Agrilus planipennis (emerald ash borer): 108734327
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Entry
108734327 CDS
T07419
Name
(RefSeq) RNA-binding protein squid isoform X1
KO
K03102
squid
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln04320
Dorso-ventral axis formation
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09150 Organismal Systems
09158 Development and regeneration
04320 Dorso-ventral axis formation
108734327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108734327
03041 Spliceosome [BR:
apln03041
]
108734327
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
108734327
Spliceosome [BR:
apln03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
108734327
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
SET1_RBD
AICARFT_IMPCHas
DUF5737
NCBP3
Motif
Other DBs
NCBI-GeneID:
108734327
NCBI-ProteinID:
XP_025828894
UniProt:
A0A7F5R1X5
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MANQDCPMENGEDFSQDVQADQNFQQNDQMNGQQQNGGAGDASQMADSGSADTPGRDDDR
KLFVGGLSWETTEKELREHFGQYGEIESINVKTDPNTGRSRGFAFIVFNTAEAIDKVSSA
GDHIINNKKVDPKKAKARHGKIFVGGLTTDLSDDDIKNYFRQFGNIVEVEMPFDKTKNQR
KGFCFITFDSEQVVNELLKTPKQTIKDKEVDVKKATPKPDAMGMGMGMRGGRGGGRGMGR
GRGRGGGYAQNWGQNYGGYGGYNQGYGGGYDGYGGGYDYYGGGYGGYGAGYGGYDYSGNY
DYGYGNYEGGYGGGRGGVARGKGAGNFTGGKQRGGGGGGRNQRHQPY
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcaagattgtcctatggaaaacggagaggacttttcacaggacgtacaggca
gatcaaaatttccaacagaatgaccaaatgaatggacaacagcaaaacggaggcgcagga
gatgcgtctcaaatggccgacagtggaagtgcagatacgccaggccgagacgacgacaga
aaattatttgttggaggtttaagctgggaaactacagaaaaagaacttagggaacatttc
ggccagtatggcgagatcgaaagtattaacgttaagacagatccgaatacaggcaggtcg
cggggcttcgcgttcatcgttttcaataccgccgaagcaatcgacaaagtttcgtccgcc
ggcgatcacatcattaacaacaagaaggttgatcccaaaaaggcgaaagcacgacacggg
aaaatctttgttggtggtcttaccactgatctatccgatgacgacatcaagaactacttt
agacagtttggaaatatcgtagaagtagaaatgccttttgataagacgaaaaaccaaaga
aaaggcttctgttttatcacttttgactcggaacaggttgtgaacgagttattaaagaca
ccaaagcagaccatcaaagataaagaggttgacgtgaaaaaggctacgccgaaacctgac
gcgatgggtatgggtatgggcatgcgtggtggccgtgggggcggtcgaggaatgggccgt
ggtcggggtcgtggaggcggttacgcccagaactggggtcagaactacgggggatacggt
ggttacaaccaaggctacggcggcggctatgacggctacggcggtggctacgactactac
ggtggcggctacggaggctacggagcaggatacggcggttacgattactctggcaattat
gactatggatatggtaactatgaaggcggctacggtggcggaagaggtggtgtggcacgt
ggcaaaggtgctggaaacttcacgggtggcaagcaaagaggtggcggtggtggtggccgg
aatcagaggcatcaaccctattaa
DBGET
integrated database retrieval system
