Agrilus planipennis (emerald ash borer): 108735136
Help
Entry
108735136 CDS
T07419
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108735136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apln03019
]
108735136
Messenger RNA biogenesis [BR:
apln03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
108735136
U7-dependent histone pre-mRNA processing factors
108735136
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
PEX-2N
Motif
Other DBs
NCBI-GeneID:
108735136
NCBI-ProteinID:
XP_018322472
UniProt:
A0A1W4WPS5
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MTSIIKLQALSGALDESPPCYLLQVDEVRILLDCGWDEKFDFNVIKELKRHVHSIDAVLL
SYPDITHLGALPYLVGKLGLNCPIYSTIPVYKMGQMFMYDLYQSHYNMENFELFTLDDVD
AAFDKIIQLKYNQSISLKGKGYGLTVTPLPAGHMIGGTIWKIMKVGEEDIIYANDFNHKK
ERHLNGCELEKLQRPSLLITDAFNATYQQARRRARDEKLMTNILQTLRNNGNVLVAVDTA
GRVLELAHMLDQLWRNKESGLLAYSLALLNNVSYNVVEFAKSQIEWMSDKLMRSFEGARN
NPFQFKHLQLCHSMQELSKVPSPKVVLASMPDLECGFSRELFLQWCSYPNNSVILTSRTS
PGTLARDLIENGGNRTIDLIIKRRVKLEGAELEEFEKNEKSKKETVDKEDNSSSDSDDDI
EVSVISRGRHDIVIKQEGKISSGFFKATKKQAPMFPFKEEKIKCDDYGEIIRPEDYKMAD
IAPEGEENKENIVLKKEEEDFITDVTELPTKCIVLNRTVQVNAQVQFIDFEGRSDGESLL
KILSQLRPRRVIVVRGSPEDTATIQNHCRENVGARVFCPIRGETVDATSETHIYQVRLTD
ALVSQLRFQKGKDAEVAWVDAQVVVREGQTDAKRMSADDEPMEVDEDETKILTLEPLSGN
ASPHDTVFVNELKLSEFKQVLAKSNITSEFSGGVLWCCGGTVALRRIESGKIMIEGCLSE
EYYKVRDLLYQQYAIL
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattataaaattacaagctctttctggagctctagatgaatctccaccttgc
taccttttgcaagtagatgaagtgcgaattttactggactgcggctgggatgaaaagttt
gatttcaatgttataaaggaattgaagagacatgttcattcaattgatgcagttcttctc
tcatatcctgatataacccacttaggagctttaccatatctagtaggaaaactgggttta
aattgtccaatatattctacaatacctgtgtacaaaatgggccaaatgtttatgtatgat
ttatatcagtctcattataatatggaaaattttgaattatttactctagatgatgtagat
gctgcatttgataaaataattcaattgaagtataatcaaagtataagtctcaaaggtaaa
ggctatggattgactgtgacccctttacctgcaggccatatgattggaggtacaatttgg
aaaattatgaaagtaggggaagaagatattatatatgctaatgattttaatcataaaaag
gagagacatttaaatggttgtgaacttgagaaattgcaaaggccttcactcttgatcact
gatgcttttaatgctacatatcagcaagctagaagacgggctagagatgaaaaactcatg
acaaatatattacaaactcttcgaaataatggcaatgtactagttgctgttgacacagct
ggtcgtgttcttgaactggcacatatgttggatcaattgtggagaaataaagagtctggt
cttttagcctattcccttgccctactgaacaatgttagttacaatgtagtggaatttgca
aagtctcagattgagtggatgagtgataagctaatgagaagttttgaaggtgcaagaaat
aatccattccaatttaaacacttacagttatgtcatagtatgcaagaattatcaaaagta
ccaagtccaaaggttgtcttggcaagtatgcccgatttagaatgtggattttctagggaa
ttgtttctgcaatggtgttcttatccaaataacagtgttattttaacaagcagaacttca
cctgggactttagcaagagatttaatagaaaatgggggtaaccgaactattgatttgatt
ataaaaagaagggttaaattggaaggtgctgaattagaagaatttgaaaaaaatgagaaa
tcaaaaaaggaaaccgtagacaaagaagacaacagcagttcagactctgatgacgatatt
gaagtgagcgtaatatcaagaggccgtcacgacatagttattaaacaggaaggaaaaatt
tccagtggtttttttaaagcaacgaagaaacaagctcccatgtttcctttcaaggaagaa
aaaataaagtgcgacgattatggagagattattcgaccggaagattataaaatggcagac
attgctcctgaaggagaagaaaataaggaaaacattgttttaaaaaaagaagaagaagat
tttataactgatgtaacagaacttcctacaaaatgtattgtcttaaatcgtacagttcaa
gtaaatgctcaagttcagtttattgactttgaaggcagatcggatggagaatcgttatta
aaaatattgtcccaactgaggcccagaagggtaatagttgtccgaggatcccctgaagac
acagcaactattcagaatcattgtcgagaaaatgtgggagccagagtgttttgtcccatt
aggggagaaacggtcgatgctacaagcgaaacgcacatttaccaagttcgtttaactgac
gcgttggtttcccagttgaggtttcaaaaaggaaaagatgcagaagtggcatgggtggat
gcacaagttgttgtgcgtgaaggacagacagacgccaaacgaatgagtgctgacgatgag
ccgatggaagttgatgaagatgagacaaaaatactaactttggaaccattatctggaaat
gcttcaccccacgacacagtatttgttaatgagctgaaattatccgaattcaagcaagtt
ttagcgaaatcaaatattacttctgaattttcaggaggcgtactgtggtgttgcggtggt
acagttgcattgcgaaggattgaatccggaaaaattatgatcgaaggatgtctatcagaa
gagtattacaaagtacgagatttattgtaccaacaatatgctattttgtaa
DBGET
integrated database retrieval system
