Agrilus planipennis (emerald ash borer): 108733102
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Entry
108733102 CDS
T07419
Name
(RefSeq) replication factor C subunit 4 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03030
DNA replication
apln03410
Base excision repair
apln03420
Nucleotide excision repair
apln03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108733102
03410 Base excision repair
108733102
03420 Nucleotide excision repair
108733102
03430 Mismatch repair
108733102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apln03032
]
108733102
03036 Chromosome and associated proteins [BR:
apln03036
]
108733102
03400 DNA repair and recombination proteins [BR:
apln03400
]
108733102
DNA replication proteins [BR:
apln03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108733102
DNA Replication Termination Factors
ELG1-RFC complex
108733102
Chromosome and associated proteins [BR:
apln03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108733102
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108733102
Check point factors
HRAD17(Rad24)-RFC complex
108733102
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
RCF1-5-like_lid
Rad17
AAA_11
AAA_30
AAA_24
Mg_chelatase
AAA_16
SLFN-g3_helicase
AAA_22
RuvB_N
bpMoxR
AAA_19
AAA_18
DUF815
DUF6377
AAA_assoc_2
AAA_5
Microtub_bd
ResIII
AAA_7
Kinesin
DNAX_ATPase_lid
Gp44_lid
PLCB1-4-like_EFh
AAA_28
ATPase_2
Motif
Other DBs
NCBI-GeneID:
108733102
NCBI-ProteinID:
XP_025837280
UniProt:
A0A7F5RN72
LinkDB
All DBs
Position
Unknown
AA seq
357 aa
AA seq
DB search
MQSFLKSGKLSNSSEKSDPSTSKVVKKNQTTPWVEKYRPKTVSEVVEQNEVVAVLQQCID
GADLPNLLFYGPPGTGKTSTILAAARQLFGDMYKDRILELNASDERGIQVIREKVRTFAQ
LTASHIRPDGKPCPPFKIVILDEADSMTNSAQASLRRTIEKNIKSTRFCLICNYVSRIIE
PITSRCTKFQFKPIHENMIMKRLQFICKEEGVLCEEDVFNVVVSAVGGDMRRAITCLQSC
SRLRGKNEQININDVYEVTGIVPEKWFNDYIEACKKEPKDVADMVDTILLEAYPASQFVE
QFNDWLINQENISDKQKALIGNKLGVVSFHLQEGGSEFVQLLDLGCAVWKVLSKKEK
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcatttctaaaatcaggaaaactatcaaatagctcagaaaagagtgacccttca
acaagcaaagtagttaagaaaaatcaaacaactccatgggtcgaaaaataccgtccaaaa
accgtatcagaagttgtagaacaaaacgaggtagttgccgttctacagcaatgcattgat
ggtgcggatttgcccaatttacttttctatggcccaccaggtacaggaaaaactagcaca
attttagcagctgctcgacaattatttggggacatgtataaagatagaattctagaatta
aacgcctcagatgaaaggggcatacaggtaatcagagagaaagtgaggacatttgcccaa
ttaacagcatcacatattagaccagatggaaaaccttgtcctccatttaaaatagttatt
ctggatgaagctgactcaatgacaaattcagcacaagcctctcttcgaagaacaatagaa
aagaacattaaaagtacacgtttttgtttaatttgcaactatgtttcaagaattattgaa
cctataacatccagatgtacaaaattccagttcaaacccattcatgaaaatatgattatg
aagcgtttacagtttatctgtaaggaagaaggagtgttatgtgaagaagatgtttttaat
gttgttgtcagtgctgtggggggtgacatgaggagagcaataacatgtttacagagttgt
tctagactcagaggaaaaaatgagcaaataaatattaatgatgtgtatgaagtcacagga
attgttccagaaaaatggtttaatgattacatagaagcttgcaaaaaggaacctaaagat
gtagcagatatggttgatactatacttttagaagcttatccggcttcacagttcgttgaa
cagttcaatgattggctgataaatcaagagaatatttcagataaacaaaaggctctaatt
ggaaataaattaggagttgtaagttttcacctacaagagggaggaagtgaatttgttcag
cttttagatttaggatgtgctgtttggaaagtattaagtaaaaaagaaaaatga
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integrated database retrieval system
