Agrilus planipennis (emerald ash borer): 108733657
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Entry
108733657 CDS
T07419
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apln03036
]
108733657
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
108733657
Chromosome and associated proteins [BR:
apln03036
]
Eukaryotic type
Gene silencing
piRNA pathway
108733657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
108733657
NCBI-ProteinID:
XP_018320411
UniProt:
A0A1W4W8M7
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MSQTSARFIKLQQKTKLESFASPKILIHGSSIPAPVEKVLSVPFDPEIHKSLDRLGFKEV
RQVQMFTWPALRRRAHVFMVSGPKSGKSMAIIPAVASYLQERIERYINLPDNEVGPIAVV
LCKGCESAEHIFDLYKKLFECIKGKPSMYMAIPPMDKTRLNQFYKQCDILVATPKTLFWL
LHSRIVNLKRLCHFVIEDGDVILQKFSKEMELIFRNVQNMLEHRLCNYSVQMIVASEKWN
VHLEKLIKKLNYIPTICINNYLEAALYGRVNFEFVFVKEHHKKMQVVDIIESKMHLHKTI
ILCNRQSEVKDVLEYLQLKSISAVEINSSNSKEEIYEYEKSWMNPNAQNFVLLCTDEVYR
HFLNITDATLLIHYSLPSSWTYFSDRFKVMVDNISSPLSFKQMDENLYCKTYIFMDQSCE
MQFPRLVQLLQRLDKTLPSKYMNYYYFKKRKEEAKRIEDKIELCKNIKIFGFCEKVKCPK
RHVLSKQLDLNGFLPERGTINFTLLRVEEVNMFYVKLLQFTDTKGQLIKKYSEDYEEMEE
KLNKSINLEQDYADDLVVGNYYAVFRDEKLKRCQLLRIVDDATNSIKKTKVIVKLLDYGP
QIRVSSPLYNLPKEFLSITPRAFTLYFGNLVPPDGDEKWSTDCKSKLKNALLTVEYNNER
SYFSSEVLLLLGHDLWVKNVYLYENIDTLRTTTTKMNVKKVLKDLKLVVEIEQPMDNLYK
MCKEADIALPEFMVAEESSSKFFEQVKPNWAFLEGSLNYTEVFLCSVISPDRFFVRLKKF
DDLLQLLEKEINAAIQKPFYPDNFVVTKGCSYLAKDKKTEEYRRAFVCEIENKVAKVFLV
DYGITAIVPIETLKFLDESFIIKLPYQAIECHLYGVDPFGCSWQNNASKILCDYGFDEAS
KRTLYTYVYDNTKTGHLTFNLNYGVLLLCYNDKSKPIFINQLLVDCGEAVSSDDKSLDLN
VTLPQSVNENEEELEEEPIEEVKNCDNSSLYDDSCSFCSSDIVVFDQDFFLEQFGIKINS
ATKEETKPAICDNPDKYLPVIKALPPAEYLTPAVNWYQTKERIYLTILLPSVDQFEMKLV
REKFLHFWTIHNGREYRLDLIFYSKLKSNFKFSSGLNVKATFVKQEPAEWPRLECTPSHK
KIKYDLTKIDFPEEMEKKLFLDLNINDDVECDMNEIIIGSDEDYSESDLEESTSD
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaacttccgccagatttatcaagttacaacaaaaaaccaagcttgagagtttt
gcttccccaaaaatcctcattcatgggtcttcaattcctgcacctgtagaaaaggttctt
tcagtcccgtttgatccagaaatccacaaatctcttgatcgattgggtttcaaagaagtc
agacaggttcagatgttcacttggcctgctctaagacgtcgcgcgcacgtgttcatggta
agcggtcccaagtcgggtaaatcgatggcaattattcctgctgttgcctcatatttgcaa
gaaagaatagaaagatacataaatttgcctgataacgaggttggaccgattgcggtggta
ctatgcaaaggttgcgaatcagctgaacatatattcgatttatacaaaaaattgtttgag
tgtatcaagggtaaaccctcgatgtatatggctattccgccaatggacaaaacgagactg
aaccaattttataaacagtgtgatatccttgtggcaactcccaaaactcttttttggttg
cttcattcaagaatagtgaatttgaaacgtttgtgtcattttgtaatcgaagatggtgat
gttattcttcagaaattttcaaaagagatggaacttatttttagaaacgtgcagaacatg
ttggaacatagattatgtaattattccgttcaaatgatagttgcttcagaaaaatggaac
gtacatttagaaaaacttatcaaaaagttaaattatattcctaccatttgtataaataat
tatttggaagcagctctgtatggtagggtaaattttgaatttgtgtttgtgaaggaacat
cacaaaaaaatgcaagttgtggatattattgagtcgaaaatgcatctacataaaactatt
attttgtgtaatagacagtcagaagtaaaggatgttttagaatatttacagttaaaaagt
ataagtgctgtggaaattaattcgtcaaacagtaaagaagagatttatgaatatgaaaaa
tcttggatgaatccaaatgcacaaaattttgttttgttatgcactgacgaagtatatcgc
cactttttgaacataactgacgccacattgttaatacactattcattaccttcatcatgg
acatatttttctgatcgttttaaagtaatggttgataatatttctagccccttgtcattc
aagcagatggatgaaaatctttactgcaaaacatacatctttatggaccaaagttgtgaa
atgcagtttccgcgactagtacagctgttgcaaagattggacaagacgctaccttccaaa
tatatgaattattactatttcaaaaaaagaaaagaagaagccaaaagaatcgaagataaa
attgaactatgtaaaaacataaagatatttgggttctgtgaaaaagtgaaatgcccgaag
aggcacgttttatcaaaacaattagacttgaatggtttccttccagaaaggggcaccatc
aattttactttattacgtgttgaagaagttaacatgttctatgtaaaacttttacaattt
acagacacaaaaggacagttaataaaaaaatattcggaagattatgaagaaatggaagaa
aaattgaataagagtattaatttagaacaggattatgctgacgatttagttgttggaaat
tattatgctgtcttcagagatgaaaaattaaaaaggtgtcaacttctaagaatagtagac
gacgctaccaacagtattaaaaaaactaaagttatagttaaactactagattacggtcct
cagataagggtgagctctcctctttacaatctccccaaagagtttctgtcaattactccc
agagcttttacgttgtactttggaaatttggttccacctgatggtgacgagaaatggagt
acagattgcaaatcaaaattaaaaaacgcattattaacagttgaatacaataatgaaagg
tcttacttttcaagtgaagtcctgctactcctgggtcacgatttatgggtaaaaaatgtc
tatctgtacgaaaatatcgacacgctgaggactacaactacaaaaatgaacgtgaaaaaa
gtgttaaaagatttaaaacttgtcgtagaaatcgaacaaccgatggacaatctatataaa
atgtgtaaagaggctgatattgcattacccgagttcatggtggcagaggaaagcagttcg
aaattttttgaacaagtaaaacccaactgggctttcttagaaggaagtttgaactatact
gaagtatttttatgttcagtgatatctcctgaccgtttttttgtacgtctaaagaaattt
gatgatttattacagttgttagaaaaggaaataaatgctgctattcagaagcccttttat
cccgacaactttgttgttacgaaaggctgttcatatttagctaaagacaaaaagaccgaa
gaatatcgacgtgcttttgtttgtgaaatcgagaataaagttgcaaaagtttttttagtt
gattatggtattacagcaatcgtgcctattgaaacgttaaagtttttggacgaaagtttt
attataaaattgccttaccaggcgattgagtgtcatttgtatggagttgatccatttggt
tgttcatggcaaaataatgcaagtaaaatattatgtgattatggtttcgatgaagcctca
aagaggacattgtacacatatgtatatgataacaccaaaactgggcacttaacatttaat
ttaaattatggtgtacttctactctgctacaatgacaaaagtaaaccaatttttattaac
cagcttcttgttgattgtggtgaagctgttagttcagatgataaaagtttagatttaaat
gttactctaccacaaagtgttaatgaaaatgaagaagaattagaagaagaacccattgaa
gaagtcaagaattgtgataactcatctttgtacgacgattcgtgttcgttttgttcaagt
gatattgttgtttttgaccaagacttctttttggaacagtttggaattaaaattaatagc
gcaacaaaggaagaaacgaaaccagccatttgtgataatccagacaagtatttaccagtc
ataaaggctctaccacctgcagaatatttaacccctgcagtcaattggtaccagactaag
gaacgtatttacttgacaattttattaccatcagttgatcaatttgaaatgaaattggtt
agagagaaatttctacatttttggacaatccacaatggaagggaatatcgcctagaccta
attttttattcgaaactaaagagcaatttcaaattttcatctggattaaatgtaaaggca
acttttgtaaagcaggaacctgcagaatggccgcgtctcgaatgcactccaagtcataag
aaaattaagtacgacttaacaaaaatagatttcccagaagagatggagaaaaaactcttt
ttggatctaaatataaatgacgacgtagagtgtgatatgaacgaaattatcattggctca
gatgaggattacagtgaatctgatttagaagaatctacatcggattag
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