Agrilus planipennis (emerald ash borer): 108734396
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Entry
108734396 CDS
T07419
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apln03000
]
108734396
03036 Chromosome and associated proteins [BR:
apln03036
]
108734396
Transcription factors [BR:
apln03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108734396
Chromosome and associated proteins [BR:
apln03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
108734396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
DUF3502
Motif
Other DBs
NCBI-GeneID:
108734396
NCBI-ProteinID:
XP_018321453
UniProt:
A0A1W4WMW1
LinkDB
All DBs
Position
Unknown
AA seq
2083 aa
AA seq
DB search
MTTSKQETNFRMYYDIDKESIRNELYCTICGISIKLGQKVEEHPVLKVAVCKPCLLEYNA
ADFNKNDLCVWCGEKNNTLRRCFMCKTGFCKKCLSHNLDDKGKWEGKWFCLKCDTEPIWP
LRNIFVKADLCSRKQRSLSQEKILPNEQPLRRLKRSKSVGCALSLKGDSLANQISKETMK
NLKKTNYQTLQDFLRIIAKDMILLFNECNKSVDDFKLDVFQPYTTKISQIISWFSYLCFF
IDSVNDNLNHLRTKILKESVECKNYDGILLLSDYRMKLKKNGKKVDTSPDSMVLPFSSSS
QSSQDDLYPLQSTSQVKKNSPKNFRLSLKNRRIIYSSDESSDEVESSTTHKKTFEEIQEK
KKNSKQQSPDAQEKAENKLRDMEAKDEAAILKELEDSNKKREENKQGSSCSESTEIYSHD
FLTARDSSAQFVDSEETIVRPNYGGLEICPETGYYIGGTVPDSSQSSSAGLTDSDTQSFV
FDIPDNLLKSVADIAGVEAQAVAKHAETEKGQNENGVNSNNLETNTNEGELIINVGDHEG
EIKDKKQVLNENKDDEINEGAELSEKNSDLKLDANYVEEKIDVEEEKPRKIDSITDDEVF
IQENSMQEVKDEDNVEEQINKILNTVSEYTNYINPSNVDVKEEYNYSTDELEDLLSESDE
NEKDMSTNVDEEKLKKAFTHLQNDNFMTDVNITSESSLDVSSDDSFSDSDGLNAVCSSKE
QEKVLGRIVSLPLQELIVQNNSLNDSREGDNVVEEETGGTSTDNTPDILPATSLSNEQDE
KIVNEKSSDKPFVPKSCCVLLDRLPKDFVLNKLREMKMDKERDIEDAELKKLLNLKTLDR
KRRHSSSDEENQKKRQRNSVYSPKITQQKDTSSSSEDDQFYEDSDEEGHNVSDKIEEIKK
NSETQDNQGLHILDEIAIRHKASNFLSSDSEDDSDAYDDEEEEENEKKKTFKKKLEKDKE
KESEKDKTKEKTKSTSWRSDPLLRQRFEISLDSEDSDTGEEKKSKSVSKKKQELVETIED
DLDIEMPQRQRKRKKSYSSSFTDDDKDIKTELSDDFQMPASFNSNKTIILLSSSDSDIEF
ITDSPIRNKAKSRKKNKSESENDEDSLRKKGRKNIREILSDDVLEEDTKKAIEEEKQRNI
RVSQKQQLMSNFLSQSSENLEEEGLILDVDSETQKPLIVVNHNLSKRLKNHQSEGVKFMW
SSCYESVEQIKQDNKGSGCILAHCMGLGKTFQVITLIHTLFKYQKETRTKCVLVVCPLST
VLNWENEFKIAFNIASNSKRPIVYILGDQQNSTFSKASRIKRWHDQGGILVMGYEAYSSA
LKTIRYSQNTHDKINAALVDPGPDLVILDEGHLLKNGKTSRTITLMQIKTKRRIILTGTP
MQNNLKEYYHMVNFVKPNLLGSWLEYSNQFVNPIVNGQYDDSTEEDVRKMKYRSHVLNKK
LKRTIQRFEVSELETYLPPKLDYVLFVQLHPVQVQLYQAFLENLNVDVIQAGRLFAHYHY
LQNVWSHPYLLVLQDKMKNMTKDKNIKEIDTIDLDPEITMVEQKPIATNWWSRIIPKDVG
TNIEYGSKFYIMLSIIEEAISCGDKIVVFSNSLNELDGIEHFLKLVGTPSCKVWRNKIDY
YRMDGTIKPDSRMSLCMSFNNPKNTQTKVFLVSHKVGGLGLNLVAANRVILMDVNWNPSY
ESQSIFRTYRFGQKKTCYVYRLVSMGTMEEVVYERSVTKLAVAGRVVDERQISRHYKSDD
LQKMYRANFDLNQLRPNLNVPEDVVLGKVYQKHTKELFKYHSHQALLENLPHESLTEEEM
ERAWLEFGRENEAARKLEISKQFIENAKKNSVDIRYQKNIETINALAEDVANKGPLLNST
IMRNGNFLNIPNTSMSASLVPAACRAFAKENLNNFISSQKTLTQTLPLISNVSSASRNSS
TQVGQFEEVFVPTRFGDVDANENRDNDVIVLEDNSWYNPSPASVDNNKSSEYSKTDGRIK
ASEQVPNKNRFPPSNRININLLRKPASTRLVPRATNTMISQEVIDVENHSLLAKLAKNHD
ISVSQILKPKIPEVDDQTDKGNTSNNCDNVVETSNVFYATFLV
NT seq
6252 nt
NT seq
+upstream
nt +downstream
nt
atgactaccagcaagcaagagactaattttcggatgtattacgacatagataaagagagc
ataagaaatgaactttattgtacaatatgtggtataagtattaaactgggccaaaaagtt
gaggagcaccctgttttaaaggtagctgtatgtaaaccatgtcttttagaatataatgca
gctgattttaacaagaacgatttgtgtgtatggtgtggagaaaagaataataccttaaga
agatgttttatgtgcaaaactgggttttgtaaaaaatgtttaagtcacaacttagatgat
aagggtaagtgggagggaaaatggttttgtcttaaatgtgatacagagccaatttggcca
cttaggaacatttttgttaaagcagatctttgtagcagaaaacaaagaagtctatctcag
gaaaaaatacttcctaatgaacagcctttgagacgacttaaacgttctaaaagtgtagga
tgtgcattatctttaaaaggagattctttagcaaatcaaatctcaaaagaaactatgaag
aatttaaaaaaaacgaattatcaaactttacaagactttctgagaattattgcaaaagat
atgatacttctttttaatgaatgcaataagagtgtcgacgacttcaaattagatgttttt
cagccatacacaactaaaataagtcaaataataagctggttttcgtatttgtgtttcttt
attgatagtgttaatgataatttaaatcatttgagaacgaaaattttaaaagaaagtgtc
gaatgcaaaaactacgatggaatattgctactttcagactatagaatgaaacttaagaaa
aacggcaaaaaggtagatacttcgcctgatagtatggttttgccgttttcaagttcatca
caatcaagccaagatgatctttatccattacagtctacatctcaagtcaagaaaaattct
ccaaaaaactttcggttgagtttaaaaaatagaagaattatttattcatctgatgagtct
tcagatgaagtggaaagtagtactacccataaaaaaacttttgaagaaattcaagagaaa
aagaaaaactcaaagcagcaaagtccagatgctcaagaaaaagcagaaaataaattgaga
gatatggaagctaaagatgaagcagcaattcttaaggaactagaagacagcaataaaaaa
agggaggaaaataagcagggaagcagttgttcggagtcaactgaaatatattcacatgac
tttttgactgctcgagactcaagcgcacaattcgtcgatagcgaagaaactatagtacgc
ccaaactatggcggtctggaaatttgtcctgaaacaggttattatattggtgggacagtt
ccagactcttcccagtcgagtagtgcgggactcacagacagcgatactcaatcgtttgta
ttcgacattcctgataatttattaaaaagtgttgcagacattgcaggtgttgaggcccag
gcggttgcaaaacatgctgagactgaaaaaggtcaaaatgaaaacggcgtgaatagtaat
aatttagaaacgaatacaaatgaaggtgaattaataattaatgtcggagaccatgaagga
gaaataaaagataaaaagcaagtacttaatgaaaataaagacgatgagataaatgaagga
gcagaactttcagaaaaaaatagtgatttgaaacttgatgctaactatgtggaagaaaaa
attgacgttgaagaagaaaagcctcgaaaaattgactcaataactgatgatgaagttttc
atacaagaaaattcaatgcaggaagtgaaagatgaggataatgtagaagaacaaataaat
aagattctgaatactgtatcagagtacaccaattatatcaatcctagcaatgttgacgtt
aaagaagaatataattatagcactgatgaacttgaagatttattaagcgagtctgatgaa
aacgagaaagatatgtctacaaatgtcgatgaagaaaagttgaaaaaagctttcacacat
cttcaaaatgataattttatgacagatgtgaatatcacaagcgagtcttctttggatgtg
tcaagtgacgacagtttttccgatagcgatggattaaacgcggtatgttcgtctaaggaa
caagaaaaagttttgggacgtattgtatcattacctttgcaagaattaatcgtccaaaac
aatagtttgaatgacagtagagaaggtgataatgtagtggaagaagaaactggtggaaca
agtacagataacacaccagatattcttccagctacttctttatcaaatgaacaagacgaa
aaaattgtaaatgaaaagtcaagtgataagccgtttgtaccgaaaagttgctgtgttctt
ttggacagactgcctaaggacttcgttttgaacaaactaagagaaatgaaaatggataaa
gaacgcgatattgaagatgctgaattgaaaaaacttttgaacctaaaaactctggacaga
aaaagaagacattcctctagtgatgaagaaaatcaaaaaaagagacaaagaaacagtgtt
tatagtccaaaaattactcaacaaaaagatacgtcgtcttcaagcgaagacgatcaattt
tacgaagattctgatgaagagggacacaatgtatcagataaaattgaagaaattaagaaa
aatagtgaaactcaggacaaccaaggtctgcacattttggatgaaatagcgatacgtcac
aaagctagtaatttccttagtagcgattcagaagatgatagtgatgcttatgacgatgaa
gaggaagaagaaaatgaaaagaaaaaaacgtttaaaaagaaattggaaaaggacaaagaa
aaagaatcagaaaaagataaaactaaggagaagacaaaaagtacaagttggaggagtgat
cctttgttacgccagcgatttgagatctcgttagattcagaagattcagatactggtgag
gaaaagaaatccaaaagtgtttcaaaaaagaaacaagaactagtcgaaacgattgaggat
gatttggatattgagatgccacaaagacaaaggaaaagaaaaaaatcgtattcatcgagt
ttcacagacgacgacaaagatatcaaaactgaactaagtgatgattttcagatgcccgca
tcctttaactcaaataaaacaatcatactattgtcatcgtcagatagcgacattgaattt
ataacggattcgcctataagaaacaaggcaaaatctaggaaaaaaaataaatcggagagt
gagaacgatgaagattctctcagaaagaaaggtcgtaaaaacattagagagatactttca
gacgatgttctagaagaggataccaagaaggcgattgaagaagaaaagcagcgtaacata
cgagtttctcaaaagcagcaattgatgtcaaattttctgtctcaatcgtcggaaaatttg
gaagaagagggacttattttggatgttgacagtgagacacagaaacccctgatagtggtc
aaccacaatttatcaaaaagacttaaaaaccaccagtcagaaggggtgaagtttatgtgg
agttcttgttacgaaagtgtagaacaaattaaacaagataacaaaggatctggctgtatt
ttggcacactgtatgggacttggaaaaacttttcaggtaatcactctcattcatactctg
tttaaataccaaaaagagacccgtacaaaatgtgtgttggtggtttgccccttgtctacg
gtgcttaattgggaaaacgagttcaaaattgcatttaacatcgcttctaactctaaaaga
cctatcgtgtatattctaggggatcaacaaaattcaacgtttagcaaggcttccagaata
aaacggtggcatgaccaaggcgggatactagtgatgggttacgaggcatactcttcagcc
cttaagactataagatattctcaaaatacccatgacaaaataaatgcagccttagttgat
ccaggccccgatttggtaattctcgatgagggacatttgcttaaaaacggcaaaaccagc
agaacgatcactcttatgcaaattaaaacgaaacgtcgcataattttgaccggtacaccg
atgcagaacaatttaaaagagtattatcatatggtgaacttcgtaaaaccgaatttactg
ggcagttggttggaatatagcaatcaattcgttaatccaattgtaaatggtcagtacgac
gattcaacggaagaagacgtacgaaaaatgaaatatagaagtcacgttcttaataaaaaa
ttaaaaagaacaatacagagattcgaagtctcagaattggagacgtatttaccccctaaa
ctggattatgttcttttcgtccaattacatcctgttcaagtacaattataccaagcgttt
ctggaaaacttaaatgtggacgtgatccaggcaggacgactcttcgctcattatcattac
cttcagaatgtttggtcccacccttacttgctggttcttcaagataaaatgaaaaacatg
acgaaagacaagaatatcaaggagattgatactatcgatctagatccggagattacgatg
gtcgaacaaaaaccaattgcgaccaactggtggtcgcgaattattcctaaagatgtgggg
acgaacatagagtatggttccaagttttacatcatgctatcgataattgaagaggcaatt
tcctgtggagacaaaattgtcgtgttttcgaacagtttgaatgaacttgatggtatcgaa
cactttttaaagttggtagggacaccgagttgtaaagtctggcggaataaaatagattat
tatcgaatggatggcaccataaagcctgatagtcgtatgagcctttgtatgtcgtttaat
aaccccaagaacacccaaaccaaagtatttttggtctcccataaagttggaggattggga
ttaaatttagttgctgcaaatcgtgttattttaatggacgtaaattggaatccgtcttat
gaaagtcaaagtatatttcgaacctatcgttttggacaaaaaaagacttgttacgtttac
cgtttagtatcaatgggaacgatggaagaagtcgtttatgaaagaagtgtaacaaaatta
gctgtagcaggccgtgtggttgacgaaagacaaatcagcagacattacaaaagtgacgat
ctacaaaaaatgtatagagcaaactttgatttgaatcaactaaggccaaatctaaacgtt
cctgaagacgtagttttgggcaaagtctaccagaaacataccaaagaactttttaaatat
cattcgcatcaagcattgctagaaaacttaccacacgaaagtcttacagaagaagaaatg
gagagggcgtggcttgaatttggaagagaaaatgaagctgcaagaaaattggaaattagc
aaacaatttatagaaaatgcaaaaaagaattcggttgatatacgatatcaaaaaaacatt
gaaactataaacgctcttgctgaagacgtggcaaacaaaggccctcttttaaattccacg
attatgagaaatggaaatttcctcaatattccaaacacgtcaatgtcagcatctttagtt
cctgctgcttgtcgtgcatttgccaaagaaaacttaaacaattttatatccagtcaaaag
acacttacacaaacactacctttgataagtaatgtttctagtgcttcacggaattcttcc
actcaagtgggtcagtttgaagaagtgttcgttcctactagatttggtgatgttgatgcc
aatgaaaacagagataatgatgttattgtacttgaagataattcatggtacaatcctagt
cctgcatctgttgataataataaaagtagtgaatattctaaaactgatggtcgaatcaaa
gcatctgagcaagttccaaataagaatcggtttcctccatctaatcgtataaacatcaac
cttcttagaaaaccagcttcaacgcgactagttccacgtgctactaataccatgatctcc
caggaggtgatagacgtggaaaaccactcgcttttggcaaagcttgcaaaaaatcacgac
ataagtgtatcgcaaattttgaaaccgaaaattccggaagttgatgatcagactgacaaa
ggaaatacttctaacaactgtgataatgtggtggagacaagtaacgttttttatgcaact
ttcctagtttga
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