KEGG   Agrilus planipennis (emerald ash borer): 108733847
Entry
108733847         CDS       T07419                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
apln  Agrilus planipennis (emerald ash borer)
Pathway
apln03013  Nucleocytoplasmic transport
apln03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:apln00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108733847
  09122 Translation
   03013 Nucleocytoplasmic transport
    108733847
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apln03019]
    108733847
   03041 Spliceosome [BR:apln03041]
    108733847
Messenger RNA biogenesis [BR:apln03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     108733847
Spliceosome [BR:apln03041]
 Complex C
  Other components
   EJC/TREX
    108733847
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    108733847
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N Tricorn_2nd eIF2A Beta-prop_Vps41 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_HPS5 DSE1_N WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N PAC11 RMC1_N WDR90_beta-prop_4th NBCH_WD40 B-prop_COPA_B_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C TRM82_WD ASA1 WD_LRWD1 Beta-prop_ELP1_1st Peptidase_S9_N vWF_A MSP1b
Other DBs
NCBI-GeneID: 108733847
NCBI-ProteinID: XP_018320691
UniProt: A0A1W4W9M0
LinkDB
Position
Unknown
AA seq 320 aa
MDSEKVEELINYFKTHNKSKEYLGHTAKVHSVGWSCDGKRLASGSFDKSVCIYLLERDRL
NKEVVFKGHGGSVDQLCWHQSHPDLLSTASGDKSVRIWDVRVQKSIAAINTKGENINITW
APNGETIAVGNKEDLVTFIDAKTHKIRSEEQYNFEVNEISWNNTSDLFFLTNGQGCIHIL
SYPDLEIQHVLKAHPGTCICIEFDPTGRYFATGSADALVSLWDIDELACQRVFTRMDWPV
RTISFSHDGQLLASASEDLIIDIAYVETGDKIADVSVDAATFTVAWHPSMYLLAYACDDK
DSYDRKRDAGSLKVWGFPSD
NT seq 963 nt   +upstreamnt  +downstreamnt
atggactcggaaaaggtagaagaattaataaattactttaaaacccacaataaatcaaaa
gaatatttaggtcacactgccaaggtgcattctgtgggttggagttgtgatggaaaacgt
ttggcgtcaggctcctttgacaagtcagtctgcatttatctgttagaacgggaccgattg
aataaagaagttgtatttaagggtcatgggggttcggttgaccagctttgctggcaccaa
tcgcacccagacttgttaagcacagccagtggagataaatcagtaagaatatgggacgta
agagtgcaaaagagtattgctgctataaacacaaaaggggaaaatataaacataacgtgg
gcaccaaacggtgaaacgatagcagtgggtaataaagaagacctggtgacatttattgat
gccaagactcataaaataagaagtgaagaacagtacaattttgaggtgaatgaaatatca
tggaacaatactagtgatctgttctttttaacaaatggtcaagggtgtatacatatactc
agttatcccgatttagaaattcaacatgtgttaaaggcccacccaggtacatgtatatgt
atagaatttgacccaacgggaagatactttgcaactggcagtgccgatgcgctggtttct
ttgtgggatattgacgaattagcttgtcaacgtgtttttacgagaatggattggccagtg
cggacgatatcatttagtcatgatggtcagttactggcatcggcatctgaagacctaatt
attgatattgcttatgtggaaactggtgataagattgcagacgtgtctgtggatgcagcc
acttttacggtagcttggcatccttcaatgtatcttttagcatatgcatgtgatgacaaa
gactcttatgatagaaagagggatgcaggaagtcttaaagtttggggctttccatcagat
taa

DBGET integrated database retrieval system