KEGG   Agrilus planipennis (emerald ash borer): 108734689
Entry
108734689         CDS       T07419                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
apln  Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:apln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:apln03041]
    108734689
Spliceosome [BR:apln03041]
 Complex B
  Other components
   Complex B specific factors
    108734689
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st LisH_TPL WDR90_beta-prop_4th NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Ge1_WD40 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_SCAP WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_LRRK2 VPS8_N Beta-prop_WDR75_2nd Beta-prop_NOL10_N KNTC1_N Beta-prop_WDR11_2nd zf_topless LisH_WDR26
Other DBs
NCBI-GeneID: 108734689
NCBI-ProteinID: XP_018321840
UniProt: A0A1W4WP77
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLIRTLQTLQEETGVSLNTVDSVDGFCNDINNGHWDTVL
KVIQSLKLPDKKLIDLYEQIVLELIELRELGAARSLLRQTDPMIMLKQNEPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAISHALSGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAIREQEDEQYPTQMAKQIKFGQKSHVECARFSPDGQYLVTGSVDGIIEV
WNFTTGKVRKDLKYQAQDNFMMMEHAVLCMAFSRDSEMLVTGSQQGRIKVWRISTGQCLR
KIEKAHTKGITCLQFSRDNSQVLSSSFDCMIRMHGLKSGKVLKEFRGHSSFVNEVVFTQD
GHNILSASSDGTVKVWSIKTTECISTFKALGASDIPVNNIHNFPKNPEHFVICNRSNTVV
IMNLQGQIVRSFASGKREGGDFVCSSVSPRGDWIYCIGEDMVLYCFSTTSGKLERTLNIH
EKDVIGIAHHPHQNLICTYSEDGLLRLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtccatcgaaatagagtctgcagatgtgattcgtctcatacagcaatatttaaaagag
tcaaatctaataaggactttacagactctccaggaggaaactggagtatcactgaacacg
gtagatagtgtagatggcttttgcaatgacataaataatggccactgggacactgttttg
aaagttattcagtctcttaaactgccagataaaaagttaatagatttatatgagcaaatt
gttttggagcttatagagctgagggaattaggggcagctaggtctctcctcagacaaact
gatcctatgattatgttaaaacaaaatgaacctgaacgttacatacatctagagaattta
ttggctagatcatactttgatccacgtgaagcttatcctgatggtagtagtaaggaaaaa
cgtagggctgctatttcccatgcattatcaggagaagtatctgtggtaccctcctcaagg
ttgttagctcttcttggacaggctctcaaatggcaacaacatcaaggactattgccccca
ggtactacaattgatttgttcagaggaaaggctgctattagggaacaagaagatgaacag
tacccaacacaaatggcaaaacagattaagtttggtcagaaatctcatgtggaatgtgcc
agattttctcctgatggacaatatttggtaactggaagtgttgatggtattatagaggta
tggaactttaccactggtaaagtaagaaaggatttgaagtaccaggcacaggataatttt
atgatgatggaacatgcagttctgtgcatggcattttcaagggacagtgaaatgttagta
acaggttctcaacagggaagaattaaagtttggagaataagcacaggtcaatgtcttcgt
aaaattgaaaaagctcataccaaaggcattacttgtctacaattttcaagggataacagt
caagttttaagttcttcttttgactgtatgattagaatgcatggcctaaaatctggtaaa
gttcttaaagaatttagggggcacagttcttttgtaaatgaggtggtttttacacaagat
ggtcataatattttaagtgcatcttctgacggtactgttaaggtttggagtattaaaacg
accgaatgtattagcacttttaaggctttaggggccagcgacattcctgtaaataatata
cacaatttcccaaaaaatcctgagcattttgttatttgcaatcgaagcaatactgtggtc
ataatgaacttacaaggacagattgtgaggtcttttgctagtggaaaaagagaaggtggt
gactttgtttgttcttctgtatcccccaggggtgattggatctattgtataggagaagat
atggttttgtactgtttttcaacaacatctgggaaattagagagaaccttgaatattcac
gaaaaagatgtaattggtattgctcatcacccccatcaaaatctaatttgtacatacagt
gaagatggattattaagattatggaaaccataa

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