Agrilus planipennis (emerald ash borer): 108732340
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Entry
108732340 CDS
T07419
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apln03009
]
108732340
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108732340
Ribosome biogenesis [BR:
apln03009
]
Eukaryotic type
Pre-60S particles
Helicases
108732340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
FtsX_ECD
Motif
Other DBs
NCBI-GeneID:
108732340
NCBI-ProteinID:
XP_018318591
UniProt:
A0A1W4W348
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MKSRKPWEEIYPLLDEDIKKAIKTFNFPTMTPVQAATVPLLIAMKDVAVQAVTGSGKTLA
FLIPMLQLLKRRAKEQVWKVKEVGSIIISPTRELAVQTNTVLTQLLEHLPQFKQCLLVGG
NSIEEDVKKLREGCNILVSTPGRLEDLLTRKLDFNLPASVKSLELLILDEADKLLDLGFT
ASLNTILSYLPRQRRTGLFSATQTKELQDLIRAGLRNPVVITVTEKASQSTPVTLDNYYI
VTRNDGKLGTLVSFLEENSIRKALLFFPTCATVEYFSIVLKHILPQKLSPVLAIHGKMKE
KRQKILDKFRNSSSGILLCTDVMARGIDIPEVDWVLQWDPPTSASAFVHRVGRTARQGNQ
GSSLIFLLENEEPYVEFIKLNQNVYLKQLSDSATTEKIADIREKLRSLQKIDRATMEKAT
RAFVSHVRAYSKHECSLILKVKDWPLGSVAAMYGLIRLPKMPELKNQDLSDFPQVEDFDF
DSVPYKDKQKEEQRQKKLESYKSTGVWPGKQIKIRKKPTEPWSKTKQMKEERKIKRQKRK
NTKQMKIANNQPLKKKKRKGISEEDMEELAKDIALIKKLKKRKITDEQFDKEMGLCE
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaagaaaaccatgggaagaaatttaccccttgctagatgaagacattaaaaag
gccattaagacgtttaattttccaactatgactcctgtacaagctgcaacagtgcctcta
cttattgcaatgaaagatgtagctgtccaggcagtaacaggatctggaaagactttggca
tttttaatcccgatgttacaacttttaaaaagaagagctaaagagcaagtttggaaagta
aaagaagttggaagtattataatttcaccaactcgagaattagctgtccaaaccaacact
gtcttgacacagttacttgaacatttacctcaatttaagcaatgcttattagtcggtggt
aacagcatagaagaagatgttaaaaaattaagagagggttgtaatatattagtttctact
ccagggagattagaagatttattaacaagaaaattagactttaatttaccagcctcagtt
aaaagtctggagttgttaattcttgatgaagcagataaattattggatttaggatttaca
gcatctttaaatactattctcagttatcttcctagacagaggcgaacgggtttgttttct
gcaacccaaacaaaagaattacaggatctaattagggctggacttagaaatccagttgtg
ataaccgtcacagaaaaagcatctcaaagtacacctgttactcttgataattactatatt
gttactagaaatgatggaaaactaggtacgcttgtgtcctttttggaagaaaattctata
aggaaggctcttctgttttttcccacttgcgccaccgtagaatacttttctattgttctt
aaacacattcttccccaaaaattgtcacctgtattagcaatacatggtaaaatgaaagaa
aaaaggcaaaagattttagacaaatttcggaattcatcgtcagggattttattatgcacc
gacgtaatggcgagaggaatcgacatacctgaagttgactgggtattgcagtgggatccc
cccacaagtgccagtgctttcgttcacagggttggcaggactgcgcgtcaaggaaatcag
ggctcttccttgatcttcctcttagaaaatgaagagccctatgtagaatttattaagctc
aatcaaaatgtttatcttaaacaattatcagatagcgctacaacagaaaagattgcagat
attagagagaagctacgttccttacaaaaaattgatagagcaactatggagaaggcgaca
agggcttttgtgtcgcatgtaagggcttattcaaaacacgaatgttctttaattttaaaa
gttaaggattggcccttaggttcagtagcagcaatgtacggacttattcgtttaccaaaa
atgcccgaattaaaaaatcaagacttgtcggactttccgcaagtcgaagatttcgatttc
gattcagttccttacaaggataaacaaaaggaggagcaaaggcagaaaaaattggaaagt
tataaaagcactggtgtttggccaggtaaacaaattaaaatccgcaaaaaacccaccgag
ccttggtcaaaaaccaaacaaatgaaagaagaaagaaaaattaaaaggcaaaaaagaaaa
aacacaaaacaaatgaaaatagcaaataatcaaccattaaagaaaaaaaaacgaaaaggt
atcagtgaagaagatatggaagaacttgcaaaggatattgctcttataaaaaaattgaaa
aaaagaaaaataacagatgagcaatttgacaaagaaatggggctctgtgagtaa
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