Agrilus planipennis (emerald ash borer): 108732837
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Entry
108732837 CDS
T07419
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03008
Ribosome biogenesis in eukaryotes
apln03013
Nucleocytoplasmic transport
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108732837
03015 mRNA surveillance pathway
108732837
03008 Ribosome biogenesis in eukaryotes
108732837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108732837
03009 Ribosome biogenesis [BR:
apln03009
]
108732837
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108732837
mRNA cycle factors
Stress granule specific factors
108732837
Ribosome biogenesis [BR:
apln03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108732837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
Tap-RNA_bind
LRR_4
NTF2
LRR_8
LRR_9
UBA_8
Motif
Other DBs
NCBI-GeneID:
108732837
NCBI-ProteinID:
XP_018319322
UniProt:
A0A1W4WFT6
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MPKPGKSSKGNHQHFTSWKNQYREHDDRGDRRVTFKHSKHGRKNNRNWSASLEAHFQEED
VDMGGSGGGFTSAKNFRRKGRSGTPPPKGAKRKLLDSPVGWFRVTIPYGHKYEKNFILKL
LMDHVSPLTLYPVMWTSERNVVTFYVDEYKVAEKLNNLDRQIRYPDGFNMIIKVNTGSPN
VVDINESMKEKMKLAMAKRYNAATRALDLTKFHADPDLQDVFCALFKPIILLTAIDIISV
NIPDLEALNLYDNRIHVLSHLKKLNTKLPNLKILHIGNNKIKDISMLDALSGLPLVDVVL
DGNPLCDKYKNQETYISEVRKRFPKVMKLDGVDLPPPISFDISEEVPLPTSQQTFLCNAE
GQGIVRQFLEQYIQIFDGETRQPLLQAYHEQATLSMTMAYPYGQHQKNSSWLNWYLTDNR
NILRVTDSDRRMRLLKQGHLAVVSFLNDMPATKHDIHSFTVDLCLFTPQLINLTFTGLYK
ELHSGHKMPPIRYFCRTFVIIPAGSGFCILNEMLHVTNATEEQRKIAFRTPAPAPPVQTP
APPNTPVTTPPSTSIPDDAVKQQMVQAMAQQSGMNLDWSQKCLQETDWNFERAVFVFTEL
QKQGTVPPEAFVK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagccaggcaagtcgtcgaaagggaaccatcagcactttacatcatggaaaaac
cagtacagagaacatgacgatagaggagacagaagggtcactttcaaacatagtaaacat
ggcagaaagaataatcgtaattggagcgcatcattagaagctcattttcaagaagaagat
gttgatatgggcggtagcggtggtggttttacttcagcaaaaaattttagacgtaaaggt
cgcagtggtactcctccaccaaagggggccaaaaggaaactgctagatagtccagtgggc
tggttcagggttacaattccctatggtcataaatatgaaaagaattttattttaaaatta
ttaatggaccatgttagtccacttacattgtacccagttatgtggacatctgaaaggaac
gtggtaacattttatgttgatgaatataaagtggctgaaaaacttaataatttagaccgc
caaatccgttatcctgatggttttaatatgattataaaggttaatactggatcacccaat
gtggttgatataaacgaatcaatgaaagagaaaatgaaacttgcaatggccaaaagatac
aatgctgccacaagggctttagatttgaccaagtttcatgcagatcctgatttacaagat
gtgttttgtgctcttttcaaacctatcatactactgactgcaattgatataatttctgta
aatatacctgatctcgaagcattaaatttatatgataataggatacatgtgcttagtcac
ctaaagaaactaaacactaaactgccaaatttaaagattctccacattggaaacaacaag
ataaaggatatatcaatgttggacgcattatctggtttgccgctcgttgatgtggtccta
gatggcaatcctttgtgtgacaaatacaagaatcaagaaacttacatcagcgaagtaagg
aagaggttccccaaggtcatgaaactggacggtgtggacttaccccctcccatcagtttt
gacatatccgaagaggtaccattgccaacctcccagcagacgttcctgtgcaatgcggaa
ggccaaggaatcgtgcgacaatttctcgaacaatacatccagatcttcgatggtgaaaca
agacaaccacttttgcaagcatatcatgaacaggccaccctgtcaatgacgatggcttat
ccgtacgggcagcatcagaaaaactcgagctggctcaattggtatttgacggataacagg
aacatattaagagtgacagattctgacagacgcatgagacttcttaaacagggccatttg
gccgttgtttcgtttctgaacgacatgcctgcaacaaaacatgacattcatagtttcacc
gtagacttgtgtctctttacacctcagctaattaatttaacattcacgggtctttataag
gaactacatagcggtcacaaaatgcctcccatccgctacttttgtagaactttcgttatt
atacctgcaggatcgggcttctgtattttaaacgagatgctgcatgttactaatgccact
gaagagcaaagaaagattgcatttagaaccccggctccggcgccgccggtacaaactcct
gcacctcccaacaccccagtgaccacaccacctagtacttcaatacctgacgatgccgta
aaacagcagatggttcaggcgatggctcaacagtcggggatgaatttggattggtcacag
aaatgtttgcaagaaaccgattggaattttgagagagctgtgtttgttttcaccgaatta
caaaaacaaggaactgttcctcccgaagcattcgttaaatga
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