Agrilus planipennis (emerald ash borer): 108734491
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Entry
108734491 CDS
T07419
Name
(RefSeq) protein SMG7-like
KO
K14409
protein SMG7
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108734491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108734491
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
108734491
mRNA cycle factors
Common to processing body (P body) and stress granule
108734491
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
zf-MYST
TPR_2
Motif
Other DBs
NCBI-GeneID:
108734491
NCBI-ProteinID:
XP_018321584
UniProt:
A0A1W4WC78
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
MKCKAAIQALQKADALKASMSQKHDLINDSKPWNDQQQLRTIYHEVLILDLEYALDKKIE
QELWMLGFKNYINTLQEIIRDVKNPQRSDAQALLSWCLQTAFGFYSSLLQEFCALYDLDM
PFHKLLMMYEQTRPNTSKDFNKAKNSSCLYMCQYCLVHLGDIARYQNHRKQAESYYKYSI
QISPTSGQPYNQLALLETSHGDKLATVYYYIRSIAVKNPFHAATANLLKTLSTVVEKEQS
LSEVQTKMSVNEFIQKFLKAQGLLLFATDLEQVEIIVKSINATLTALIATQSFTMEQLLR
MVVINLYQLKNLQKLENEKNRDVNELTEDEKKIRNFVLELLAGSLSAFLLPVYTLKHDKT
LLDYYALPALTLILYWIKIEPEVLQETVFTNWPQIWPSLCKLLNSLQEITAEFDCKPYEN
VLLYEDRELQGFLPFSEIFKKYKSKVDKEDYVDKEKTIRAKRLIEYGTWLTSVEVNSKKL
INNKKGSDEDSIVFEPQCTQPDPTSKLLEEMKSFSLSEVNNDNNKSKEKRSGILKPQGSL
EKAREEREQLLLASETGAVSHASSSSSVSSISANSNLKVDSFKQKRVRQNVALQSIFKKI
EESKQVKFSVEPEKEKIESIPKKQTSTDSSVPPQNEMFWTSIKGLNEKPVDYPKSSYQYF
PNTSFDIKMPMSSFVTDSGMKPMQNFGNYSETMHGSGSFSLPPQTLSNSSQSLPPLNNSN
FNSSNFPNNFGSNNPNLVGFGSSSHNFNTNMPPSYRQQGNYPPNNPNIPYQNISHYPQFS
STWKTDSQQVPPWSNWPNSGGNQPSQNQQDNYQLNYQYQGNMPYSFSNIAPNNMQKKQDT
SFNSPWNPMPPSRPVNYDGSNMGNNQSLSLRQAMLKEAKNVAGMQMPPPPPPKTGPPEEK
MYTPPGYSLFNSGGWSPNLSGQFRNTVPPDMLMNQHSLFAGQAPQSLQQLLEQQNKFKNN
S
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcaaagcagcaattcaagctttacaaaaagcagacgcattgaaagcgagcatg
tctcaaaaacatgatcttatcaatgattccaagccatggaatgatcaacaacagctcagg
acaatatatcatgaagttttaatcctggacttagaatatgcacttgacaagaaaattgaa
caagaattgtggatgcttggttttaaaaattacatcaacactttacaagaaattataaga
gatgttaaaaaccctcaaagaagtgatgctcaggctttgttatcatggtgtttacaaaca
gcctttggattttattcatcgcttttacaagaattttgtgcactttacgatctggacatg
ccctttcacaaactgcttatgatgtatgaacaaacaagacctaacacatctaaggatttc
aataaagcaaagaattcgtcatgtttatatatgtgccagtattgtcttgtacacctagga
gatattgccaggtaccaaaaccacaggaaacaagcagaaagttattacaaatactcaata
caaatttcaccaacaagtggacaaccttacaatcaattagccctgttggaaacaagtcat
ggagataaattggcaactgtttattattatataagaagcatagctgttaaaaatcctttt
catgctgccacagccaatttattaaaaacattatcaactgtagtggaaaaagaacagtcc
ctaagtgaagtacagacaaaaatgagcgtgaatgaattcattcagaagtttttaaaggcc
caaggactgctcctgtttgcaactgatttggaacaagttgaaataattgttaaaagtata
aatgccactttaacagcacttatagcaactcaaagtttcacaatggagcaattacttcga
atggttgtcattaacctgtaccaattaaaaaatttacagaaattagagaatgagaagaac
agagatgtcaatgaattaactgaagatgaaaaaaagatcagaaattttgttttggaatta
ttagctggttcattaagtgcatttcttttgcctgtatacactttaaaacatgataagacc
cttttagactattatgccttacctgcactaactctgattctttattggattaaaatagag
ccagaagttcttcaggaaactgtttttacaaactggccccaaatatggccaagtttgtgc
aagcttttgaacagtctgcaggaaattacagcagagtttgattgtaaaccatatgagaat
gtgcttttatatgaagatagagaattgcaaggcttcttaccattctccgagatatttaaa
aaatacaagtctaaagtggacaaagaagattatgtggataaagaaaagaccattagagcc
aaaaggttgatagaatatggcacttggttgacttctgttgaagttaacagcaaaaaactt
attaataataagaagggtagtgatgaggatagtatagtttttgaacctcagtgcactcaa
cctgatccaacatcaaaactgcttgaagaaatgaagtcgtttagtctctcagaagtcaac
aatgacaataataaaagtaaagaaaaacgcagtggtattttaaagccacaaggatcccta
gagaaggcaagagaagaaagggagcagcttttgctagcatctgaaacgggggctgtatct
cacgcgagcagtagcagttctgtgtccagcatatctgctaattctaacttaaaagtagat
tctttcaaacaaaaaagggttcgtcaaaacgtcgcacttcaaagcatcttcaagaagatt
gaagaaagcaaacaggttaagtttagcgtggaaccagagaaggaaaagatagaatccata
cctaaaaaacaaactagtacggactcgtcagtccctccacaaaacgaaatgttctggact
tcaatcaagggccttaacgaaaaaccagttgattacccaaaaagctcgtatcaatacttc
cccaacacttcgtttgatatcaagatgcccatgagttctttcgttacagattctggaatg
aagcctatgcaaaattttggaaattactcagaaaccatgcacggaagtggtagcttctct
ttaccgccacaaacattgagtaattcgtcgcagtctttaccacccttaaacaattcgaac
tttaattccagcaattttccgaataatttcggttcaaacaatccaaacctggtcggtttt
ggatctagcagtcacaattttaacaccaacatgccaccatcgtatcgtcaacagggcaac
tatcccccgaataatccaaatatcccttaccaaaacatcagccattatccccaattttcg
agcacatggaaaaccgattcacaacaggtgcccccgtggtccaactggcccaattccggc
ggcaatcagccgtctcagaaccagcaagacaattatcagttgaactatcaatatcagggt
aatatgccttattcgttttcgaacatagccccaaataacatgcaaaagaaacaagatact
tcgtttaattccccatggaaccctatgcctccttcaagaccggttaattacgacggcagc
aacatgggaaacaaccagagtttgtccttacgacaagccatgctcaaagaggccaaaaac
gtcgctggtatgcagatgcctcctccacctcctcctaaaactggccccccggaggagaag
atgtacacccctcctggatattctttattcaactcaggaggatggtctccaaatttatct
ggacaatttcgaaacacagttccccctgatatgctcatgaatcagcattcattgttcgca
ggacaagctccacagtccttacaacaactattggaacaacaaaataagtttaaaaacaac
agttga
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