Agrilus planipennis (emerald ash borer): 108733995
Help
Entry
108733995 CDS
T07419
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108733995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108733995
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
108733995
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_16
TPR_2
TPR_19
TPR_14
TPR_CcmH_CycH
TPR_1
TPR_17
TPR_8
TPR_12
CFAP70_TPR_C
CFAP70_mid_TPR
TPR_11
ANAPC3
TPR_9
TTC22_N
ARM_TT21_N
ChAPs
CABIN1_N
ARM_TT21
ARM_TT21_5th
ARM_TT21_C
PknG_TPR
TPR_15
HAT_PRP39_C
TOM20_plant
TPR-S
TPR_EMC2
TPR_SusR
Motif
Other DBs
NCBI-GeneID:
108733995
NCBI-ProteinID:
XP_018320873
UniProt:
A0A1W4WL79
LinkDB
All DBs
Position
Unknown
AA seq
1306 aa
AA seq
DB search
MASNNIKSLLKDAREALKNKDYQTSLKLCKTILKQDKENYMGLVFLGISLQEVGPTDQAK
KAFLKAINVNSENVLAWNGLLNYYDQFENEIDTAHLIEVYLKILDLETNDKKLKEIYEKI
EAIKFIPENLFPSVVNHMYKAAKSLKERNCISEGPWSAIVAVIWNKKDKTELSEEIWQML
EEALSELVHTSKWMSSDNYSKYLKVLHERKKYVLLLEECQRMHSIFEESTIPLEWVCKLY
NQLEVEKDNLSAVFEPTAKEYYEILEKINPKSATVLFTNSLIHYKNGNILLARDVLKEVT
SLHPKFLHGWMLLTSCYLKLKNFEEALKSSEHTQKLLKETNNTSTFLCNTVLDLELQILS
MHSMQECWEKCIEKCKEIANGDKNRKLCMARSYMNLGKLIEAKTILNEINGDENDVSVSV
LKANLLEKEGKTEDAIKLLTKLSENNNDSDVWFEVGLLHWKIHDYDKSAIPFLKAAKLNP
NNYSIFLYLGHYYQKYNNIEKAKKCFEKAFKINSNCIEAALELGEIYRKLEDWDANLTLL
RELAGGSVNEWNNWAWVQLGVSYLEKQDFNCAIDTWRYLVRCKPLNSHFWEGLADSYLAR
GSYTSALKCYQKAAEITPNALYPLLQIATVKRILGQYAEARADFEALLSTNQKYVPALKG
LAETCLNQAKLYNKNQLLGLTRDCCQCALENLLTAIKERNNFSCLWKLAADGCYLVAQLP
EKYCCLLIPASLVDESDDGGSKIMEMDDLFLMATRYYSKSILLSKSNILIWHDLASCYLS
YAKSVTDPRKAKTLYDKALMAAQYCTKENPSHWEHWNLLGNIAISKDPSDYALAQHAFIK
AITVEHNSAEAWTNLGSLYLKLDEFKLANAAFARAQRADPTYVNSWVGQAIIAETMGAEE
AMDLFRHSTQLGMQMQGALGYGQWVCQTLIDSPPHTFIYAIHKMHAVPVACDALTWYIER
NPYDSCAWNMLGILRERLGMKATTLEAFTNAYKKCIEIYRDKAKINMGRINFRLGKYKEA
IDFYQSVKEANFKSGSGLALARFKAKQYEESYEEYEAALHWLTDEQSHQSDLLVALASMA
YTFQGPDAAKTLLFQSVKCNPPSPFAYYAILALGLLNDDFKLAEAAVKEMTTLKDRKECL
SHTSTLLSHFYFKKNEISKGIRELSKLIHRHPDQASLWLSFAILFARCKSGKKCITLAAS
HCAKIAVKLRETNMDIKLALCIISLLCSIAGDEKQALKAAQKAVHCYPNLSECWCVLIFT
LLSNQQTTKNHKFWLKNALRSAKDLDGTSTATKEWLKIQEKIVDDL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaataacattaaatcgctcttaaaagatgctcgtgaagcccttaagaacaaa
gattatcagacatcgttaaaactttgcaagaccattttaaagcaagataaagaaaactat
atgggattggtttttttgggaatatcattgcaagaagtaggacctactgaccaagcaaaa
aaagcttttcttaaagctataaatgtaaactctgaaaatgtcctagcatggaatggattg
ctgaattattatgatcaatttgaaaatgaaattgacacagcacacttgattgaagtttac
ttaaagattttagatttagaaacgaatgataaaaagctgaaagaaatatatgaaaaaata
gaagcaataaaattcataccagaaaatctgttcccttctgttgtgaaccatatgtacaaa
gcagcaaaatccctgaaagagcgaaactgtatatcagaagggccatggtctgctattgtt
gctgttatctggaacaaaaaagacaaaactgaattatctgaagaaatatggcaaatgctt
gaagaagcactttctgaattagttcatacttcaaagtggatgagcagtgataattactcc
aaatacttaaaagttttgcatgaaagaaaaaaatatgtacttttacttgaagaatgtcaa
agaatgcattccatttttgaagaaagcactattccattagaatgggtttgtaaactatat
aatcaactagaagtggaaaaggataatttaagtgcagtttttgaaccaacagctaaagag
tattacgaaatactagaaaaaattaatccaaaatctgccacagttttgtttacaaacagt
ttgattcattataagaatggtaacatacttctagcaagagatgttctgaaagaagtcaca
tccttgcacccgaaatttctgcatgggtggatgttattaacgtcttgctatttgaaatta
aaaaatttcgaagaagctttaaaatcgtcagaacacactcaaaaactactcaaagaaaca
aataatactagtacatttttatgcaatactgtgctagatttagagctgcaaatattatca
atgcattcgatgcaggaatgctgggagaaatgcatcgaaaaatgtaaagagattgcgaac
ggtgataaaaatcgaaaattatgcatggcgagaagctatatgaatttaggaaaattaatc
gaagcaaaaaccatactcaatgaaataaatggagatgaaaatgatgtgtctgtatctgta
ttgaaagcaaatcttctagaaaaagaaggaaaaactgaagacgctataaaattactgaca
aaactgagtgaaaataataacgattcagatgtttggttcgaagttggtctcttacactgg
aaaatacatgactatgataaaagtgcgataccatttctaaaggcagcgaaattgaacccc
aacaattattcaatttttttatatttggggcattactatcaaaagtataacaatattgaa
aaggcaaaaaagtgtttcgaaaaagcctttaaaattaatagcaattgtattgaagcggct
ctggaattgggagaaatatacagaaaacttgaagattgggatgcaaatctgactcttttg
cgagaattggcgggcggttcagttaatgaatggaacaactgggcttgggttcaacttggc
gtttcttatttagaaaagcaagatttcaattgtgccatagacacatggagatatctggtg
agatgtaagccgctaaacagtcatttttgggagggcttagccgattcttatttagcaaga
ggatcttacacatctgctttgaaatgttatcaaaaagcagctgaaataactcccaatgcg
ttgtatcctctattacaaatagccaccgttaaaaggattttgggccaatatgcagaagcc
agggctgattttgaagccttactttctaccaatcagaaatacgttcctgcgcttaagggt
ttagcagaaacttgcttaaaccaggcaaaattgtataataaaaaccaacttttgggttta
acaagagattgctgccaatgcgcattggaaaacctgctaactgctattaaagaaaggaac
aatttttcgtgtttgtggaaattagcagcagacggttgttatttagtagcccagctacct
gaaaaatattgttgtttgttaataccagcatctctcgtcgatgaaagtgacgacgggggc
agcaaaattatggaaatggatgatctatttttaatggcaacaagatattatagtaaatca
atattattgtctaaaagcaatatattgatttggcacgacttggcaagttgttacttatct
tatgcaaagagcgtaactgatccacggaaagcgaaaactttgtacgataaagccttgatg
gctgcacaatattgtaccaaagaaaatccttcccattgggaacattggaatcttttagga
aatatagcaatttcgaaagacccaagtgattatgcgttagcacaacatgcatttataaaa
gcaatcacagttgaacataacagtgccgaagcttggacaaatttgggcagtttatacctc
aagttggacgagtttaaactagctaatgcagctttcgcaagggcccaacgtgctgatccg
acgtatgtgaacagctgggtaggacaagctattatagcagaaacaatgggcgcagaagaa
gcaatggacctgtttcgtcatagtactcaattggggatgcaaatgcaaggtgctctgggt
tatggtcagtgggtctgtcagactcttatagattcaccacctcacacctttatttacgca
atccataaaatgcacgccgttcccgtagcgtgtgatgccttgacgtggtatattgaacga
aatccatacgatagttgtgcgtggaatatgttgggaattttaagagaacgcctcggcatg
aaggccacaacgttggaagcttttacaaacgcgtataaaaagtgtattgaaatatacaga
gacaaagccaaaataaacatgggaagaatcaattttcgattgggcaaatacaaggaagcg
atcgatttctatcaaagcgtcaaggaagccaattttaaatccggaagtggattagcatta
gcacgatttaaagctaaacagtacgaagaatcttacgaagagtacgaagcagcattgcat
tggttaaccgatgagcaatcgcatcaatccgatcttctggttgctctcgcctcgatggcg
tatacatttcaaggaccagatgctgcaaaaacccttctttttcaaagtgtaaaatgtaac
cctccatccccttttgcatactacgccattttggctctggggttattaaatgacgatttc
aaattggctgaagcagcggtaaaagaaatgaccactttgaaagatagaaaagaatgcttg
tcacacacatccactttactgtctcacttttattttaaaaagaatgaaattagtaaaggt
attcgggaacttagtaaacttatccatcgtcatcctgatcaggcatccttgtggttatca
tttgctattttatttgcaagatgcaaaagtggaaagaaatgcataacgctggcggcatcg
cattgtgccaaaattgcagtgaaactgcgtgaaactaatatggacatcaaattggcttta
tgtattatatcacttctctgttcaattgccggtgatgagaaacaagcactgaaagcggcg
cagaaagctgttcactgttatccgaatttatctgaatgctggtgcgttttaatattcacc
ttgttatctaatcaacaaacaactaaaaatcataaattctggttgaaaaatgcactacga
tctgcgaaagatctagacggtacttcgactgcaacgaaagagtggttgaaaattcaagaa
aaaattgtggatgacttataa
DBGET
integrated database retrieval system
