Entry |
|
Name |
(RefSeq) nuclear pore complex protein Nup88
|
KO |
K14318 | nuclear pore complex protein Nup88 |
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Organism |
apln Agrilus planipennis (emerald ash borer)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:apln00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108734822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:apln03019]
108734822
Messenger RNA biogenesis [BR:apln03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108734822
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
737 aa
MSSTDYLNINDHKIFKNLRKTLPKSIDKVERLLTVNDDILYTWDFQDNCVLTLNIKAARS
KEKDNVSHQTLLPNYPLLFTPEFLTTNSSNTLLAVAGPAGVLIMEIPARCPPYGAFAGNK
EVVYCRSHSLEERLLCCGNNVEVHQVRFHPGSPGDNHVVVLTSDNFLRFYQIINATALIL
DKYQLGRSPTSVMPCSKVYMLTDLGETAIDFDFGPPELEKQNAIKFREVADKETQSFVSY
KGWSRHSHKFKEEKKIFSTANDSVQEKNLKNVANKWGKLQWPIYLLYGNATVCTITIPLN
EKSKPKVRGPLPIIPDGEITYKDDACALLCLKTTPSILCLATSNGNVYHLVVLPETQQPQ
CKSMDEYLHRHDRSLYVYEKIELELGLATCQPSSVYICPIFLYPDDSRSDRYFAIHETGI
HSVTVPSANKLQKFFSGPEDDLENVVNERSSADYLLCTKIANSDNKNPVIGFALYYNPPS
VLVLLSNGQLVVLSLAPSLIHNYGDIDYDNIDNLDSPLKKMLREPFDVYVQRILKQAKNQ
PILKLSGGNHTQQECYELLQRASQSFRENHFKHHQKAIEEIEKRVKTLNLLKNYQLKEVD
RMQRERLMLQEKAGYLAEKYEDIKDKQEELTKRCHQLLLMVAEKKTELSEAEKKFLEELK
QASKKTELYLSTIDRLKKQQKYQDVQMENWKNQNTHKETGLGSVQSSTIRSNLQDMSNQI
TNIIKEINEYKTVLGIK |
NT seq |
2214 nt +upstreamnt +downstreamnt
atgtcttcgacggactatttgaacataaatgatcacaaaattttcaaaaatttgcgtaaa
actttaccgaaaagtatcgataaagtggagagactattaacagtgaacgacgatatttta
tacacatgggattttcaagataattgtgttctaaccttaaacatcaaagcagctcgaagt
aaagaaaaagataatgtttctcatcagacacttcttccaaactatccattgctgtttacc
ccggaatttcttacaacaaattcgagtaacaccctgctggccgtcgctggtcctgcaggc
gtactcatcatggaaattccagcaagatgtcctccatatggggcattcgcgggcaacaaa
gaggtcgtctactgtcggagtcacagtttagaggaaagacttctgtgttgtggcaacaat
gttgaagtccaccaagttagatttcatccaggaagtcctggtgataatcacgttgtcgtt
cttacaagcgataattttttacggttttaccaaataattaatgccactgcactgattctc
gacaaatatcagttgggacgaagtcccacatccgtcatgccctgcagtaaagtttacatg
ctaactgatttgggtgaaacggcgatcgatttcgactttggaccgccggaattggagaag
caaaatgctatcaaatttcgtgaagttgctgataaagaaacacaatctttcgtctcgtat
aaaggatggagcagacattcgcacaaattcaaagaagaaaagaaaattttctccactgca
aacgatagtgttcaagagaagaacttgaaaaatgtcgccaacaaatggggaaagttacag
tggcctatctatctcctttacggaaatgctaccgtttgcactatcacaatacccctaaac
gaaaaatcaaaacccaaagtacgagggcctttgcctataatacctgatggtgaaataacg
tacaaagatgatgcttgtgccttactatgtttaaaaacaactccttcgatactttgtctt
gcaacgtcaaatggaaacgtttaccatttagttgttctaccagagacccaacaacctcag
tgcaaatctatggacgaatatttacatagacacgacagatctttgtacgtgtatgaaaaa
atcgaattggaattgggtttagccacttgtcagccgagtagcgtgtacatttgtccgatt
tttttatacccagatgattcgaggagtgacagatattttgctatacatgaaacgggaata
cattctgttacagttccatctgcaaataagttacaaaagttttttagtgggcctgaagat
gacttggaaaacgttgtaaacgaacgtagctcagcagactaccttctatgtacaaagatt
gcaaattcagataacaaaaatcccgttataggcttcgcattgtattacaaccctccaagt
gttttagtacttttatcaaatggacaattagtcgtcttatcattagcgccttcattgata
cacaattatggtgacattgattacgataatatagataacctggattcccctctgaagaag
atgttacgagaacctttcgacgtatacgttcaaaggattttaaaacaagccaaaaaccag
ccgattctaaaattatctggcggtaatcacactcaacaagaatgctacgagttgctccaa
cgcgcctctcagtcgttccgagagaatcacttcaaacaccatcagaaggccatcgaagag
atagaaaaaagagtgaaaacgttaaatttgcttaaaaactatcaactcaaggaagtcgac
cgtatgcaaagagaacgcttgatgttgcaagaaaaggcaggttatctagccgaaaaatac
gaagatataaaagataaacaagaagaacttacaaaaaggtgccaccaattgcttttgatg
gtggctgagaaaaagacagaactttcagaagccgaaaagaagtttttagaagaactaaag
caagctagcaagaaaactgaactttacttaagtacaatagatcgcttgaagaagcagcaa
aagtaccaagacgtgcagatggaaaattggaaaaaccaaaatactcataaggaaacaggg
ttgggctcggttcagtccagcacaataagaagtaacctacaggacatgtcaaatcaaata
acaaacataataaaagaaataaacgagtacaaaacagtcctgggaattaaataa |