Agrilus planipennis (emerald ash borer): 108735595
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Entry
108735595 CDS
T07419
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
apln
Agrilus planipennis (emerald ash borer)
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
apln04040
]
108735595
Ion channels [BR:
apln04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108735595
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108735595
NCBI-ProteinID:
XP_018323110
UniProt:
A0A1W4WSV1
LinkDB
All DBs
Position
Unknown
AA seq
1218 aa
AA seq
DB search
MPNLSFLLNLFRSWRIGENIQQEQQEKLDSPVINIVTVLDDNQEKIIAPTIKHSTVLSKH
KNEQNWFWNAYRKIMPSMDEMQKTSNDMSELQSMLPTIVTVHRPSLVVRNSEDITGGVCF
MRDSPYRILKAAESGNLEAFQKLYFSDQTRLTIKDTRGRTAAHQAAAKNKVEILQFISAH
DGDFNVQDNVGNTPLHVAVENESLEAVDFLLLKGVKTDILNDKKQAPIHLVTELNKVAVL
EVMSKHKSKIDIQQGGEHGRTALHIAAIYDHEECARILITEFDACPRQPCNNGYYPIHEA
AKNASSKTLEVFLQWGESRGCTRDEMISFYDAEGNVPLHSAVHGGDIKAVELCIKSGAKI
STQQYDLSTPVHLACAQGAKDIVKLMFKMQPEEKMACLASCDIQKMTPLHCAAMFDHPEI
VEYLVTEGADVNAVDKEKRSPLLLAASRGGWKTVNTLIRLGADINIKDVNRRNVLHLVVM
NGGRLEQFAAEVSKCSYGRYNTARQLLDSEKGTFIINESDGEGLTPLHIASKQGHTRVVQ
LLLNRGALLHRDHNGRTPLHLAAMNGYTQTIELLLSVHSHLLDQLDKDGNTALHLATMEN
KPNAIALLLSMNCKLLYNKIQMSAIDYAIHYKFPEAALAMVTHEDRAEEVMTLRSDKHPC
VTLALIASMPKVFEAVQDKCITKANCKKDSKSFYITYSFSCFECPQFYADMDGKTGEAVN
ISQPIPLPALNAMVSHGRVELLAHPLSQKYLQMKWNSYGKYFHLANLLFYSIFLVFVTLL
SSQLMENDDDEDLQHYKPVENERLYVYTGQNENKTDLTYEEYWEKTKNAILHVKTTPFMY
TGAVVITVYLMVNTIREVIQIYQQKYNYFLDPTNLVSWMLYISATITVIPLSSSSVTELQ
FSCASLTVFLSWFNLLLLLQRFDQVGIYVVMFLEILQTLIKVLLVFSILIIAFGLAFYIL
MSKGEHLSFKTVPMSLIRTFSMMLGEIDFLGTYVQPYYLKEEQRYLPFPMPAFFILCVFM
VLMPILLMNLLIGLAVGDIESVRRNAQLKRLAMQVVMHTELERKLPKILLERIDKRELVE
FPNESKCKLGFLDCIIRKWFGNPFSDDGTKRRYKGLPAIRWRQCGLDMVMESGEDYLMSE
LEKTKRKLRDISSLLETQQQLLRLIVQKMEIKTEADDVDEGVSPNDLKPLITTSSKWTSP
KIRKKLQSALSFTKGNSN
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgccaaatttgtcattccttctaaatctattcagatcatggcgaataggagagaacata
caacaagaacaacaggaaaaactggactcgcctgttattaacattgtaactgtattggac
gacaatcaagaaaagattatcgcccctacaataaaacattctactgtcctatcaaaacat
aaaaatgagcagaattggttttggaatgcgtatagaaaaataatgccatccatggacgaa
atgcagaagacttccaacgacatgtccgaattgcagtcaatgcttccaaccattgttaca
gtacacaggcccagtcttgtggttagaaacagcgaggacattacaggaggtgtatgtttc
atgcgcgatagtccctatcgcattttgaaggctgccgagagtggaaatttagaagcattt
caaaagttgtatttttccgaccaaacgcgtttgacaattaaagataccagaggaagaact
gctgctcatcaagctgcagcgaaaaacaaggtggaaatactccagttcatttcagcccat
gacggagattttaatgtacaagataatgtcggcaacaccccactacatgttgctgtggag
aacgaatctttagaagcagtcgacttcttattgctaaaaggtgtgaaaacagatattcta
aatgataagaaacaagctccaattcacctagttactgaactaaacaaggttgctgtgttg
gaagtaatgagtaaacataaaagcaaaatagacatacagcaaggaggcgaacatggtcgt
accgccctccatattgcagctatatacgaccacgaggaatgtgcgaggattctaattaca
gagttcgacgcttgtccaaggcagccgtgtaataatggttactaccctatccatgaagct
gctaagaacgcttcttcaaagaccttagaagtatttttgcaatggggtgaatcaagaggt
tgtactcgggatgaaatgatatcattttatgatgcggaaggtaatgtaccccttcattcg
gcagttcatggaggtgatataaaagcagtggaactttgcataaaatcaggtgcaaaaatt
tctactcaacaatacgatctgtcaacaccggtccatctggcttgtgctcaaggggctaag
gatattgtaaaattaatgtttaaaatgcaacctgaagaaaagatggcctgtttggcatct
tgcgatatccaaaaaatgacaccactacattgtgcagcaatgtttgatcatccagaaatt
gttgaatatttagttactgaaggcgccgatgttaatgcagttgataaagaaaagagatct
ccgcttttattagcagcatctaggggtggttggaagacggtcaatacccttataaggctt
ggagcagacattaatattaaagatgtaaacaggagaaacgttttgcacttagtggttatg
aacggcggacgactagaacaattcgccgctgaagtaagcaagtgtagttatggtcgttac
aatacggcaagacaactactggattcagagaaaggaacgtttattattaacgagagtgac
ggggaaggtttaacaccactccatattgcttctaaacaaggacacactagagttgtccaa
ttattactgaatcgaggagctctacttcatagggatcacaatggacggacacctttacat
ttggccgccatgaacggttatacacaaactattgaattacttctatccgtacattctcat
cttttagaccaattagataaagatgggaatactgcactacatttagctacaatggaaaat
aaaccgaatgccattgcattactgctttcgatgaattgtaagctgttgtacaacaaaatt
caaatgagcgctattgattacgccatccattacaaatttcctgaagctgcactagcgatg
gtaactcatgaagacagagctgaagaagtgatgacgctaagatctgacaaacatccttgc
gtaacccttgctctaatagcttccatgccaaaagtcttcgaggcagttcaagataaatgt
ataacgaaagccaactgcaaaaaggactccaagtcattttatattacctacagcttctcc
tgtttcgaatgtcctcaattttacgctgatatggatggaaaaactggagaagcagtgaat
atatcacagccaatacccctccctgccctaaatgcgatggtgtcacatggaagagtagaa
cttttagctcacccactgagtcaaaaatatcttcaaatgaaatggaattcgtatggaaag
tactttcatttggcaaatttacttttctacagtattttcttggtttttgttactctctta
tcttctcaacttatggaaaatgatgatgatgaggatttgcaacactacaagccagtagaa
aacgaaaggttgtatgtttataccggtcaaaatgaaaacaaaacagatttaacctatgag
gaatattgggaaaaaacgaaaaatgccatactacacgttaaaacaacaccttttatgtac
actggagcagttgtaatcactgtttatctgatggtaaacactattcgcgaagtaattcaa
atttaccaacaaaaatataattactttctggatccaacgaatttagtttcgtggatgctt
tatatctctgctacaattacagtaattccactgtccagtagcagtgtgactgaacttcaa
ttttcctgcgcctctttgactgttttcctaagttggtttaacttattgttgctgctacaa
cgttttgatcaagttggaatttatgtggtcatgttcttggaaatattgcaaacactgata
aaagttttacttgttttctccatattgataatagcctttggactcgcgttttatatctta
atgtctaagggcgaacacttatcgtttaagacagttccaatgtcccttattaggacattt
tccatgatgttaggagaaatagattttttgggcacatatgtacaaccatactacttaaaa
gaagaacaaaggtacttgccgtttcccatgccagctttctttatactgtgtgtatttatg
gtactaatgcccattctattaatgaacttgcttatcggtttggcggttggtgatatcgaa
tccgttcggagaaatgctcaattgaaacgactggcgatgcaagttgtaatgcatacagaa
cttgaacgaaaacttcccaaaatattattggaaagaattgataaaagagaattggtcgag
tttcctaacgaaagcaaatgtaaacttggttttctggattgtataattagaaagtggttt
ggaaatcctttttccgatgacggaacaaaacgaagatacaaagggctaccagccatccga
tggcgacaatgcgggctggacatggttatggaaagtggtgaagactatttaatgtcagag
cttgagaaaaccaaaagaaagctcagagatatatcgtcattattagaaacacagcaacaa
ttacttcgcctaattgtacaaaaaatggaaattaagactgaggcagatgatgtagacgaa
ggtgtttctcccaatgatctcaaaccattaataacaacttctagtaaatggacatcacca
aaaatacgtaaaaaactacagtccgctttaagctttacaaaaggaaatagtaattag
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