Agrilus planipennis (emerald ash borer): 108732415
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Entry
108732415 CDS
T07419
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X1
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apln03041
]
108732415
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108732415
Spliceosome [BR:
apln03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
108732415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108732415
NCBI-ProteinID:
XP_018318706
UniProt:
A0A1W4W3G7
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MDTEVEEIFKNENENPLKFDNIFLTKSLLNALKDSSFQKLSPLQHTSLPLGISGFDLIIK
DHPGKGRFVLYAILALELIKIGSNHAQVLILACKEEIRMIKEVMINLGQYLEGLKVSTYD
EETQDYENIFDCHIAIASTNKIRSFIDSGTLPTDNISLIILDNSDKLMNFDYILFEELFK
LLPSKKQIISLASVYSVDLEEFLKKYMNHPLEISHEIESSVLLGFSHFVCTINQPQDNAG
SITEAKTMQLCSILSKISFTRCIIYTNNESRGVYISKTLQDKGWNSFYAPFFINDSEITK
KIKKSKCLISTTCLDMRKFQCDVNLIINYDIPMCSAAYIERIGKVVNKTKGIYINMILPG
EELDRFEQILGDIGGPEMSVPIIDINDSFFEDIWNVETNSLDHICGITNMGSQPKTDQKL
KKLVSDIIKYRLEQCEEDSVASKLKNLSVAHKSHINITNDNAKSLELKNYLEELASGKDS
AKPSNENNSTSTNDDQNSKKLPELKTLLEIFTSEINFEEKQLDNKEEMKNTSMNNLLQNL
ALGNMKQQDDALHISNKNDDDILIRNVALLNVAKLITNSDNLQEEKISKDITQPLNGYLN
YLKKTEVSSISIESDSEVSVSNEQNYANSHKKEEDNNFHLKDIFKIGYDFLIKPISSLKT
TGESRNGLETQPSKCKELMSEVVDNKPDQFDQFNDLNLQLVNENKIPAKADKRKTRSQKN
KNRNSKRSKFCEEYADNENNDVQRELTACKEESLTIQESVEVNEEIYTLSDTRNSINQVA
ESYFDYYSNILWNDGLTFDDVSSFDNWFAQWQAQVHCVREYVQQRIYLDEMNALQQNQ
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggatacggaagtagaagaaatatttaaaaatgaaaatgaaaatccattaaaattcgac
aatattttcttaacaaaatcattgttaaatgcccttaaagactctagctttcaaaagcta
tcaccacttcagcatacctctttaccattaggaataagtggatttgatttaattattaaa
gatcacccaggaaaaggaagatttgtattatatgctatacttgctttagagttaattaaa
ataggttcaaatcatgctcaggttctaatcttagcttgtaaagaagaaatacgcatgata
aaagaagttatgattaatttgggacaatatttagaaggtttaaaagtttctacatatgat
gaagaaacacaagattatgaaaatattttcgattgtcacatagcaatagctagtactaat
aaaataagaagtttcattgactcaggaacattaccaacagataatattagtttgataatt
ttggataatagtgataaacttatgaattttgattatatactttttgaagaacttttcaaa
ttacttcctagtaaaaagcaaattatttcacttgcttcagtatattcagtggatttagaa
gaatttctcaaaaaatatatgaatcatccattagaaataagtcatgagattgaatcttct
gtactgttgggatttagtcactttgtttgtactataaatcaaccacaagataatgctggg
tcaataacagaagcaaaaactatgcaactgtgcagtattttatcaaaaatttcatttact
cgttgtatcatttacactaataacgaaagcagaggggtatatataagtaaaacccttcaa
gataaaggctggaattctttctatgctcccttctttataaatgattctgagataacaaag
aaaattaaaaaatccaaatgtttgattagcacaacgtgtttggatatgagaaagtttcaa
tgtgatgttaatttaataattaattatgatattccaatgtgcagtgcagcttatattgaa
agaataggaaaagtagtaaataaaacaaaaggaatttatatcaatatgatcttgcctggt
gaagagttagataggtttgaacaaatattgggagatattgggggcccagaaatgtctgta
ccaataatagatattaatgatagtttttttgaagatatatggaatgttgaaactaatagt
ttggatcacatctgtggaattacaaatatgggatctcaaccgaaaactgaccaaaaatta
aaaaaacttgtctctgatattataaaatatagacttgaacaatgtgaagaagacagtgta
gcaagtaaattgaagaatttaagtgttgcccataaaagtcatattaatatcacaaatgat
aatgcaaaatcattagaactaaagaattatcttgaagagttggcctctggaaaagactct
gctaaaccaagcaacgaaaacaacagtacttcaaccaatgatgatcaaaatagtaagaaa
ttacctgaattaaaaacattacttgaaatttttacatcagaaattaactttgaagaaaaa
caattagataataaagaagaaatgaaaaatacaagtatgaacaatttattacaaaattta
gctttgggaaacatgaaacaacaagatgatgcattacatattagcaacaaaaatgatgat
gacattttaatacgaaatgtagcacttttgaatgttgcaaaattgattacaaattctgat
aatctgcaagaagaaaaaatttcaaaggatattacgcaaccacttaacggctacttaaat
tatttaaagaaaaccgaagtatcgtctataagcatagaatctgactcagaagtttcagtt
tctaatgagcaaaattatgcaaacagtcataaaaaagaagaagataataactttcactta
aaagatatttttaaaattggttacgatttcctaattaaaccaatttcttccctgaaaacc
actggtgaatccagaaatggcttagaaacgcaaccttcaaaatgcaaagaactcatgtca
gaagtagtcgataataaaccagatcagtttgaccaatttaatgatttaaacttacaatta
gtaaatgaaaataaaattcctgctaaagcagacaagagaaaaacaaggtcacagaaaaat
aaaaatagaaactcaaaaagaagtaaattttgtgaagaatacgctgacaatgaaaataat
gacgttcaacgagaattaactgcatgtaaagaagaaagcttaacaatacaggagagtgtg
gaagtcaatgaagaaatttatacattatcagatacaagaaattccattaaccaagtagcc
gagtcatattttgattattacagtaacattctgtggaatgatggattaactttcgatgat
gtttctagttttgataattggtttgcacaatggcaagctcaagtacattgtgtaagagaa
tatgttcagcaaagaatataccttgatgaaatgaatgcattacaacaaaatcaataa
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