Agrilus planipennis (emerald ash borer): 108734969
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Entry
108734969 CDS
T07419
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apln03009
]
108734969
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108734969
Ribosome biogenesis [BR:
apln03009
]
Eukaryotic type
Pre-60S particles
Helicases
108734969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
Phage_YunG-like
AAA_22
Motif
Other DBs
NCBI-GeneID:
108734969
NCBI-ProteinID:
XP_018322248
UniProt:
A0A1W4WQ56
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MVEEDITDQLKNFHEMELDDRIVKAVAKLGWVQPTLIQEKSIPLIIEGKDVLLRARTGSG
KTAAFAIPAIQKILNIKQTKYYQETRILILAPSKELCNQIFNVIKDLTDKCSRDVHCIDI
SPKVDLNVQKPLLVERPDIIVGTPARVLQHIKAGNLNVSKTLEMLIIDEADLVFSFGYES
ELKELLKHLPKIYQAVLASATLSADVKSLKSLVLNNPVILKLEEPDIAPSSQLTHYHLAA
EEMDKASILYALLKLHLIRGKTIIFVNTVDRCYKLKLYLEQFGIPTCVLNSELPATIRCH
SVNQFNQGIYDIIIASDEKSLEQPGDRKVKSSESQKSKRRKDKESGVSRGIDFQFVSNII
NFDFPLDVESYIHRAGRTARGNNQGSVLSFVSIKEQPMLNDVENHLRNGSDTSVIKTYQF
KLEEIEGFRYRAKDAWRAVTRIAVREARLKEIKQEIFNCQKLKSYFEDNPNDLKVLRHDK
ALHTVRVQQHLSDVPEYIVPPSLKNLTGLNKRKRKHWENFRPTENSALKYQKKKNNPLVA
MEFEGFKKDRNKDKKIKNKKGKVK
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggtagaagaagatataacagatcaactcaaaaattttcacgaaatggagttagatgat
cgcattgtaaaggctgttgctaaacttggttgggtgcagcctacccttattcaagaaaaa
tcaatccctctcattattgaagggaaagatgtattgctaagggctagaacaggatctggt
aaaactgcagcatttgccattccagcaatacaaaagattcttaatatcaaacaaactaaa
tattatcaagaaacacgaattttaatattagcccctagcaaggagctttgcaatcaaata
ttcaatgtaataaaagacctaactgataagtgctcgagagatgttcattgtattgatatt
tcacctaaagtggatttaaatgtgcaaaaaccacttttagttgaaaggcctgacattatt
gttggaactccagcaagagtactgcaacatattaaggcaggcaatttaaatgtttctaaa
acacttgaaatgcttatcattgatgaagctgacttggttttttcatttggatatgagtca
gaacttaaagaactgttaaaacatttgcccaagatatatcaggctgttcttgcctctgca
actctaagtgctgatgttaaaagtttaaagagcttagttctcaataatcctgttatttta
aaattggaggaacctgacatagctccatcatcacaactaacccattatcatttagctgca
gaagaaatggacaaagcatctatcctgtatgctcttttaaagctacatctcattagaggg
aaaacaataatttttgtcaacacagtggacagatgttataaattaaaactgtatctggaa
cagtttggtattcccacgtgtgttcttaattctgaacttccagctacaatacgttgtcat
tctgtaaatcaatttaatcagggaatttatgatatcataatagcatctgatgaaaagtcg
ttagaacagcctggagatagaaaagtaaagtcatcagagtcacaaaaatcgaaaagaaga
aaagacaaagaaagtggtgtctccaggggtatagacttccagtttgtatctaatattatc
aactttgatttccctttagatgtcgaatcatacatccacagggctggcaggactgccaga
ggaaacaatcaaggaagtgtgttatcctttgtaagcatcaaggaacagcccatgttaaat
gatgttgaaaatcatttaagaaatggttcagatacttcagtaataaaaacgtatcaattt
aaattagaagaaatagaaggatttaggtacagagcaaaagatgcttggagggcagttaca
cgaatagctgtcagagaggcaaggcttaaggaaattaaacaagaaatatttaactgtcag
aagcttaaaagttattttgaggacaatcctaacgatttaaaagtacttaggcatgataaa
gctttgcacacagttagagtacagcaacatctttctgatgtacctgaatacattgtgcct
ccttctttgaaaaatttaacaggcttaaataaacgcaaacgaaagcattgggaaaatttc
agacctactgaaaactctgcattaaaataccagaaaaagaaaaataatcccctggttgcg
atggaatttgaaggtttcaaaaaggatagaaacaaggataagaaaattaaaaacaagaaa
ggaaaagtaaaataa
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