Agrilus planipennis (emerald ash borer): 108734092
Help
Entry
108734092 CDS
T07419
Name
(RefSeq) collagen alpha-1(IV) chain-like isoform X1
KO
K06823
collagen type XVIII alpha
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apln04147
]
108734092
00535 Proteoglycans [BR:
apln00535
]
108734092
00536 Glycosaminoglycan binding proteins [BR:
apln00536
]
108734092
Exosome [BR:
apln04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108734092
Proteoglycans [BR:
apln00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
108734092
Glycosaminoglycan binding proteins [BR:
apln00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108734092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
DUF1554
Motif
Other DBs
NCBI-GeneID:
108734092
NCBI-ProteinID:
XP_025836811
UniProt:
A0A7F5RLI8
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MAAVQCNTGFQGFQSGDGSPDTWPDIDKEGQIDAFSDINHEGPFPPTLPPPPPSPNGKTC
SCSEPEKNCCNFLFNGIQGEGSWPKGEKGDRGPRGPPGESIRGPPGPPGPPGLPAPALTE
GGDGMCSCNVSTFVDYLLQQKLLPGPPGSPGADGKEGPAGTPGLPGSPGERGLPGYTGDK
GERGDRGPPGPQGPTGSRGDPGPKGERGERGEPGPPGPPAPIQYDNLDVSNDVLPGSITR
TGIPGEKGDRGERGPVGPPGERGFKGQKGERGELGSKGEKGDKGHPGDKGARGAKGDPGE
PGKDGLPGLPGVDGLPSPKGEKGDTGSPGPPGPPGVSLYTPGNGELIAAERGPKGDKGDK
GEQGERGLDGTPGVPGVKGSQGSLGPSGPKGERGAPGPITVTNATTNQIITIKGEKGDMG
RRGRRGKPGPTGPIGPPGKPGPPGEIGLPGWMGRPGSPGIPGPKGDKGEPADFEIIKNLH
GEKGDKGEPGKDGTPGRDGSPGPPGPPSNENAKYVPLPGPPGPPGPPGPPGVPGTAGLPG
LSITGPKGEPSYGEPHFFSRPGRASASPPTYLEPEALRQELKVVPGAIVFRDRQSMLRVS
LVNPVGTIAYIMEEEALLVRVNNGWQYIALGSLLPLSTTTSTTHLPPVTLPQIRPPFESS
NLVKVPQWHPKLLKLAALNEPHTGDVHGIRGADYTCFRESRRAGLRGTFRAFLSSRSQNV
DSIVRPADRKLPVANLRGEILFNSWSEMFKGDGAVFVHPPRIYSFSGKNVLTDFTWPNKA
VWHGALPNGERALDISCDAWHTSSSSKSGLGASLQSPRLLEQTSYPCDSRLVILCIEATS
EQPTHLRKRSLDSNRFEEVDLDDSITPEEYSEYLKSIT
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagttcagtgcaacactggatttcagggatttcaatcaggcgacggatctcca
gatacttggccagacatcgataaggaaggacagattgatgccttttcggacataaaccac
gaaggaccatttccgcccacgttaccaccaccgcctccatccccaaatggtaagacttgt
tcatgctctgaacccgaaaagaattgctgtaactttctttttaacggcattcaaggagaa
ggatcttggccaaaaggtgaaaagggagatagaggacctcgcggtccacctggagaatct
ataaggggaccgccgggaccacctggtcctcctgggcttcccgcgcctgcattaacagag
ggtggagatgggatgtgttcttgcaacgtgagcaccttcgtggattacctcctacaacaa
aaactgctaccgggcccgccaggatcgccgggggccgatggaaaagagggtcccgcagga
acaccaggcctacccggttcaccgggtgaacgcggattgccaggatatacgggagacaaa
ggagagcgcggggacagaggtccaccgggacctcaaggccccactggatctagaggagat
ccaggtcctaagggtgaaagaggggaacggggagaacctggccccccagggcctccagca
cccatacagtatgacaatttggacgttagcaatgatgttcttccgggcagtataacaaga
acaggaattcccggcgaaaaaggggatcgcggtgaaaggggccccgttggtcctccagga
gagcgaggattcaaaggccaaaaaggcgaaagaggcgaactggggtccaaaggggagaaa
ggagataagggacatcctggagataaaggagcccgtggagcaaaaggcgatccaggtgaa
ccagggaaggatggactacctggtcttcctggagttgatggcctgccatctccgaagggc
gagaaaggagataccggaagtccaggacctccagggcctcctggagtttccctgtatact
ccaggtaacggagaattaattgctgctgaacgaggtccaaagggtgataaaggagacaaa
ggagaacaaggagaacgtggattagatggaaccccaggagttcctggtgtaaagggttca
caaggatcattgggaccgtcaggacccaagggcgaaaggggagctcctggacctattacc
gtcaccaacgccactactaatcaaattatcacaattaagggtgaaaagggagacatggga
cgcagaggacgtcgaggaaaaccaggtcctaccggcccgataggccctcccggcaaaccc
ggacctcctggggaaataggactaccagggtggatgggtcgtccaggatctccaggtatt
ccgggtccaaaaggggataaaggagagcctgccgattttgaaattataaaaaatttgcat
ggtgaaaagggagataaaggtgaaccaggaaaagatggtacacctggacgcgacggttct
cctggtcctcccggacctccctctaacgaaaatgctaagtacgttccattaccaggacct
ccaggtcctccagggccgccgggaccaccaggagttccaggaaccgcaggtttaccagga
ctatcaatcacaggaccgaaaggggaaccttcttacggtgaaccacactttttctcaaga
ccaggaagggcatccgcaagtccacctacatatttagaacctgaagccctaagacaagaa
ctgaaagtagtacccggtgccatagtttttcgtgatagacagtcgatgttgagggtctct
ctcgtgaatccggttggcactatagcatacatcatggaagaagaagcacttcttgtacgc
gtaaacaacgggtggcagtacattgcgctcggatcgttactaccactttcgacaaccacg
tccaccacacacctgcctccagtcacattaccccaaattcgaccaccatttgaatccagc
aacttagttaaagttcctcagtggcaccccaaactgcttaaattggctgcactaaacgaa
ccacacactggagacgtgcatgggataagaggtgcagattacacttgtttccgggaatcg
cgtcgagctggactgagaggaacatttagagcattcctgtcatccagatctcagaatgtc
gattcgattgtaagacccgctgatcgaaaattacctgtcgcgaaccttcggggtgaaata
ctgttcaattcctggtcagaaatgtttaaaggggatggagcggtattcgttcatccccct
agaatttactctttcagtggaaagaacgttttaacggacttcacatggccaaataaagcc
gtttggcacggcgcccttccgaatggtgaaagggctttggacatctcgtgcgatgcctgg
cacacgtcgtcaagcagcaaaagcggtcttggggcctctttgcaaagtccccgcctgctc
gaacagacgtcctacccctgtgatagtcgccttgtgattttgtgcatagaggcgaccagc
gaacaaccgactcatttaaggaaaagaagtttagattctaatagatttgaagaagtagat
ctagatgattcaattacaccggaggagtatagtgaatatctaaaatcgattacttaa
DBGET
integrated database retrieval system
