Agrilus planipennis (emerald ash borer): 108732640
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Entry
108732640 CDS
T07419
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln04140
Autophagy - animal
apln04142
Lysosome biogenesis
apln04145
Phagocytosis
apln04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
108732640
04142 Lysosome biogenesis
108732640
04140 Autophagy - animal
108732640
04148 Efferocytosis
108732640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
apln04131
]
108732640
Membrane trafficking [BR:
apln04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
108732640
Hops complex
108732640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
VPS18_solenoid_2nd
VPS18_solenoid_1st
VPS18_RING_C
Clathrin
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3H2C3
zf-RING_Vps41
zf_RING_Vps8_fungal
zf-RING_2
zf-RING_11
Nup54_57_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
108732640
NCBI-ProteinID:
XP_018319046
UniProt:
A0A1W4W4G7
LinkDB
All DBs
Position
Unknown
AA seq
993 aa
AA seq
DB search
MTSMFDQFEQASQKLDSNNDLTDISSGYINMKMEKELPIFTKSKMCFNPSAKITHVAISN
KNLAVAMANGMLFRMNIHQPEQQNEISLHKYTALCPLTNLFLDPSGNHLLISFGSKSPEL
LYLSRKSVKLKVSTKFKGHEITEVAWNNLNESESTTGPILLGTSKGLIFETEIALDGDKF
LTSGFSSSIEQYWRQIPNYLPIYGNKEVDGLVFDIGKGTDTPITGLHFDRITGTDKYFIF
VATPNKLYFFARNINCEEKPLLQQVFNKYLNIPEKDTFYKVESKLRYSRLRFWSENLTVP
DSLAWMTEGEILYSKFDLPTQENINSILANAETILFPKPLYQDYSVSQKPPIACVLTEFH
VLLAYTDAIKGISLLNRDVVYEDNYNEAFGKLINIIKDPMTGTIWAVTENAVFRFKITKE
ERNIWQIYCEKQQFDLAKKYSRQNPVHYDQVLKKEADMLFEKKVYEASAQRYAETQTSFE
EVCLKFIQVDQKNALKIFLKKKMERLSPQDKTQITLIVIWVVELYLDQLEEMRITGKEQT
ATYFDLQKEFQAFLALPQVSDCIKNNKSTIYDLMASHGDKTNLIQLTIVNKDFEKLIRQH
IYKNNFHEALDVLKSQNNRELFYQFAPILMQEIPKFTVKALIDKGAHLSPVKLLPALVSC
DSEEHSREIVKYLEFCVGKLKCSEKAIHNLLLTLFAKYDPQKLMEYLNSQGQDIGMVNYD
VHFALRLCTEKKLTAACVQLSGLLGLWETAVDQALTINVELAKQIANMPSQEDEELRKKL
WLKIAQHVVSGKDNIEQAMEFIQQCELLKIEDILPFFSDFVTIDHFRDAICKSLKDYNQQ
IQALKDEMREATQSSELVRKEIQSFRNSFTYVSSSDVCEVCNLTLMIRPFYLFPCRHKFH
NDCLLKELNPMLGPIKKNKLADLHRQLNAVGTLSAQSDNISTCSGLSTREAIKADIDSIV
ASECLYCGENMIRNIDMPFIDESDYEKIMKDWE
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgacttctatgttcgatcaatttgaacaagcatctcaaaaactagattctaacaacgat
ttaacagatatatcatctggttatattaatatgaaaatggagaaggaacttcctattttt
acgaagagtaagatgtgctttaatccatcagcgaaaataacacatgtcgctataagtaat
aaaaacctggcagttgctatggcaaatggtatgctctttcgaatgaacattcaccaacca
gagcaacaaaatgaaatttcattacataaatatactgctttgtgcccattgacaaatttg
tttcttgatcccagtggtaatcatttgctaattagttttggctcaaaatcaccggagtta
ctttatttatcaaggaaatcagtaaaattaaaggtctctacaaaattcaaagggcatgag
attacagaagttgcatggaataatcttaatgaaagtgaatcaacaactggtcccatttta
ttaggtacatcaaaaggactaatttttgagacagaaattgccttggatggagacaagttt
ctcacaagtggattttcttcaagtattgaacagtattggaggcagattccaaattattta
cccatttatggaaataaagaagtagatggtttggtgtttgatattggcaaaggcacagat
actccaataactggtttacatttcgatcgaataacagggaccgataaatattttattttt
gttgctactccaaacaagttgtacttcttcgcaagaaacattaattgtgaagaaaagcca
cttttgcaacaagtgtttaacaaatatttaaacattccagaaaaagataccttttacaaa
gttgaaagcaaactgagatattctagactacgattctggtctgaaaatcttactgttcca
gactcactagcctggatgacagaaggcgaaattttgtatagcaaatttgaccttcctact
caagaaaatattaattcaattttggccaatgcagaaacaattctatttcctaaaccgtta
tatcaagattattcagtgtcccaaaagcctccgattgcttgtgttttaacagagtttcat
gtacttcttgcatacactgatgctataaaaggaatttcgttacttaacagagacgttgta
tatgaagacaattataacgaagcttttggaaagctgatcaatatcataaaggaccctatg
acagggaccatttgggcagttactgaaaacgccgttttccgtttcaaaataactaaagaa
gaacgtaacatttggcaaatttattgtgaaaaacagcagtttgatctggcaaagaaatat
tcacgtcaaaatccggtacactacgaccaagttcttaaaaaggaagccgacatgcttttc
gagaaaaaagtctacgaggcaagcgctcagaggtacgcagaaacgcaaaccagtttcgaa
gaagtctgccttaagttcatccaagtcgatcaaaaaaacgcactcaaaattttcctaaag
aaaaagatggaaagattaagtcctcaggataaaacccagatcacgttgatcgttatttgg
gttgtggagttatacttggatcaattggaagaaatgaggatcacgggcaaagaacagact
gcaacgtattttgacctgcagaaggagtttcaggcgtttctcgctcttcctcaagtgtca
gattgcattaaaaataacaagtcaacgatatacgatctcatggctagtcatggagacaaa
actaatctcatacaacttactattgttaataaagattttgagaagttaattcgacaacat
atctacaaaaacaatttccatgaagcactggacgtgctaaaaagccaaaataacagagaa
ttgttttatcaattcgctcctattttgatgcaagaaatcccgaaatttaccgtgaaagct
ttgatcgacaaaggtgctcatttaagtcccgtaaagctgttaccagccctcgtaagctgc
gatagcgaggagcactctcgagagattgtaaaatatctcgagttttgcgtaggcaaattg
aaatgttcagaaaaggccattcacaatcttttgctcaccctatttgctaaatatgatcca
caaaaacttatggaatatttgaattcacaaggacaagatatcggcatggtaaactatgat
gtacattttgctttaagattatgtacagaaaagaaattaaccgctgcctgtgtacaattg
tctggattattaggactttgggaaactgctgtagatcaagctttaactataaatgttgaa
ttagcgaagcaaattgctaatatgccttctcaagaagatgaagaacttcgaaagaaattg
tggctcaagatagcacaacatgtagtaagtggcaaagataatattgaacaagccatggaa
tttattcaacagtgtgaattattgaaaattgaagacatcctcccgtttttctctgatttt
gtcacaatcgatcatttcagggatgccatatgtaaatccctaaaggattacaatcagcaa
atacaagccttaaaagatgaaatgagagaagcaacacagtcatctgaattggttcgaaag
gaaatacaatcatttagaaatagctttacttatgtgagcagttcagatgtttgcgaagtc
tgcaacttgactcttatgatcaggcccttttatttgttcccatgcagacataagtttcat
aacgattgtcttctcaaagagctgaatcctatgctagggcccattaagaaaaataaatta
gcagatcttcacaggcaattgaacgctgttggcacattatcagcacaatctgataacatt
agcacatgctcaggcctgtctacaagggaggcaatcaaagcagatatcgacagtattgta
gcttccgaatgcttatactgtggcgaaaatatgataagaaacatcgatatgccttttatt
gatgaaagtgattatgaaaaaattatgaaagactgggaatag
DBGET
integrated database retrieval system
