Agrilus planipennis (emerald ash borer): 108735146
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Entry
108735146 CDS
T07419
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apln04121
]
108735146
Ubiquitin system [BR:
apln04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108735146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Hce2
Motif
Other DBs
NCBI-GeneID:
108735146
NCBI-ProteinID:
XP_025832441
UniProt:
A0A7F5R8Z5
LinkDB
All DBs
Position
Unknown
AA seq
1789 aa
AA seq
DB search
MLDWEEGDRFSFEDSDRFEEDSLCSWSSEPESVCNNWRGWKKPSVGSSSYTYGNNKKNGD
DKPVKVPPLTELAAKCVASHIPFELVERVYPPVPEQLQLRIAFWSFPDNEEDIRLYSCLA
NGSADEFSRGESLHRSHSVKDPLQIGFHLSASVQQLPRGAYNVAVTFDRRRISSCNCTCS
LSAYWCSHVVAVCLTRIHWPHLVTLRAPVSESLSRLHREQLQKFAQYLISELPQQILPTA
QRLLDELLGSQPSAINTVCGAPDPTAGASANDQTSWYLDEKALHDNIKKILIKFCVPAPI
VFSDVNYLSTTAPPAAAEWTSLLRPLRGREPEGMWNLLSIVREMFKRNDRNAIPLLEIIT
EECLACEQILVWWFNTKVALLNGGSGHGVSGGGKHNNVNSNSHASQHACSSLCDEIVILW
RLAALNPGLAPQERDMLHNQFTTWHMKIMEKVSRSSSNPSKTNKSWYLKMDMEIFTGFKP
AIEACYLDWDDYPMPGITYTEDTNPMYHCPFTCFRHTAENRTENVTQVNFSQAVLNNEHP
HTTRHGHHYHHGHHHHHHHVPRSRMTRFDFPDVMSMNPVEFPSHLQLERSRDGTRSSISS
EGFCENEDDVLKDSGIMLPGAYKSIDSDSQEGGGSDSASSSSSNGRNQVPNTKPENIQGT
SRTDWDDPTSRRPSKDESSSSSESPQSGDEYTVYFYNPKDVDNLSTSPKEPKAEDTDNRN
VFSNIKLADDPYDVLFARAEGLHAHGHSKEACLLGVKLAEELLANPPNLMIEIPPMPKRK
GKKQQVNPASHQLSCLASSTLAKCAFLCSVLAENSEYYHLAFRVGMFGLEMARPPASTKP
LEVKLANQESDLVNLLKRIPLGLKELKILREKAEQLKEGTLKSRGEALLPIMLASFVFDA
LVVPSLMGRDRSKVLSIRLPTDEALGFEAAVIALGMKANVSEADHPLLCEGTRRQRGDLA
IALLIFYKDDNWKVARIMDKLLDREVHQLIKTPIISSYYSNNPPLRSQYSNLKREECDKV
ISPLNSFMPSSDMMPSDMNCNSRPHSSTSAEVEAGMANLSLAANQMPSQAPPTQVTTRTK
ESRYKKRTYPSIPNQPSEAGAHFMFELAKTVLVKAGGNSSTSLFTPSTSQNHHGPHRALH
MCAFQLGLYALGLHNCASPNWLSRTYSSHVSWITGQAMEIGAAAISFLIETWEGHLTPPE
AASIADRASRGCDPNMVRAAAELALSCLPHAHALNPNEIQRAILQCKEQSDIMLEHACLT
VENAAKGGGVYPEVLFQVAQYWYELYVRHTPGGEQLLVENEIPHEPILLDPIVALVDLNV
ANCEAQQKQQAVPANQPPNMAPGAPAPPPQAQGAQVMASGGPVVVTTAPPPPYQHPSVTT
LAAPLGVSLPYAVAPYSFAVQSLHPHPHVTAYGGGPLHHHHHHHHHHPGVQMAPQPPPPT
AHVQMYHLPPPPPAAQFQYPPHTANQQQYHHQAGQAATFNGVSPGQQGGFTVPPGGTGPS
QYQMPPQGVPPNYQTGQPPAYNNMPVSTGGPIQQNIQYYGAAVTIAQAPNLHPPPVPAGA
PHMYPVSMPAPGGGPGPGSGPAPNNMSAQQPSVRPPPHRQTQQFSQAQLYYLLAAYRVGM
LAMETLARRVHDDRPQAKYARNPPYGEDVKWLLRISKHLGTHYLHQFCICAVNSIVSPFV
LHDVAIESAQYLSRNNPALVMQHLRTALAPLVQKCQQMYIQCMHQKLYHLMPNDYEEFVS
IVCSARAAFQITPEGSTQFKEWLQSIRRSKSCKKDLWTQINTALQANNK
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgttggactgggaggagggtgacagatttagttttgaggactcggaccgttttgaggag
gactccttgtgtagctggagctctgaacctgaaagcgtgtgcaacaactggcggggttgg
aaaaagccctcagtgggctccagctcgtacacttatggaaataacaaaaagaacggagac
gataagccggttaaagttccgcctttgacggagttggcagcgaaatgcgtcgcgtcccat
attccgttcgagctcgtggaacgggtgtatccgcccgttccggagcaacttcagctccgg
atcgctttctggagctttccggacaacgaggaggatatccggttatattcgtgcctggcg
aacggttctgcggatgagttctcgcggggcgagagtctgcatcggagtcacagcgtcaaa
gatccgttacaaattggtttccacttatcagcgagtgtccaacaattaccccgcggtgcc
tacaacgtggccgtgaccttcgaccgccgcagaatcagttcgtgcaattgcacttgtagt
ctctcagcctattggtgttcccacgtagtggccgtatgtctcacccgcatccactggcca
catctggtgacgctgcgggcacctgtttccgaatccttgtctcgtcttcatcgagagcaa
ctgcagaagtttgcccagtatttgattagcgagctgccgcaacagatcctaccgaccgcg
cagcggttgctggacgagctgttggggtcgcagccgtccgccataaatactgtttgcggc
gcccccgatccgacagctggggcttcggccaacgaccagacctcatggtacctagacgag
aaggctctccacgacaacatcaaaaaaatactgattaagttttgcgtccccgctcctatc
gttttcagcgatgtaaactacttaagtacgacggctccacctgcggcggccgaatggact
tctcttctgagacccctgaggggcagagagcccgagggcatgtggaacctcttgagtatt
gttcgtgaaatgttcaaacgaaatgatcggaacgcaatccctcttctcgaaatcatcaca
gaggagtgtctggcgtgcgaacagattttggtttggtggtttaataccaaggtggccctg
ttaaatggcggttcaggtcatggggttagtggtggcggtaaacataataacgtcaatagc
aatagtcatgcatctcaacatgcgtgttcgtcactttgcgatgaaatcgttatattgtgg
cgattggctgccctgaatcctggtctcgcgccccaagagcgtgacatgctccataatcag
tttacaacatggcatatgaaaatcatggaaaaagtaagtcggtcgtcttctaacccgtcc
aagacgaacaagagttggtatttgaaaatggacatggaaatatttaccggttttaaaccc
gcaatcgaagcatgctatcttgactgggacgattatcccatgccgggtatcacatatacc
gaagacacaaaccctatgtaccattgtccatttacttgtttccgtcatacagccgagaac
aggaccgagaatgtaacacaggtcaactttagtcaggccgttttgaacaacgaacaccct
catactaccagacacggtcaccattatcatcatggacatcatcatcatcaccatcacgtg
cccagatctcgaatgactcgtttcgattttcccgacgttatgagtatgaatccggtcgag
tttccgtctcatctgcaactggaacgttctagagatgggaccaggtccagtattagtagc
gagggattttgcgaaaacgaagatgatgtcctaaaggatagtgggattatgttacccggt
gcttataagtcgatcgattctgattcgcaagaaggcgggggttcggattccgcaagtagc
agtagtagtaatggcaggaaccaggtacccaatacaaagccagaaaatatacaaggtact
tctcgtacggactgggacgacccaacatcaagaaggccctctaaagacgaaagctcttcg
tcatccgaatcacctcaaagcggagacgaatatactgtatatttctacaatcctaaagat
gtggataatttgagcacaagtccgaaagaaccgaaagcagaagatactgataacaggaac
gtcttttctaacatcaaattggcggatgatccttatgatgtactttttgcaagggcggaa
ggactacatgctcacggtcatagtaaagaagcgtgtcttttgggtgttaaactggccgag
gagcttcttgcaaatcctccgaatcttatgatcgaaattcctccaatgccaaaacgtaaa
ggtaaaaagcagcaagtgaaccctgcgtcgcatcaactcagttgcttagcgtccagcacg
ctcgccaaatgcgcgttcttgtgtagcgtgttggctgaaaactcggaatattatcatttg
gcatttcgcgtgggcatgtttggtttagaaatggcacgtcccccggcaagcactaagcct
ttggaagtgaagctcgccaatcaagaatctgatctcgttaatttgctaaaacgaatacct
cttggcctcaaagaattaaaaattctacgcgaaaaggcggaacaattaaaggaaggaacg
ttaaagtcacgaggcgaagcattacttccaatcatgttggctagttttgtctttgacgcg
ttagtggttcctagcttgatggggcgggatagatccaaagttctctcaatccgtttacct
acagacgaagcccttgggtttgaagcagctgtaattgctctagggatgaaagccaacgtt
tccgaagcagatcatcctttattgtgtgaaggaaccagacgccaaagaggagatttagcg
attgcgctgttgatattctataaagatgacaattggaaagtagctcgaatcatggataag
ctactagatcgagaagttcatcagttgatcaaaacacctattataagctcatattattcg
aacaatcctcctcttcgaagccagtattcaaatttaaagagagaagagtgtgacaaggtt
atttcaccgttaaattcattcatgccatcttctgacatgatgccctcagatatgaattgt
aatagtcgtccgcatagctcaacgagcgctgaggtggaggcaggcatggccaatttaagt
ttggctgcaaatcaaatgccttctcaagctccacccacacaggtaactactcggacgaag
gagtcccgctacaaaaaacgtacatatccttcgattccaaatcagccttctgaagctggt
gcccatttcatgttcgaattggctaagaccgttctggtaaaagctggtggaaacagtagc
acatcgttgtttacgccttccactagccaaaaccatcatggtcctcacagggcattgcat
atgtgtgcattccaactaggactttatgctcttggactacataattgcgctagtcccaat
tggcttagtaggacttattcatctcatgtgtcttggataacaggtcaagcaatggaaata
ggggcagctgctatatcgtttttgatagaaacatgggagggtcatctaacaccacccgag
gctgcaagtatcgccgatcgtgcatctcgcggctgtgatccaaatatggttcgtgctgct
gcagaattagctctgtcctgtctgccacatgcacatgcgttaaatcccaacgaaattcaa
agagcaatactgcagtgcaaagaacaaagcgatattatgctggaacacgcatgccttact
gttgaaaatgccgctaaaggtggcggtgtttatccagaggttcttttccaagtggcgcag
tattggtatgaattatacgtgcgtcatacccctggaggcgagcaattgctcgtagaaaat
gaaatacctcacgaacccattctccttgatcccattgtcgcacttgttgatcttaacgtt
gcaaactgtgaagcgcaacagaaacagcaagctgtacctgcaaatcagccccccaatatg
gcaccaggggctcctgctcctcctcctcaagcccagggcgcacaagtgatggccagtggt
ggaccagtagtcgttacaactgctccgccacccccataccaacatccttctgtaacaacc
ttggccgccccgttgggagtttctcttccatatgccgttgccccatatagtttcgcggtc
caaagtttacatccacatcctcatgtgactgcatacggaggaggtcctttacaccaccat
caccaccatcaccatcaccatccaggtgttcaaatggcacctcaaccgcctccgccgacg
gcgcatgtgcaaatgtatcaccttccgccacctccgccagctgctcaatttcaataccca
ccgcacacggctaatcaacagcaatatcatcatcaagcaggtcaggctgcaacgtttaat
ggagtttctccggggcaacaaggaggattcacagtaccacctggtggaacaggcccgtct
caatatcagatgcccccgcaaggcgttccacccaactatcagactggtcagcccccggca
tacaataacatgcctgtcagcactggtggacccattcaacaaaacattcaatattatggt
gcagctgttacgatagcgcaagcacctaatcttcatccaccgccggtgcctgcgggagct
cctcatatgtatccagtgtcgatgcctgcccctggcggaggccccggcccaggttcgggt
cctgcacccaacaatatgtcagcccaacagccttccgtcaggcctccacctcaccgtcag
acacagcaattcagtcaggcgcagttatattacctattagctgcttacagggtgggcatg
ttggctatggagactttagcaaggcgagtgcacgacgatcgacctcaggccaagtatgcc
aggaaccccccttacggagaagatgttaaatggctgttgcgtatatcaaaacacctgggc
acgcattatcttcatcagttctgtatttgtgccgtcaactctattgtaagtccgttcgtg
ctacacgatgtggcgatcgaatctgctcaatatctatctcgtaataatcctgccctcgtg
atgcagcatcttcgaacggcacttgcgcccctggtacagaagtgccagcagatgtacata
cagtgtatgcatcagaaattgtatcatcttatgccaaatgattatgaggagtttgtaagc
atcgtatgttcggctcgtgccgcctttcaaattacgcccgaaggaagcacccaattcaag
gaatggcttcagtctattagaagatcgaaatcctgcaagaaagatctctggactcagata
aatacagccttgcaggcgaataataaatga
DBGET
integrated database retrieval system
