Agrilus planipennis (emerald ash borer): 108733149
Help
Entry
108733149 CDS
T07419
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03018
RNA degradation
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108733149
09123 Folding, sorting and degradation
03018 RNA degradation
108733149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108733149
03041 Spliceosome [BR:
apln03041
]
108733149
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108733149
mRNA degradation factors
5'-3' decay
Lsm complex
108733149
Spliceosome [BR:
apln03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
108733149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
SM-ATX
LSM14
Motif
Other DBs
NCBI-GeneID:
108733149
NCBI-ProteinID:
XP_018319745
UniProt:
A0A1W4WI99
LinkDB
All DBs
Position
Unknown
AA seq
89 aa
AA seq
DB search
MSSMPVSSSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTEYESTP
EGRRITKLDQILLNGNNITMLVPGGEMPE
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaatgcctgtttcttcctctacattactaccattagagttggttgataaatgc
ataggatccagaattcatataattatgaaaaatgataaagaaattgtcggtacactccta
ggatttgacgattttgtaaatatgttgctggaagatgtgactgaatatgaatctacccct
gaaggcagacgaataacaaaactggaccaaatacttttaaatgggaataacattacaatg
ttagtacctgggggtgaaatgcctgaatag
DBGET
integrated database retrieval system
