Agrilus planipennis (emerald ash borer): 108732891
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Entry
108732891 CDS
T07419
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108732891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apln03041
]
108732891
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108732891
Spliceosome [BR:
apln03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108732891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_HA2
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
nSTAND3
SRP54
ResIII
OB_NTP_bind
nSTAND_NTPase5
T2SSE
TsaE
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108732891
NCBI-ProteinID:
XP_025832794
UniProt:
A0A7F5R9Z7
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MGKNKDKKRRKRYETSSSDSDDVDSAEEARLRDIKERDEFAERLKKRDEEKVRKIVQASD
KRAYEEAAKRLKLEIQDKEKMVPKLRIESRRKYLEKRKEDKVVELEADIVDDEYLFEEEI
LTEREKKDREHKKKLLKLAKEHEQARELEQVQRYHMPRDLGKGASSDYVEVDDLEKVPHS
EQKKWEQEQMASAQFSFGAKDVSKKDEYELLLEDQIEFIQALQMPGSKDKEEKKPELTEL
QKKKLDIQETKISLPVYPFRDDIIQAVKDHQVLIIEGETGSGKTTQIPQYLHEAGFTENG
QKIGCTQPRRVAAMSVAARVAQEMGVKLGNEVGYSIRFEDCTSERTVIKYMTDGTLHREF
LSEPDLQSYNVMIIDEAHERTLHTDILFGLVKDIARFRPDLKLLISSATLDAQKFSEFFD
DAPIFRIPGRRFPVDIYYTKAPEADYVDACVVSVLQIHATQPLGDILVFLTGQDEIETCQ
ELLQDRVRRLGSKLRELLILPVYANLPSDMQAKIFMPTPPGARKVVLATNIAETSLTIDN
IIYVIDPGFAKQNHFNSRTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWSYKH
ELEDNTIPEIQRINLGNAVLMLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHH
GELTKLGRRMAEFPVDPMMAKMLLASEKYQCSEEVVTIGAMLSVNGAIFYRPKDKIIHAD
TARKNFNHIHGDHLSLLNVYNQWRDTDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRV
EIEMVSNPLESANIRKAITAGYFYHIARFSKGGSYKTVKHNQVRCFSYTLDVQ
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaaaataaagacaagaagcggagaaaacgttatgaaacttccagttcagattca
gatgatgtagatagtgcagaagaggctagattaagggacattaaagaacgagacgagttt
gcagagcgacttaaaaaacgagatgaagaaaaagtcaggaaaattgttcaagcttcagat
aaacgagcctatgaagaagctgcaaaaagactcaaattggaaatacaggacaaggagaag
atggtaccaaagcttcgaattgaatcacgtcgaaaatatttagaaaaacgaaaagaagat
aaagtagtagaactggaagcagatattgttgatgatgaatatttatttgaagaagaaata
ttgactgaacgtgagaaaaaagatcgtgaacacaagaaaaaattattgaaattagctaag
gaacatgaacaagccagagaacttgaacaagttcaacgttatcatatgcctagagattta
ggaaaaggtgcttcttctgattatgtggaggttgatgacctagaaaaggttccccattct
gaacagaaaaaatgggaacaggaacaaatggcctctgcacaatttagttttggagccaaa
gatgtttcaaagaaagatgaatatgagttattattagaagatcaaattgaattcattcaa
gctttacaaatgcctggttcaaaagataaggaagaaaagaagccagaattgacagaatta
cagaagaagaagcttgatattcaggaaaccaagattagtttaccagtgtatccatttaga
gatgatataattcaagcagttaaggatcatcaagttttaattattgaaggagagacagga
tctggaaaaacaactcaaatacctcagtacttacatgaagctggatttacagaaaatggt
caaaaaattggctgcacgcaacctcgtcgtgtagccgcaatgtcggtagcggcaagagta
gctcaagagatgggggtaaaattaggaaacgaagttggttacagtattcgttttgaagac
tgtacttcagaacggactgtaattaaatatatgacagacggcacactgcacagggaattt
ttgtctgaaccggaccttcaatcttataatgttatgataattgatgaagctcatgaacgt
acccttcatacggatattctttttggtttagtcaaagatatcgctcgatttcgaccagat
ttaaagttattaatatccagtgctactttggatgcacaaaaattttcagaattttttgac
gacgctcctatattcagaataccaggacgaagatttccggttgatatctactacacaaaa
gcacctgaagctgattacgttgacgcctgtgtagtatctgtattacagattcacgcaact
caaccccttggtgatattcttgtattcttaacaggtcaggatgagatagagacatgccaa
gaacttctacaggaccgtgttcgtcgtttaggttcaaaacttagggaacttttaatttta
ccagtttacgcgaatttaccaagtgacatgcaagccaaaatatttatgcctacacctcca
ggagcccgtaaggttgtactggccacaaatatcgctgaaacatccctaactatcgacaat
ataatttatgtaatcgatcccggatttgcaaaacagaatcattttaattcacgaacaggt
atggaaagtttaatggttgttcctatttctaaagcatctgccaatcagagagctggtaga
gccggaagagtcgcaccaggaaaatgcttccgtctttataccgcttggtcttacaagcat
gagctagaagataatacgattcctgaaatacagaggataaatttgggcaatgcagtatta
atgttaaaagcattggggatcaacgatttagttcattttgactttttagaccctcctcct
catgaaacgttagtattggctctagaacaactgtatgcattgggtgctttgaatcatcat
ggagaactaacgaaacttggtcgaagaatggccgagtttccagtagatccaatgatggcc
aaaatgttactcgcatccgaaaaataccagtgctcggaggaagtagtcacaattggcgca
atgctctctgttaacggtgctatattttatcgcccaaaagataaaattattcatgcagat
acagcaagaaagaattttaatcatatccacggtgatcacttaagtctattaaacgtctat
aatcagtggagagatactgattattctacccagtggtgctatgaaaattttattcagtat
agatcaatgaaaagggcaagggatgtccgtgaacagttggttggtcttatgcaaagagtt
gaaatcgaaatggtttcaaatccactagaaagtgcaaatatacgaaaagccattactgct
gggtatttttatcatattgcgcgattttccaagggaggttcttataaaacggtgaaacat
aatcaggtacgctgtttttcatacacactagacgttcaatag
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