGHI
IQAFQSALSASDLRAVLFVCNAVNPDQLFGGQCPLDQPVLLSLIQQLSHDIGTNTKLKLR
YIDEALLVLDEDKTTTQYSEHLPIVIGDLCKHITAFLQQHPSHPSTKQMKRVLALANSLM
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggataactctttcaatactagctctagtggctcactgagcggcagtcaccacagtgat
cacgccaatgcttctcagatattaaaagagctccttaacgtggggaaacctatgcatcaa
gcttacagttcaaccagcagcatggacgggaatgctgaaaataatccagatccacaggat
gcaatatccaaggattttatccaggcaggaggtgactctgcagctcccttgaatttaaga
gacactgtccggcaaaccattgagctggttggaaatgaccagagtgggtcggtgccagtg
tatggccgtgaggtcagtgtcattcccagcgaagcctccaagagggacagccgagcacca
gggagtagcaaagtcaaaatcacaccagtggtgaaatatgactgggaacacaaatactac
gtgggcaaccttgtggcagtcaaccaaatctatctggtgtacgttctgaaaattcagagt
gggtatggattgcgcatactggacaggcgcacctctgtgagggcgctgttgaaaggcttt
gaggacatcatcacagatgtcgcctttgcccaccaccagtccaatgttctgggctgtatc
gacaggctggggaacatgactgtctggcaaattctcgatgtggacggcaaaatcgcgccc
aattcaaagctaaaggtgatgcgaccgcccggcacacaccccaccgactaccaccggcta
gtctggtgcccctacctgcctgacgaccccaccgctagtgacagcagctccatcagtgac
gagaacagccgtctactggctgtcacccacgaagagagggctgagttttgggatttggat
gttgtgatagaactgtttggcaacgttgtgaatgcagacagcgtaacggatggtgtcatt
cgaatttgcagtggacacacaaagcccatcaccgatctgtctgtagcccctgacgggcag
gtccttgccacggccagtgaggatggcacggtgaagttctggcagatggacatggctgcc
ccggaccaggctcctgcacgtctgcaccgattctccccccacgatggccggccactgtcc
tcattgatcttctgtgacaaccacaagtaccaggacccagacctccccttctggaggttc
ctgatcacgggggcctgcgccaatcgtgagctgatgatgtggtgcaccgtcacctggacc
tgcctgcagaagatcagcttcacccggcccggcctcctccccgaacccttcctgaagatc
aagctggacctgtcggccagcttcctgatcgcgacagacatcactagaaaggtcctgtat
gtccttcaggtacaccaggaccacagtgaaggccatgcccacatgagttccatcaccgag
tttctgctgacccagcccaccctcagcttcgccatcgtggacgcgggcaaatgccgcctg
aagccactccttgaggagggggaagagggggaggagctcaactcaggtgagatgctggag
atgttgcagggggacatggaacccagtcattttccaaacagcggtgtgctcgtcaagatg
ttctgcatcaattcaacatcggtgcaagatctacaggttcgctttcagcccaactcttcc
gtggaacatggcaacatggccggctcagtcagttcagcctcgcaggatgactatgccctg
caggatggtctgtcagacatgagcatgaacgacaccgaccgctcagctgggacagatgtg
gatagggtctcggctgtccgccaggccagctcactgacccccggcgggtccttgaccagc
tccttcacgtccgagtccaccaatccatcaacctcgccaggccagccctacctaatgaca
cctgaagccattaaatctagcagtgccaagaccttggccgaacacctgcgggagagcaac
tctagtgccagcagcttcacccaggtctcggccctgaatacctcggccgacgacctcctg
acaggctcccaccactctggggagaacagcactccgacccccaggaccctcaccccagtc
tctagcctcccggccacacctaagtcgcctcagaggcctgaccgctcagccactccaccc
caagtagatgctgctcttgcccgggagaaggatgaagacggttcagcggaggacgacgaa
ggacccaaatcccctcccccgaccccaactgaactggcttcccccgagctgattgctcgg
tccgcggccagcacggatgacttggtggaactcctggagaatgcacggatgaaggagaag
cggatctcggactcaagtgcggaggtggcgcatatcctccaagggcatcttgggcaagac
ggagatcaggaggcagaagtggaagacgaccaggggagagaagacgaagaagatgagaaa
gaagacgatgatgtggagtccaaggctatccccgtcactgtggattccatcgcatttgca
gatgcagtgaaacagttggttgacccagtgcaggtgactcaacctcccagcagcctgatt
gagatgcatggagaggatgccagtggagtgacccaagggagggaggtggttgtcatcagc
cccaagcaagaaaagctgggagtcacagcctccgaggaggccccaggtggtgagggaata
cccaccccgacccagggggaagagggggagacagctgagaccccacagtcaggggacgag
agcagggagcagcaagttggaggagccatggccccagtgcctcagcagctcctggaggtt
caagagcaggagtcgcgcagtgagcacagctctgatgtggaaccggcggactccacttct
ccccctgggtccaagagtaaagccaagaagcagaggcgggacaagtatagccggtcctcc
ccacgacccaggaagtccctgccaactgaggcggatgccaggctggacatgccagagatt
aataacacgctgcagcaggtgctaaacctgctgcagtcgcagcagcaggagctgaagcag
atgaagcaggacattgccaagtcgcagccggccaacagcatcattcagtccatgcggtcg
cgcatcgacaagctggacaagagcctgtgtaccaagctggagaccagcatggccaaacag
tcggagcaggagcgtcagagattaaacactgccatgcaggagaggcagtcattggacaag
cagaagcaggagcgtctgctggagtgcgtctctcagaatctcaacaaatcagtcaacagt
cgtctggacaagacagtgcgcactgagattgagaacaaggtggtgccagaaataggaaag
ctgattgcaccaatgagcgagcagctgagtactgtcgtttcccagaaactcactgccaca
gaccagctgatgagggagaacatcggcaagctagtcagatccaagagtaccacagaggcc
ctggggcagtcggccgccaatgcactgagcaacacaatccagacaacataccgggaagcc
ttcaggacaagcgtggtgccagcctttgagcagtcctgccagtccctcttcatgcaagtc
aacacagcctttgaggctggaaccagacaatacactcaacaattggagtcacacctcaac
aagcagagacagcaggagcgggaatcccgagaccccatcgtggctgagcttgtatccctc
gcggaggagttcaaggccagctcccagacactcaaggagagcatcctcagcagtgtgaat
gatgaggtcgagaaacaactccagaaggccaatgagaagcttgaggaggacctcttgggc
aaggtacgcaagctcctgaaagaggagctgcagaacgccctgcgcgaccaccagagccgg
gtggagagcagtatcacagcggccgttgtgcgctcccaagctcctaccccagtgccccag
ggcccagacatccggcaggtccagagccagatcacccaattgctgcagcagggccacatc
attcaagccttccagagcgctctgagtgcctcagacctacgtgctgttctcttcgtatgc
aatgccgtcaatcctgaccagctgtttggtggccagtgcccgctggaccaacctgtcctc
ctctcactcattcaacagctgtcccatgacattggcaccaacaccaagctcaagctgcga
tacatcgacgaggcactattggttcttgatgaggacaagaccactacccagtacagcgaa
catttgcccatcgtcattggcgatctctgcaaacacatcaccgccttcctgcagcagcac
cctagccaccccagcaccaaacagatgaaacgtgtgcttgcgcttgccaacagcctgatg
taa
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integrated database retrieval system
