Acanthaster planci (crown-of-thorns starfish): 110991239
Help
Entry
110991239 CDS
T05078
Name
(RefSeq) protein CASC3-like isoform X1
KO
K14323
protein CASC3
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013
Nucleocytoplasmic transport
aplc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110991239
03015 mRNA surveillance pathway
110991239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110991239
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
110991239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
110991239
NCBI-ProteinID:
XP_022112227
UniProt:
A0A8B8A4B3
LinkDB
All DBs
Position
Unknown
AA seq
827 aa
AA seq
DB search
MADTRRRREPRRRQDDIGAAETEEDGENVSVQSDAESHSDAESDTIFDKEEGETDEYESA
EEAQEEGGEPPNDSDEEDKSQPDVGEGDAEGGNENENVNDEENQADEAAEEETDGDKRLD
ADEDLKNPAYIPRRGPYFMHDVRSMDNKEEDKEKDRGSKEKKLWKEDNKWLHDKYFEAEQ
APKPRAEMVSIYGYDIRSSNEPPKTGQSRQPSRRAPRGRSRGRQRYNLQESFNNQKQPNK
EDGYSRKRQPAQRSEPAQEDWNDENEPPAPTETIGRQDSYQGQSNGEESNRTYDHERPWS
GRTRGRGRGRRGRGQGRESYDHSRNAVEPATIPHKTEWVNSNSGPSRREQVAGQRRDWHH
RLPEADRQRQQQQRVPLQEDFPALGASQLSRKQEPARLASRETVAPQWGRKDRREQVRES
GEGDWAKAVAKTGRQNVGGETKERSSEGGSLPAKSQGLLPTPSSTEGRTESPEDSNQSAD
RMQADKREPLKPKRYSSQRQRQAADAPPISQASAVVQPPKFYQGEATGPPPGYSHTPPAT
SSPQHMGGGGGRGSSGGGGTPPHTLQSTAPSVHGGATPPGMGVAPSTQAPPTVMQGGVMP
QGIILPGDVPIHPGMRHPSPTHIANPPIIHPVAMRTQQPLPQPGFPPRAHFMVNYGASPG
QQYQLNSPPVGMQRFPQDAVPNITPHSQPPPLQPGPIPTLPQPNQSLPLQVPTMLSQQPP
TPVQPLPQGDGGGGSLPAPGLGQPPPSQTYGGVTYYSPEQQQQGVKRVQAKRPVNPIRIE
EPPQRSKRLEQTQENQEDTMLQQQQQDPPQQQQHQHLQPQVVDSQTT
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcggacactcgacgacgccgtgagccacgacgccgccaagacgacattggggctgct
gaaacagaggaagatggcgaaaatgtatctgttcagagcgacgcagaatctcactcagat
gccgagagcgacaccatatttgataaagaagagggagaaaccgatgaatatgagagtgca
gaggaggcacaagaggagggtggtgaacctccaaatgactctgatgaagaggacaagagc
caaccggatgtcggggagggggatgctgaaggaggcaatgagaacgagaacgtcaatgat
gaggaaaatcaggcggatgaggctgcagaggaagagaccgatggcgacaagagactggat
gctgatgaggacttgaagaaccctgcctacatcccaagacgcggcccttacttcatgcat
gacgtccggtccatggacaataaggaagaagacaaggagaaagacagaggcagtaaggag
aaaaaattatggaaagaagacaacaaatggttgcatgacaaatactttgaggcagaacag
gctcccaagccgcgggcagaaatggtgagcatctatggctatgacatccggagctccaat
gaaccacccaagactggacagtcaagacagccaagtaggagagctccgagaggccgaagt
cgaggtcgtcaaagatacaaccttcaagaaagcttcaataaccaaaaacagcctaacaag
gaagatggttacagtcgtaagagacagccggctcagagaagcgagccagcccaagaggac
tggaacgatgaaaatgaacctcccgctccgacggagaccatcggaagacaagacagttat
cagggacagagcaatggggaagagtccaataggacttatgatcatgagcgaccctggtct
gggaggacaagaggccgagggaggggtcgcaggggccgaggccaagggcgggagagttac
gaccacagccgcaatgcagtcgagcctgcgacgataccgcacaagacagaatgggtcaac
agcaactctggtcccagcaggagagagcaggtggcgggacagaggagagactggcatcac
cggcttcccgaggctgaccggcagcggcagcagcagcagcgagtgccccttcaggaggac
ttcccggccctgggggcttctcagctgtcccgcaagcaggaaccagcccggctggcaagc
agggagactgtagccccccagtggggcagaaaggacagacgagagcaggtccgggagagc
ggggaaggagactgggccaaggctgtggccaagacaggcaggcagaacgtgggtggggag
acgaaggagaggtcatcagaaggtggttcactacctgccaagtcacagggtctgctgcct
accccttcctcaacagaaggcaggacagagtcacccgaagacagcaaccagtcagcagac
agaatgcaagctgacaagagagagcccttgaagcctaagcgttactcctctcaacggcag
cgtcaagcagctgatgccccgcccattagccaggcctcggctgtagtgcagccacccaag
ttttaccagggcgaggccacaggcccgccccctggctacagtcataccccaccggccact
agctcgccacagcacatgggtgggggcggtggcaggggtagtagtggtgggggtggcaca
ccacctcacacactgcagagcacagcgccgtccgtgcatgggggagccacgcccccagga
atgggcgttgccccctctactcaggccccacccaccgtgatgcaagggggcgtgatgcca
caggggataatcctgccaggagatgtgcccatacatccaggcatgcgacacccctcgccg
actcacatagccaatcctcctatcatccacccggtagcgatgaggacacaacagcccctc
ccccagcctggctttccaccacgtgcccatttcatggtcaactacggagcctcacctggc
cagcagtaccagctcaacagcccccccgttgggatgcagcggttcccccaagatgctgta
ccaaacataacgccccactcccagcctcctccattacagcctggccccattcccaccttg
ccccagcccaaccaatccctgcccctccaggtgcccaccatgctttcccagcagcccccc
accccggtgcagcccctaccccagggggatggtggtggggggtccctgccagccccgggg
ttgggtcagcccccgccatcacagacctacggtggggtgacctattactcccctgagcag
cagcagcaaggtgtgaagcgagtacaggccaagaggccagtcaacccaatccgcatcgag
gagcctccacagcgatcaaagcgactagagcagacccaagagaatcaagaggacaccatg
ctacaacagcagcagcaagatccaccacaacagcagcaacatcagcacctgcagccgcaa
gtagtagacagccagactacgtag
DBGET
integrated database retrieval system
