Agrilus planipennis (emerald ash borer): 108733832
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Entry
108733832 CDS
T07419
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108733832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apln03021
]
108733832
Enzymes [BR:
apln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108733832
Transcription machinery [BR:
apln03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108733832
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
108733832
NCBI-ProteinID:
XP_025836904
UniProt:
A0A7F5RLK8
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MPKEQYREADVARKISYVSFGIESAENMQQQAHLQVIAKNLYNQDVNRTPVPFGVLDPKM
GTNQKDSPCQTCGKNLNECVGHFGYLDLELPVFHVGYFRSIITVLQSICKKCAHILLDKN
EQNLFRSKICNPNLSYMIKKSLRKRIIDKCKKITICPHCKECNGVVKKMPSVKGGVGGSV
LKIVHEKYRHKRDKDTVIKTQVAEFNEAIESNPEIQSVLSSATITQVLTPIDVLNLFQRI
PEEDIPLLAMDAKRAHPKDLIFTRMLVPPVCIRPSVASDIKAGTNEDDLTMKQSEIIFIN
DVIKKHKQCGASVNMYQEGWDFLQLQTALYINSELSGIPLAMMPKKPGRGLVQRLKGKQG
RFRGNLSGKRVDFSGRTVISPDPNLEIDQVGVPCHMAKILTFPEFVNRANVHLMKQLVIN
GPDIWPGANYVQQKGSQFKKFLKYGNRQKLAQELKYGDMVERHLCNNDVVLFNRQPSLHK
LSIMAHRAKIHYHRTLRFNECVCTPYNADFDGDEMNLHLPQTYEAKAEALILMGNKSNLV
TPRNGELLIAATQDFLTGAYLLTKKDTFLDYPHATQLAATLLAGNDENMDIDLPPPAILK
PRRLWTGKQVFSLILKPNKHCPVKANLEAKGKAYTKNKELCVKDSYVLIRNSELIAGTLD
KGHLGSGGKGGNIFFILLRDFGQDHAIKAMWRLARLSSNLLMNTGFSIGIGDVTPGETLV
QRKNKLLSSGYKKCDEYIRAMAEGKLACQPGCNEEETLEAVILKELSVIREHAGQACVAE
LHPTNSPLIMALSGSKGSFINISQMIACVGQQALNGKRVPNGFDDRSLPHFERFSKTPAA
KGFVENSFYTGLTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLVIHYDGTV
RNAEEDVIQTVYGCDGLDPTYMEGKDCPVDFERVLHHIQAKCPYRDETPLNGNQIRKAAN
AFLKTDALSECIDDFRNELRNFMELYAKKVEDTHEKFGSAKVVNEVHRLTCSQLVTFMQT
CGQKYTRAIIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINAS
KNISTPIIRASLKNPHDPEFARKVKVRIERTTLGEVTSYIDEVYTKSDCFLLIKLDYERI
KLLQLEVSAESIRYSLCTSKLKLKPNDIKVESETIITIHPNRTKNLNRLNFSLHEIKEQI
PSVVIKGLPTVNRAVIAREDKGGESYYNLCVEGDNLREVMATYGVDGHKTVSNNIMEVYH
TLGIEAARQTIMQEIKMVMENHGMSVDYRHIMLLAAQMTHTGEVLGITRQGLAKMKQSVL
NLASFEKTADHLFDAAYYGQSDKISGVSESIIMGMAAPIGTGIFKLLHKPLEVDDNPEKV
PLLFENAIES
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagaacagtacagagaggctgacgtagctaggaaaatttcctacgttagtttt
ggaatcgaaagtgctgaaaatatgcagcaacaagctcatttacaagtgattgctaaaaat
ctatataatcaagatgttaatcgtacacctgtcccatttggcgtgttggatcctaaaatg
ggaacaaatcaaaaagattccccttgtcaaacctgtggaaagaatttaaatgaatgtgtt
gggcattttggttatcttgatctcgaacttcctgtatttcatgttggttattttcgcagt
attattacagttttgcagtctatttgcaaaaagtgtgcccatattttacttgataagaat
gaacaaaatttatttcggtcaaagatatgcaatcctaatctaagttatatgataaaaaag
tcccttagaaaacgaattattgataaatgtaagaagataaccatttgtccacattgtaag
gagtgtaatggagtggttaaaaaaatgccatctgttaaaggaggtgtaggtggttcagtt
ctcaaaattgttcatgaaaaatacagacataaacgtgacaaagacactgtaattaaaact
caagttgctgaatttaatgaagcaatagaatcaaaccctgagatccagtcagttttatca
agtgcaacaattactcaagtcttaacacctatagatgttctaaacctatttcaaagaatc
cctgaggaagatattcctttattggccatggatgcaaagcgagctcatcccaaagactta
atttttaccagaatgttagttccaccagtttgcattagaccatctgtagcatcagatata
aaagctggaactaatgaagatgacttgacaatgaaacaatcagaaattatttttattaac
gacgtaattaagaaacataaacaatgtggagcatcagtaaatatgtatcaggaaggttgg
gacttcttacaattgcaaactgccctttacatcaacagcgaactttcaggaattccgtta
gcaatgatgcccaagaaaccaggtcgtggacttgtgcagagattaaaagggaaacaaggc
agatttcgtggtaatttgtcaggaaaaagggtcgatttctctggaaggacagtaatttct
cctgatcctaatttagagatcgatcaggttggtgtgccctgccatatggcaaaaatctta
acatttcctgaatttgtaaatcgagctaatgttcatttgatgaaacaattagtaataaat
ggtccagacatttggccaggagcaaattatgtacagcaaaaaggctcgcagttcaagaag
tttttaaaatatggtaacaggcagaaacttgcacaagaattgaagtatggtgacatggtc
gagcggcacctttgtaacaacgacgtagttttatttaatcgtcagccaagtttgcacaaa
ctatcaattatggcacatagagcaaaaatacattaccaccgaaccctcaggtttaacgaa
tgtgtatgcactccatataatgctgattttgatggggatgaaatgaatttacatttaccg
cagacgtacgaagccaaagctgaagctctcatacttatggggaataaaagcaatctcgta
acgccaagaaacggagaactcttaatagctgcaacacaggacttcttaacaggagcatat
ttacttactaaaaaggatactttcctggactatccacacgctactcaactggcagctact
ttattggcaggaaatgatgaaaatatggacattgatttgcctcctccagccattcttaag
cctagaagattatggacaggcaaacaagtgttcagtttaattttgaaaccaaataaacac
tgtcctgttaaagctaatcttgaagccaaaggaaaggcctacactaaaaataaggagctt
tgtgttaaagattcttatgtacttattcgtaattctgaattaattgctggaactttggat
aaaggtcatttggggtctggtggaaagggaggaaacattttctttatattgctaagggac
tttggacaagatcatgccattaaagctatgtggagattagcaagattgtcgtcaaatcta
ttaatgaacactggattttcgattggaattggcgacgttacaccaggtgaaacattagtt
caacgtaaaaataaattactttcatcaggatataaaaaatgtgatgaatacataagggcg
atggcagaaggaaagctcgcttgtcaaccaggatgtaatgaagaggagactttggaagca
gttattttgaaagaattatcagttattagagagcatgcggggcaggcttgtgtagccgaa
ttacatccaacaaacagtcccctcataatggcactttcaggatcgaaaggttcttttatc
aatatctctcaaatgatagcatgtgtaggtcagcaagccttaaatggaaaacgggttccc
aacggttttgatgacaggtcgttgccccactttgaaagattctctaaaactcctgctgct
aaaggatttgttgaaaacagtttttacacaggcttaacgccaacagaatttttttttcac
acaatgggaggcagggaaggtttggttgataccgccgtcaaaactgcagaaacagggtac
atgcaaagaagattagtaaaatctttagaagatctagtcatacattatgatggtaccgtt
cggaatgctgaagaagatgttattcaaacagtttacggttgtgatggattagatcccaca
tacatggaaggtaaggattgtcctgttgattttgaacgagttttacatcacattcaagcc
aagtgtccatacagagatgaaactccgttaaatggaaatcaaataagaaaagctgccaac
gctttcctaaaaaccgatgctttaagcgaatgcatagacgattttagaaatgaattaaga
aattttatggaattgtatgcaaaaaaagttgaagatacacatgaaaaattcggttctgca
aaagtcgtgaacgaagtacaccgtttaacttgcagccaactggtgacttttatgcagact
tgcggacagaaatataccagggcaattatagaaccaggaactgctgtaggagccctggcc
gcgcaaagtataggagagcctggaactcaaatgacacttaaaacttttcactttgctggt
gtcgcaagtatgaacataacacaaggagttccaagaataaaagaaattataaatgccagt
aaaaatataagtacgccaattataagagcgagtttaaaaaatccccacgatccagaattt
gccagaaaagtaaaagtgcgtattgaaagaacaactttaggagaggttacttcatacatc
gacgaagtatacacaaaaagcgactgcttcttattaattaaactcgactatgaacgcata
aaattactacagttagaggtcagcgcagaaagtataagatacagtctttgtacgtcgaag
ttaaaattaaaacctaacgatattaaagtagagagtgaaacaataattactattcaccca
aatagaacaaaaaatcttaaccgcttaaacttttctttacatgaaattaaagaacaaatt
ccatccgttgttatcaaaggtttacccaccgtcaatagggcagttattgccagggaagat
aaagggggtgaatcatattataatttgtgcgtggagggtgataatttaagggaagtaatg
gccacatatggtgttgatggacacaagacagtctcaaataatatcatggaagtttatcat
acactaggaattgaagctgcaagacaaacaataatgcaggaaattaaaatggttatggaa
aatcacggtatgagcgtagactatcggcatataatgttgctagcagcacaaatgacccac
actggagaagtcttgggcattaccagacaaggtttagcaaaaatgaaacagtcagtctta
aatttagcatcgtttgagaaaactgcagaccatttatttgatgcagcttattatgggcaa
tcggacaaaataagtggagtatcagaaagcataattatgggaatggcagcccctattggg
actggaatcttcaaattgctccataaaccactggaagttgatgataacccggagaaggtt
cccctactcttcgaaaatgcaattgaatcatag
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